RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 FGF22Q9HCT0 170 aa17.4■□□□□ 0.38
HMGN1-210ENST00000464078 TNFRSF10CO14798 259 aa17.39■□□□□ 0.37
HMGN1-210ENST00000464078 FGF10O15520 208 aaPredicted RBP17.39■□□□□ 0.37
HMGN1-210ENST00000464078 TNFP01375 233 aa17.39■□□□□ 0.37
HMGN1-210ENST00000464078 HOXC4P09017 264 aaPredicted RBP17.39■□□□□ 0.37
HMGN1-210ENST00000464078 UNGP13051 313 aaPredicted RBP17.39■□□□□ 0.37
HMGN1-210ENST00000464078 ITIH1P19827 911 aa17.39■□□□□ 0.37
HMGN1-210ENST00000464078 KELP23276 732 aa17.39■□□□□ 0.37
HMGN1-210ENST00000464078 AIF1P55008 147 aa17.39■□□□□ 0.37
HMGN1-210ENST00000464078 HLTFQ14527 1009 aaKnown RBP eCLIP17.39■□□□□ 0.37
HMGN1-210ENST00000464078 CYTH1Q15438 398 aa17.39■□□□□ 0.37
HMGN1-210ENST00000464078 EFHC2Q5JST6 749 aa17.39■□□□□ 0.37
HMGN1-210ENST00000464078 PYROXD2Q8N2H3 581 aa17.39■□□□□ 0.37
HMGN1-210ENST00000464078 NETO2Q8NC67 525 aa17.39■□□□□ 0.37
HMGN1-210ENST00000464078 C3orf20Q8ND61 904 aa17.39■□□□□ 0.37
HMGN1-210ENST00000464078 OR56A4Q8NGH8 313 aa17.39■□□□□ 0.37
HMGN1-210ENST00000464078 SLC30A5Q8TAD4 765 aa17.39■□□□□ 0.37
HMGN1-210ENST00000464078 OR1E3Q8WZA6 343 aa17.39■□□□□ 0.37
HMGN1-210ENST00000464078 CATSPERBQ9H7T0 1116 aa17.39■□□□□ 0.37
HMGN1-210ENST00000464078 FOXJ2Q9P0K8 574 aa17.39■□□□□ 0.37
HMGN1-210ENST00000464078 UBA2Q9UBT2 640 aaPredicted RBP17.39■□□□□ 0.37
HMGN1-210ENST00000464078 RNF215Q9Y6U7 377 aa17.39■□□□□ 0.37
HMGN1-210ENST00000464078 CACNB4O00305 520 aaPredicted RBP17.38■□□□□ 0.37
HMGN1-210ENST00000464078 SUV39H1O43463 412 aa17.38■□□□□ 0.37
HMGN1-210ENST00000464078 GFPT2O94808 682 aa17.38■□□□□ 0.37
HMGN1-210ENST00000464078 PCCBP05166 539 aa17.38■□□□□ 0.37
HMGN1-210ENST00000464078 FAM87AP0C7U9 286 aa17.38■□□□□ 0.37
HMGN1-210ENST00000464078 GPD1P21695 349 aa17.38■□□□□ 0.37
HMGN1-210ENST00000464078 EEF1GP26641 437 aaKnown RBP17.38■□□□□ 0.37
HMGN1-210ENST00000464078 ETV5P41161 510 aa17.38■□□□□ 0.37
HMGN1-210ENST00000464078 CSNK1DP48730 415 aa17.38■□□□□ 0.37
HMGN1-210ENST00000464078 JAM2P57087 298 aa17.38■□□□□ 0.37
HMGN1-210ENST00000464078 UBE2HP62256 183 aa17.38■□□□□ 0.37
HMGN1-210ENST00000464078 CLPPQ16740 277 aaPredicted RBP17.38■□□□□ 0.37
HMGN1-210ENST00000464078 DPCR1Q3MIW9 517 aa17.38■□□□□ 0.37
HMGN1-210ENST00000464078 HSP90AA4PQ58FG1 418 aa17.38■□□□□ 0.37
HMGN1-210ENST00000464078 CFAP58Q5T655 872 aa17.38■□□□□ 0.37
HMGN1-210ENST00000464078 ZSWIM9Q86XI8 627 aa17.38■□□□□ 0.37
HMGN1-210ENST00000464078 ZSCAN1Q8NBB4 408 aa17.38■□□□□ 0.37
HMGN1-210ENST00000464078 PLA2G15Q8NCC3 412 aa17.38■□□□□ 0.37
HMGN1-210ENST00000464078 FAM46DQ8NEK8 389 aa17.38■□□□□ 0.37
HMGN1-210ENST00000464078 FUBP1Q96AE4 644 aaKnown RBP17.38■□□□□ 0.37
HMGN1-210ENST00000464078 ECHDC3Q96DC8 303 aa17.38■□□□□ 0.37
HMGN1-210ENST00000464078 TRIM4Q9C037 500 aa17.38■□□□□ 0.37
HMGN1-210ENST00000464078 DOPEY2Q9Y3R5 2298 aa17.38■□□□□ 0.37
HMGN1-210ENST00000464078 SDK2Q58EX2 2172 aa17.38■□□□□ 0.37
HMGN1-210ENST00000464078 NBASA2RRP1 2371 aa17.37■□□□□ 0.37
HMGN1-210ENST00000464078 TMEM202A6NGA9 273 aa17.37■□□□□ 0.37
HMGN1-210ENST00000464078 C9orf172C9J069 976 aa17.37■□□□□ 0.37
HMGN1-210ENST00000464078 PES1O00541 588 aaKnown RBP17.37■□□□□ 0.37
HMGN1-210ENST00000464078 BUB1BO60566 1050 aaPredicted RBP17.37■□□□□ 0.37
HMGN1-210ENST00000464078 PRAMEF11O60813 436 aa17.37■□□□□ 0.37
HMGN1-210ENST00000464078 HTR7P34969 479 aa17.37■□□□□ 0.37
HMGN1-210ENST00000464078 SOX5P35711 763 aa17.37■□□□□ 0.37
HMGN1-210ENST00000464078 TRIM23P36406 574 aa17.37■□□□□ 0.37
HMGN1-210ENST00000464078 NSFP46459 744 aaKnown RBP17.37■□□□□ 0.37
HMGN1-210ENST00000464078 RALGDSQ12967 914 aa17.37■□□□□ 0.37
HMGN1-210ENST00000464078 TBR1Q16650 682 aa17.37■□□□□ 0.37
HMGN1-210ENST00000464078 TCP11X2Q5H9J9 407 aa17.37■□□□□ 0.37
HMGN1-210ENST00000464078 SPECC1LQ69YQ0 1117 aa17.37■□□□□ 0.37
HMGN1-210ENST00000464078 WDR59Q6PJI9 974 aa17.37■□□□□ 0.37
HMGN1-210ENST00000464078 TMPRSS9Q7Z410 1059 aa17.37■□□□□ 0.37
HMGN1-210ENST00000464078 ZNF438Q7Z4V0 828 aa17.37■□□□□ 0.37
HMGN1-210ENST00000464078 TAF8Q7Z7C8 310 aa17.37■□□□□ 0.37
HMGN1-210ENST00000464078 PHLDB2Q86SQ0 1253 aa17.37■□□□□ 0.37
HMGN1-210ENST00000464078 VASH2Q86V25 355 aa17.37■□□□□ 0.37
HMGN1-210ENST00000464078 ZFAND4Q86XD8 727 aa17.37■□□□□ 0.37
HMGN1-210ENST00000464078 PHF13Q86YI8 300 aaPredicted RBP17.37■□□□□ 0.37
HMGN1-210ENST00000464078 CAMK1DQ8IU85 385 aa17.37■□□□□ 0.37
HMGN1-210ENST00000464078 Q8N9G6 341 aaPredicted RBP17.37■□□□□ 0.37
HMGN1-210ENST00000464078 LRRC19Q9H756 370 aa17.37■□□□□ 0.37
HMGN1-210ENST00000464078 ATP13A3Q9H7F0 1226 aa17.37■□□□□ 0.37
HMGN1-210ENST00000464078 WDR70Q9NW82 654 aa17.37■□□□□ 0.37
HMGN1-210ENST00000464078 DONSONQ9NYP3 566 aa17.37■□□□□ 0.37
HMGN1-210ENST00000464078 ADAM22Q9P0K1 906 aa17.37■□□□□ 0.37
HMGN1-210ENST00000464078 LRIT1Q9P2V4 623 aa17.37■□□□□ 0.37
HMGN1-210ENST00000464078 PCDHB11Q9Y5F2 797 aa17.37■□□□□ 0.37
HMGN1-210ENST00000464078 SIGLEC16A6NMB1 481 aa17.36■□□□□ 0.37
HMGN1-210ENST00000464078 B4DGG1 531 aa17.36■□□□□ 0.37
HMGN1-210ENST00000464078 CCP110O43303 1012 aa17.36■□□□□ 0.37
HMGN1-210ENST00000464078 RECQL5O94762 991 aaPredicted RBP17.36■□□□□ 0.37
HMGN1-210ENST00000464078 CPNE6O95741 557 aa17.36■□□□□ 0.37
HMGN1-210ENST00000464078 CALB1P05937 261 aa17.36■□□□□ 0.37
HMGN1-210ENST00000464078 SERPINA4P29622 427 aa17.36■□□□□ 0.37
HMGN1-210ENST00000464078 ZNF143P52747 638 aaPredicted RBP17.36■□□□□ 0.37
HMGN1-210ENST00000464078 NDST2P52849 883 aa17.36■□□□□ 0.37
HMGN1-210ENST00000464078 ARHGEF7Q14155 803 aa17.36■□□□□ 0.37
HMGN1-210ENST00000464078 NR1D2Q14995 579 aa17.36■□□□□ 0.37
HMGN1-210ENST00000464078 C16orf72Q14CZ0 275 aa17.36■□□□□ 0.37
HMGN1-210ENST00000464078 TSR1Q2NL82 804 aaKnown RBP17.36■□□□□ 0.37
HMGN1-210ENST00000464078 C17orf82Q86X59 251 aaPredicted RBP17.36■□□□□ 0.37
HMGN1-210ENST00000464078 SFTPA2Q8IWL1 248 aa17.36■□□□□ 0.37
HMGN1-210ENST00000464078 KIAA1524Q8TCG1 905 aa17.36■□□□□ 0.37
HMGN1-210ENST00000464078 SPOCK2Q92563 424 aa17.36■□□□□ 0.37
HMGN1-210ENST00000464078 USP7Q93009 1102 aa17.36■□□□□ 0.37
HMGN1-210ENST00000464078 FUCA2Q9BTY2 467 aa17.36■□□□□ 0.37
HMGN1-210ENST00000464078 TMEM168Q9H0V1 697 aa17.36■□□□□ 0.37
HMGN1-210ENST00000464078 DACH1Q9UI36 760 aa17.36■□□□□ 0.37
HMGN1-210ENST00000464078 FZD10Q9ULW2 581 aa17.36■□□□□ 0.37
HMGN1-210ENST00000464078 TCRBV5S1A1TA0A578 114 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms