RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 A0A1W2PQ67 120 aa10.22□□□□□ -0.77
SF3A3-204ENST00000462258 CFAP69A5D8W1 941 aa10.22□□□□□ -0.77
SF3A3-204ENST00000462258 SRRM3A6NNA2 597 aaPredicted RBP10.22□□□□□ -0.77
SF3A3-204ENST00000462258 AKR1B15C9JRZ8 316 aaPredicted RBP10.22□□□□□ -0.77
SF3A3-204ENST00000462258 K7ESM1 405 aa10.22□□□□□ -0.77
SF3A3-204ENST00000462258 HTRA2O43464 458 aaPredicted RBP10.22□□□□□ -0.77
SF3A3-204ENST00000462258 CKMT1AP12532 417 aa10.22□□□□□ -0.77
SF3A3-204ENST00000462258 TRAF2Q12933 501 aa10.22□□□□□ -0.77
SF3A3-204ENST00000462258 MTM1Q13496 603 aa10.22□□□□□ -0.77
SF3A3-204ENST00000462258 CAMK2BQ13554 666 aa10.22□□□□□ -0.77
SF3A3-204ENST00000462258 NFATC4Q14934 902 aa10.22□□□□□ -0.77
SF3A3-204ENST00000462258 DEFB133Q30KQ1 61 aa10.22□□□□□ -0.77
SF3A3-204ENST00000462258 PRRT3Q5FWE3 981 aa10.22□□□□□ -0.77
SF3A3-204ENST00000462258 TIGD7Q6NT04 549 aaPredicted RBP10.22□□□□□ -0.77
SF3A3-204ENST00000462258 ZCCHC8Q6NZY4 707 aaKnown RBP10.22□□□□□ -0.77
SF3A3-204ENST00000462258 LRRC49Q8IUZ0 686 aa10.22□□□□□ -0.77
SF3A3-204ENST00000462258 FAM181AQ8N9Y4 354 aa10.22□□□□□ -0.77
SF3A3-204ENST00000462258 SLC35G2Q8TBE7 412 aa10.22□□□□□ -0.77
SF3A3-204ENST00000462258 SPOCK2Q92563 424 aa10.22□□□□□ -0.77
SF3A3-204ENST00000462258 NXPE2Q96DL1 559 aa10.22□□□□□ -0.77
SF3A3-204ENST00000462258 TBATAQ96M53 351 aa10.22□□□□□ -0.77
SF3A3-204ENST00000462258 SLC13A1Q9BZW2 595 aa10.22□□□□□ -0.77
SF3A3-204ENST00000462258 POLR1EQ9GZS1 481 aaKnown RBP10.22□□□□□ -0.77
SF3A3-204ENST00000462258 TCEAL2Q9H3H9 227 aaPredicted RBP10.22□□□□□ -0.77
SF3A3-204ENST00000462258 NOD2Q9HC29 1040 aa10.22□□□□□ -0.77
SF3A3-204ENST00000462258 NT5MQ9NPB1 228 aa10.22□□□□□ -0.77
SF3A3-204ENST00000462258 EVA1BQ9NVM1 165 aa10.22□□□□□ -0.77
SF3A3-204ENST00000462258 SPASTQ9UBP0 616 aa10.22□□□□□ -0.77
SF3A3-204ENST00000462258 B4GALT6Q9UBX8 382 aa10.22□□□□□ -0.77
SF3A3-204ENST00000462258 PNMA8BQ9ULN7 279 aaPredicted RBP10.22□□□□□ -0.77
SF3A3-204ENST00000462258 TTLL3Q9Y4R7 772 aa10.22□□□□□ -0.77
SF3A3-204ENST00000462258 OR1A2Q9Y585 309 aa10.22□□□□□ -0.77
SF3A3-204ENST00000462258 PCDHGC4Q9Y5F7 938 aa10.22□□□□□ -0.77
SF3A3-204ENST00000462258 CSNK1G3Q9Y6M4 447 aa10.22□□□□□ -0.77
SF3A3-204ENST00000462258 APC2O95996 2303 aa10.22□□□□□ -0.77
SF3A3-204ENST00000462258 LY6G6EA0A0G2JKS1 128 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 LRRD1A4D1F6 860 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 RECQL5O94762 991 aaPredicted RBP10.21□□□□□ -0.77
SF3A3-204ENST00000462258 MTA2O94776 668 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 PGLSO95336 258 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 KRT1P04264 644 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 CAPNS1P04632 268 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 MYF5P13349 255 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 JUPP14923 745 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 GM2AP17900 193 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 NFKBIAP25963 317 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 HTR1BP28222 390 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 VIPR1P32241 457 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 ARHGAP25P42331 645 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 PEX5P50542 639 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 BLKP51451 505 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 DUSP3P51452 185 aaPredicted RBP10.21□□□□□ -0.77
SF3A3-204ENST00000462258 KIAA1024LP59773 190 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 INSM1Q01101 510 aaPredicted RBP10.21□□□□□ -0.77
SF3A3-204ENST00000462258 PPARDQ03181 441 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 GBE1Q04446 702 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 TBX2Q13207 712 aaPredicted RBP10.21□□□□□ -0.77
SF3A3-204ENST00000462258 INPP5AQ14642 412 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 ACOX1Q15067 660 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 CNGA3Q16281 694 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 IFI16Q16666 785 aaKnown RBP10.21□□□□□ -0.77
SF3A3-204ENST00000462258 LIPIQ6XZB0 460 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 TEX26Q8N6G2 289 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 PQLC3Q8N755 202 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 PDCD7Q8N8D1 485 aaKnown RBP10.21□□□□□ -0.77
SF3A3-204ENST00000462258 PLA2G15Q8NCC3 412 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 ATL2Q8NHH9 583 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 MAML1Q92585 1016 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 NUS1Q96E22 293 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 PDXPQ96GD0 296 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 WDR92Q96MX6 357 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 ZNF830Q96NB3 372 aaPredicted RBP10.21□□□□□ -0.77
SF3A3-204ENST00000462258 IL12RB2Q99665 862 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 SEMA3CQ99985 751 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 ANP32EQ9BTT0 268 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 APOOQ9BUR5 198 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 TRIM5Q9C035 493 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 USP29Q9HBJ7 922 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 HAUS2Q9NVX0 235 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 NCKIPSDQ9NZQ3 722 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 KLQ9UEF7 1012 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 CLCA2Q9UQC9 943 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 U3KQA8 63 aa10.21□□□□□ -0.77
SF3A3-204ENST00000462258 ACACAQ13085 2346 aa10.21□□□□□ -0.78
SF3A3-204ENST00000462258 TRABD2BA6NFA1 517 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 NPIPB15A6NHN6 443 aaPredicted RBP10.2□□□□□ -0.78
SF3A3-204ENST00000462258 A8MX80 341 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 ZNF487B1APH4 448 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 CACNB4O00305 520 aaPredicted RBP10.2□□□□□ -0.78
SF3A3-204ENST00000462258 MATN3O15232 486 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 GCATO75600 419 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 HEXIM1O94992 359 aaKnown RBP10.2□□□□□ -0.78
SF3A3-204ENST00000462258 RASGRP1O95267 797 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 HLA-DQB2P05538 268 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 GP1BAP07359 652 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 CELA2BP08218 269 aaPredicted RBP10.2□□□□□ -0.78
SF3A3-204ENST00000462258 CYP2A6P11509 494 aaPredicted RBP10.2□□□□□ -0.78
SF3A3-204ENST00000462258 TSHRP16473 764 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 MX2P20592 715 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 LHCGRP22888 699 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms