RNA–Protein interactions for RNA: ENST00000464255.1

CTDSP1-206, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-206ENST00000464255 RCOR3Q9P2K3 495 aaPredicted RBP13.15□□□□□ -0.3
CTDSP1-206ENST00000464255 SPASTQ9UBP0 616 aa13.15□□□□□ -0.3
CTDSP1-206ENST00000464255 APOBEC3BQ9UH17 382 aaKnown RBP13.15□□□□□ -0.3
CTDSP1-206ENST00000464255 CLCA2Q9UQC9 943 aa13.15□□□□□ -0.3
CTDSP1-206ENST00000464255 PCDHB1Q9Y5F3 818 aa13.15□□□□□ -0.3
CTDSP1-206ENST00000464255 PCDHGC4Q9Y5F7 938 aa13.15□□□□□ -0.3
CTDSP1-206ENST00000464255 ADAMTS20P59510 1910 aa13.15□□□□□ -0.3
CTDSP1-206ENST00000464255 COL27A1Q8IZC6 1860 aaPredicted RBP13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 FASNP49327 2511 aaKnown RBP13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 ANKRD36A6QL64 1941 aa13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 A0A087WV48 116 aa13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 A0A1W2PNU3 283 aaPredicted RBP13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 EME2A4GXA9 379 aaPredicted RBP13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 TMEM110-MUSTN1A8MSY1 372 aa13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 A8MX80 341 aa13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 H3BM21 787 aa13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 TLX3O43711 291 aaPredicted RBP13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 LZTS3O60299 673 aaPredicted RBP13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 PROSCO94903 275 aa13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 ALPPL2P10696 532 aa13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 TGM2P21980 687 aa13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 TRIM23P36406 574 aa13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 HK3P52790 923 aa13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 CDH6P55285 790 aa13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 PPARDQ03181 441 aa13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 TRAF2Q12933 501 aa13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 NFATC4Q14934 902 aa13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 SLC18A3Q16572 532 aa13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 CDKN3Q16667 212 aa13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 SPECC1LQ69YQ0 1117 aa13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 SLC35F3Q8IY50 421 aa13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 PQLC3Q8N755 202 aa13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 OR8K1Q8NGG5 319 aa13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 ZNF564Q8TBZ8 553 aaPredicted RBP13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 IFI44Q8TCB0 444 aa13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 BTN2A2Q8WVV5 523 aa13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 HNRNPLLQ8WVV9 542 aaKnown RBP13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 FAF2Q96CS3 445 aa13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 COQ10AQ96MF6 247 aa13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 CHP1Q99653 195 aa13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 B4GALT6Q9UBX8 382 aa13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 LHX6Q9UPM6 363 aa13.14□□□□□ -0.31
CTDSP1-206ENST00000464255 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.14□□□□□ -0.315e-7■■■□□ 16
CTDSP1-206ENST00000464255 KALRNO60229 2985 aa13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 TMEM202A6NGA9 273 aa13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 MFSD11O43934 449 aa13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 PCCBP05166 539 aa13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 HOXB3P14651 431 aaPredicted RBP13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 PTMSP20962 102 aa13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 HSPA9P38646 679 aaKnown RBP13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 SRP54P61011 504 aaKnown RBP13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 MAXP61244 160 aa13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 POLR2LP62875 67 aaKnown RBP13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 GALNT2Q10471 571 aa13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 SLC10A2Q12908 348 aaPredicted RBP13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 MTM1Q13496 603 aa13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 PAFAH1B3Q15102 231 aaKnown RBP13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 COL28A1Q2UY09 1125 aa13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 SKOR2Q2VWA4 1001 aaPredicted RBP13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 ANKRD20A8PQ5CZ79 823 aa13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 PERM1Q5SV97 790 aa13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 C6orf132Q5T0Z8 1188 aa13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 CFAP58Q5T655 872 aa13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 FAXCQ5TGI0 409 aa13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 NCBP2-AS2Q69YL0 99 aa13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 VSTM4Q8IW00 320 aa13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 LRRN4Q8WUT4 740 aa13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 PIH1D2Q8WWB5 315 aa13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 OR1E3Q8WZA6 343 aa13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 MAML1Q92585 1016 aa13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 NXPE2Q96DL1 559 aa13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 SMIM14Q96QK8 99 aa13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 LGR4Q9BXB1 951 aa13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 SLC13A1Q9BZW2 595 aa13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 SCUBE2Q9NQ36 999 aa13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 UVRAGQ9P2Y5 699 aa13.13□□□□□ -0.31
CTDSP1-206ENST00000464255 LRP4O75096 1905 aa13.12□□□□□ -0.31
CTDSP1-206ENST00000464255 A0A0U1RQS6 177 aa13.12□□□□□ -0.31
CTDSP1-206ENST00000464255 CPED1A4D0V7 1026 aa13.12□□□□□ -0.31
CTDSP1-206ENST00000464255 FZD6O60353 706 aa13.12□□□□□ -0.31
CTDSP1-206ENST00000464255 BRINP1O60477 761 aa13.12□□□□□ -0.31
CTDSP1-206ENST00000464255 SOCS5O75159 536 aa13.12□□□□□ -0.31
CTDSP1-206ENST00000464255 FUCA1P04066 466 aa13.12□□□□□ -0.31
CTDSP1-206ENST00000464255 PDHA1P08559 390 aa13.12□□□□□ -0.31
CTDSP1-206ENST00000464255 HOXC4P09017 264 aaPredicted RBP13.12□□□□□ -0.31
CTDSP1-206ENST00000464255 LHCGRP22888 699 aa13.12□□□□□ -0.31
CTDSP1-206ENST00000464255 GARSP41250 739 aaKnown RBP13.12□□□□□ -0.31
CTDSP1-206ENST00000464255 MMP13P45452 471 aa13.12□□□□□ -0.31
CTDSP1-206ENST00000464255 DUSP3P51452 185 aaPredicted RBP13.12□□□□□ -0.31
CTDSP1-206ENST00000464255 KRT81Q14533 505 aa13.12□□□□□ -0.31
CTDSP1-206ENST00000464255 ZNF235Q14590 738 aa13.12□□□□□ -0.31
CTDSP1-206ENST00000464255 CNGA3Q16281 694 aa13.12□□□□□ -0.31
CTDSP1-206ENST00000464255 HS1BP3Q53T59 392 aa13.12□□□□□ -0.31
CTDSP1-206ENST00000464255 MARC1Q5VT66 337 aa13.12□□□□□ -0.31
CTDSP1-206ENST00000464255 ALG1LQ6GMV1 187 aa13.12□□□□□ -0.31
CTDSP1-206ENST00000464255 PNCKQ6P2M8 343 aa13.12□□□□□ -0.31
CTDSP1-206ENST00000464255 ENPP7Q6UWV6 458 aa13.12□□□□□ -0.31
CTDSP1-206ENST00000464255 EFL1Q7Z2Z2 1120 aaKnown RBP13.12□□□□□ -0.31
CTDSP1-206ENST00000464255 LRRC49Q8IUZ0 686 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms