RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 UNC5BQ8IZJ1 945 aa15.35■□□□□ 0.05
APP-211ENST00000462267 ZNF397Q8NF99 534 aaPredicted RBP15.35■□□□□ 0.05
APP-211ENST00000462267 RTP4Q96DX8 246 aa15.35■□□□□ 0.05
APP-211ENST00000462267 GDAP1L1Q96MZ0 367 aa15.35■□□□□ 0.05
APP-211ENST00000462267 STAP1Q9ULZ2 295 aa15.35■□□□□ 0.05
APP-211ENST00000462267 CHD5Q8TDI0 1954 aa15.35■□□□□ 0.05
APP-211ENST00000462267 TMEM202A6NGA9 273 aa15.34■□□□□ 0.05
APP-211ENST00000462267 PCCBP05166 539 aa15.34■□□□□ 0.05
APP-211ENST00000462267 HOXC4P09017 264 aaPredicted RBP15.34■□□□□ 0.05
APP-211ENST00000462267 ACVRL1P37023 503 aa15.34■□□□□ 0.05
APP-211ENST00000462267 SLC6A3Q01959 620 aa15.34■□□□□ 0.05
APP-211ENST00000462267 TSR1Q2NL82 804 aaKnown RBP15.34■□□□□ 0.05
APP-211ENST00000462267 ATXN7L2Q5T6C5 722 aaPredicted RBP15.34■□□□□ 0.05
APP-211ENST00000462267 ERICH6BQ5W0A0 696 aa15.34■□□□□ 0.05
APP-211ENST00000462267 ANKRD40Q6AI12 368 aa15.34■□□□□ 0.05
APP-211ENST00000462267 KDELC2Q7Z4H8 507 aa15.34■□□□□ 0.05
APP-211ENST00000462267 WDTC1Q8N5D0 677 aa15.34■□□□□ 0.05
APP-211ENST00000462267 BMPERQ8N8U9 685 aa15.34■□□□□ 0.05
APP-211ENST00000462267 EHBP1Q8NDI1 1231 aa15.34■□□□□ 0.05
APP-211ENST00000462267 CCL4L1Q8NHW4 92 aa15.34■□□□□ 0.05
APP-211ENST00000462267 ZDHHC1Q8WTX9 485 aa15.34■□□□□ 0.05
APP-211ENST00000462267 NT5C3BQ969T7 300 aa15.34■□□□□ 0.05
APP-211ENST00000462267 HMCESQ96FZ2 354 aa15.34■□□□□ 0.05
APP-211ENST00000462267 ZPBPQ9BS86 351 aa15.34■□□□□ 0.05
APP-211ENST00000462267 MRPL40Q9NQ50 206 aaKnown RBP15.34■□□□□ 0.05
APP-211ENST00000462267 SPATS2LQ9NUQ6 558 aaKnown RBP15.34■□□□□ 0.05
APP-211ENST00000462267 PPARGC1AQ9UBK2 798 aaKnown RBP15.34■□□□□ 0.05
APP-211ENST00000462267 HPCAL4Q9UM19 191 aa15.34■□□□□ 0.05
APP-211ENST00000462267 MFHAS1Q9Y4C4 1052 aa15.34■□□□□ 0.05
APP-211ENST00000462267 ARHGEF17Q96PE2 2063 aaPredicted RBP15.34■□□□□ 0.05
APP-211ENST00000462267 TFE3P19532 575 aaPredicted RBP15.33■□□□□ 0.04
APP-211ENST00000462267 STAT1P42224 750 aa15.33■□□□□ 0.04
APP-211ENST00000462267 PRCPP42785 496 aa15.33■□□□□ 0.04
APP-211ENST00000462267 SULT1E1P49888 294 aa15.33■□□□□ 0.04
APP-211ENST00000462267 LRRC63Q05C16 580 aa15.33■□□□□ 0.04
APP-211ENST00000462267 DEUP1Q05D60 604 aa15.33■□□□□ 0.04
APP-211ENST00000462267 BIRC2Q13490 618 aa15.33■□□□□ 0.04
APP-211ENST00000462267 ATP1A1-AS1Q5TC04 95 aa15.33■□□□□ 0.04
APP-211ENST00000462267 CEACAM20Q6UY09 585 aa15.33■□□□□ 0.04
APP-211ENST00000462267 TIPARPQ7Z3E1 657 aaKnown RBP15.33■□□□□ 0.04
APP-211ENST00000462267 HCAR2Q8TDS4 363 aa15.33■□□□□ 0.04
APP-211ENST00000462267 FUBP1Q96AE4 644 aaKnown RBP15.33■□□□□ 0.04
APP-211ENST00000462267 GTPBP4Q9BZE4 634 aaKnown RBP15.33■□□□□ 0.04
APP-211ENST00000462267 TTYH3Q9C0H2 523 aa15.33■□□□□ 0.04
APP-211ENST00000462267 CYP4F12Q9HCS2 524 aa15.33■□□□□ 0.04
APP-211ENST00000462267 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.33■□□□□ 0.044e-7■□□□□ 9.7
APP-211ENST00000462267 TMEM184BQ9Y519 407 aaPredicted RBP15.33■□□□□ 0.04
APP-211ENST00000462267 PCDHB3Q9Y5E6 796 aa15.33■□□□□ 0.04
APP-211ENST00000462267 DOCK4Q8N1I0 1966 aa15.33■□□□□ 0.04
APP-211ENST00000462267 IGHV1OR21-1A0A087WYE8 117 aa15.32■□□□□ 0.04
APP-211ENST00000462267 FAM237AA0A1B0GTK4 181 aa15.32■□□□□ 0.04
APP-211ENST00000462267 RFPL1O75677 317 aa15.32■□□□□ 0.04
APP-211ENST00000462267 ECEL1O95672 775 aa15.32■□□□□ 0.04
APP-211ENST00000462267 F13A1P00488 732 aa15.32■□□□□ 0.04
APP-211ENST00000462267 FGF1P05230 155 aa15.32■□□□□ 0.04
APP-211ENST00000462267 ZSCAN22P10073 491 aaPredicted RBP15.32■□□□□ 0.04
APP-211ENST00000462267 CCNB1P14635 433 aa15.32■□□□□ 0.04
APP-211ENST00000462267 MPSTP25325 297 aa15.32■□□□□ 0.04
APP-211ENST00000462267 NDUFA8P51970 172 aa15.32■□□□□ 0.04
APP-211ENST00000462267 MC2RQ01718 297 aa15.32■□□□□ 0.04
APP-211ENST00000462267 COBLL1Q53SF7 1204 aa15.32■□□□□ 0.04
APP-211ENST00000462267 NKAIN2Q5VXU1 208 aa15.32■□□□□ 0.04
APP-211ENST00000462267 TMEM71Q6P5X7 295 aa15.32■□□□□ 0.04
APP-211ENST00000462267 KRBA2Q6ZNG9 492 aa15.32■□□□□ 0.04
APP-211ENST00000462267 PLA2G15Q8NCC3 412 aa15.32■□□□□ 0.04
APP-211ENST00000462267 RETREG1Q9H6L5 497 aa15.32■□□□□ 0.04
APP-211ENST00000462267 ACP6Q9NPH0 428 aa15.32■□□□□ 0.04
APP-211ENST00000462267 CASS4Q9NQ75 786 aa15.32■□□□□ 0.04
APP-211ENST00000462267 PDP2Q9P2J9 529 aa15.32■□□□□ 0.04
APP-211ENST00000462267 MAP4K5Q9Y4K4 846 aa15.32■□□□□ 0.04
APP-211ENST00000462267 HIVEP3Q5T1R4 2406 aa15.32■□□□□ 0.04
APP-211ENST00000462267 CFAP69A5D8W1 941 aa15.31■□□□□ 0.04
APP-211ENST00000462267 WIPF3A6NGB9 483 aa15.31■□□□□ 0.04
APP-211ENST00000462267 ZSCAN5CA6NGD5 496 aaPredicted RBP15.31■□□□□ 0.04
APP-211ENST00000462267 STK17BO94768 372 aa15.31■□□□□ 0.04
APP-211ENST00000462267 CLDN1O95832 211 aa15.31■□□□□ 0.04
APP-211ENST00000462267 IGSF6O95976 241 aa15.31■□□□□ 0.04
APP-211ENST00000462267 ERBB2P04626 1255 aa15.31■□□□□ 0.04
APP-211ENST00000462267 CSF2RBP32927 897 aa15.31■□□□□ 0.04
APP-211ENST00000462267 NOP2P46087 812 aaKnown RBP15.31■□□□□ 0.04
APP-211ENST00000462267 MAPKAPK2P49137 400 aa15.31■□□□□ 0.04
APP-211ENST00000462267 LIG3P49916 1009 aa15.31■□□□□ 0.04
APP-211ENST00000462267 PMS1P54277 932 aaKnown RBP15.31■□□□□ 0.04
APP-211ENST00000462267 RAPGEF1Q13905 1077 aa15.31■□□□□ 0.04
APP-211ENST00000462267 UGP2Q16851 508 aa15.31■□□□□ 0.04
APP-211ENST00000462267 SLC25A52Q3SY17 297 aa15.31■□□□□ 0.04
APP-211ENST00000462267 ERAP2Q6P179 960 aa15.31■□□□□ 0.04
APP-211ENST00000462267 ZDHHC17Q8IUH5 632 aa15.31■□□□□ 0.04
APP-211ENST00000462267 SRRM1Q8IYB3 904 aaKnown RBP15.31■□□□□ 0.04
APP-211ENST00000462267 ESX1Q8N693 406 aa15.31■□□□□ 0.04
APP-211ENST00000462267 C1orf131Q8NDD1 294 aaKnown RBP15.31■□□□□ 0.04
APP-211ENST00000462267 TBCBQ99426 244 aa15.31■□□□□ 0.04
APP-211ENST00000462267 GSDMCQ9BYG8 508 aa15.31■□□□□ 0.04
APP-211ENST00000462267 MAGEH1Q9H213 219 aa15.31■□□□□ 0.04
APP-211ENST00000462267 SYNCQ9H7C4 482 aa15.31■□□□□ 0.04
APP-211ENST00000462267 UBE2TQ9NPD8 197 aaPredicted RBP15.31■□□□□ 0.04
APP-211ENST00000462267 PCDH12Q9NPG4 1184 aa15.31■□□□□ 0.04
APP-211ENST00000462267 FBXO8Q9NRD0 319 aa15.31■□□□□ 0.04
APP-211ENST00000462267 MOSPD1Q9UJG1 213 aa15.31■□□□□ 0.04
APP-211ENST00000462267 TLK1Q9UKI8 766 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms