RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 CCM2LQ9NUG4 571 aaPredicted RBP18.54■□□□□ 0.56
HPS3-204ENST00000462030 MRGBPQ9NV56 204 aa18.54■□□□□ 0.56
HPS3-204ENST00000462030 MTF2Q9Y483 593 aaPredicted RBP18.54■□□□□ 0.56
HPS3-204ENST00000462030 ASB14A6NK59 587 aa18.53■□□□□ 0.56
HPS3-204ENST00000462030 C9JVG2 144 aa18.53■□□□□ 0.56
HPS3-204ENST00000462030 GPR32O75388 356 aa18.53■□□□□ 0.56
HPS3-204ENST00000462030 PMPCBO75439 489 aa18.53■□□□□ 0.56
HPS3-204ENST00000462030 ATE1O95260 518 aa18.53■□□□□ 0.56
HPS3-204ENST00000462030 MYF6P23409 242 aa18.53■□□□□ 0.56
HPS3-204ENST00000462030 RWDD4Q6NW29 188 aaKnown RBP18.53■□□□□ 0.56
HPS3-204ENST00000462030 MFSD2AQ8NA29 543 aa18.53■□□□□ 0.56
HPS3-204ENST00000462030 ZMIZ2Q8NF64 920 aa18.53■□□□□ 0.56
HPS3-204ENST00000462030 ANKRD49Q8WVL7 239 aa18.53■□□□□ 0.56
HPS3-204ENST00000462030 TSGA13Q96PP4 275 aa18.53■□□□□ 0.56
HPS3-204ENST00000462030 TUBA8Q9NY65 449 aaPredicted RBP18.53■□□□□ 0.56
HPS3-204ENST00000462030 GIMAP2Q9UG22 337 aa18.53■□□□□ 0.56
HPS3-204ENST00000462030 NR5A2O00482 541 aa18.52■□□□□ 0.56
HPS3-204ENST00000462030 TFPTP0C1Z6 253 aa18.52■□□□□ 0.56
HPS3-204ENST00000462030 IRAK1BP1Q5VVH5 260 aa18.52■□□□□ 0.56
HPS3-204ENST00000462030 IL31Q6EBC2 164 aa18.52■□□□□ 0.56
HPS3-204ENST00000462030 ERO1BQ86YB8 467 aa18.52■□□□□ 0.56
HPS3-204ENST00000462030 TOP6BLQ8N6T0 577 aa18.52■□□□□ 0.56
HPS3-204ENST00000462030 PPP1R14BQ96C90 147 aa18.52■□□□□ 0.56
HPS3-204ENST00000462030 PGAP3Q96FM1 320 aaPredicted RBP18.52■□□□□ 0.56
HPS3-204ENST00000462030 FBXL20Q96IG2 436 aa18.52■□□□□ 0.56
HPS3-204ENST00000462030 FCRL5Q96RD9 977 aa18.52■□□□□ 0.56
HPS3-204ENST00000462030 NPLQ9BXD5 320 aaPredicted RBP18.52■□□□□ 0.56
HPS3-204ENST00000462030 GLOD4Q9HC38 313 aa18.52■□□□□ 0.56
HPS3-204ENST00000462030 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.52■□□□□ 0.56
HPS3-204ENST00000462030 MAP10Q9P2G4 905 aa18.52■□□□□ 0.56
HPS3-204ENST00000462030 PIN4Q9Y237 131 aaKnown RBP18.52■□□□□ 0.56
HPS3-204ENST00000462030 DHRS12A0PJE2 317 aa18.52■□□□□ 0.56
HPS3-204ENST00000462030 ATP6V1G1O75348 118 aa18.52■□□□□ 0.56
HPS3-204ENST00000462030 LTA4HP09960 611 aaKnown RBP18.52■□□□□ 0.56
HPS3-204ENST00000462030 GPX3P22352 226 aa18.52■□□□□ 0.56
HPS3-204ENST00000462030 OXTRP30559 389 aa18.52■□□□□ 0.56
HPS3-204ENST00000462030 SLC5A3P53794 718 aa18.52■□□□□ 0.56
HPS3-204ENST00000462030 MERTKQ12866 999 aa18.52■□□□□ 0.56
HPS3-204ENST00000462030 INTS11Q5TA45 600 aaKnown RBP18.52■□□□□ 0.56
HPS3-204ENST00000462030 AGAP9Q5VTM2 703 aa18.52■□□□□ 0.56
HPS3-204ENST00000462030 NEPROQ6NW34 567 aa18.52■□□□□ 0.56
HPS3-204ENST00000462030 LYSMD3Q7Z3D4 306 aa18.52■□□□□ 0.56
HPS3-204ENST00000462030 PATL1Q86TB9 770 aaKnown RBP18.52■□□□□ 0.56
HPS3-204ENST00000462030 LRRC43Q8N309 656 aa18.52■□□□□ 0.56
HPS3-204ENST00000462030 RHOBTB2Q9BYZ6 727 aa18.52■□□□□ 0.56
HPS3-204ENST00000462030 PTGDR2Q9Y5Y4 395 aa18.52■□□□□ 0.56
HPS3-204ENST00000462030 BOLA2-SMG1P6H3BVE0 249 aa18.51■□□□□ 0.55
HPS3-204ENST00000462030 ADRA1AP35348 466 aa18.51■□□□□ 0.55
HPS3-204ENST00000462030 CXCR3P49682 368 aa18.51■□□□□ 0.55
HPS3-204ENST00000462030 KIF19Q2TAC6 998 aa18.51■□□□□ 0.55
HPS3-204ENST00000462030 KIAA0930Q6ICG6 404 aaPredicted RBP18.51■□□□□ 0.55
HPS3-204ENST00000462030 CAMK1DQ8IU85 385 aa18.51■□□□□ 0.55
HPS3-204ENST00000462030 ARRDC4Q8NCT1 418 aa18.51■□□□□ 0.55
HPS3-204ENST00000462030 CCDC126Q96EE4 140 aa18.51■□□□□ 0.55
HPS3-204ENST00000462030 GPATCH1Q9BRR8 931 aaKnown RBP18.51■□□□□ 0.55
HPS3-204ENST00000462030 TRIM8Q9BZR9 551 aa18.51■□□□□ 0.55
HPS3-204ENST00000462030 AGPAT4Q9NRZ5 378 aa18.51■□□□□ 0.55
HPS3-204ENST00000462030 A0A0J9YYE9 177 aa18.51■□□□□ 0.55
HPS3-204ENST00000462030 ANXA9O76027 345 aa18.51■□□□□ 0.55
HPS3-204ENST00000462030 SUPT7LO94864 414 aa18.51■□□□□ 0.55
HPS3-204ENST00000462030 TPP2P29144 1249 aaPredicted RBP18.51■□□□□ 0.55
HPS3-204ENST00000462030 KCNC1P48547 511 aa18.51■□□□□ 0.55
HPS3-204ENST00000462030 STX1BP61266 288 aa18.51■□□□□ 0.55
HPS3-204ENST00000462030 PMS2P3Q13401 168 aa18.51■□□□□ 0.55
HPS3-204ENST00000462030 CAPRIN1Q14444 709 aaKnown RBP18.51■□□□□ 0.55
HPS3-204ENST00000462030 PM20D1Q6GTS8 502 aa18.51■□□□□ 0.55
HPS3-204ENST00000462030 BHLHA9Q7RTU4 235 aa18.51■□□□□ 0.55
HPS3-204ENST00000462030 FAM35AQ86V20 835 aa18.51■□□□□ 0.55
HPS3-204ENST00000462030 ARHGAP12Q8IWW6 846 aa18.51■□□□□ 0.55
HPS3-204ENST00000462030 ATPAF2Q8N5M1 289 aa18.51■□□□□ 0.55
HPS3-204ENST00000462030 PACRGLQ8N7B6 248 aa18.51■□□□□ 0.55
HPS3-204ENST00000462030 TNIP2Q8NFZ5 429 aa18.51■□□□□ 0.55
HPS3-204ENST00000462030 ADAMTS16Q8TE57 1224 aa18.51■□□□□ 0.55
HPS3-204ENST00000462030 ROPN1LQ96C74 230 aa18.51■□□□□ 0.55
HPS3-204ENST00000462030 C19orf60Q96EN9 201 aa18.51■□□□□ 0.55
HPS3-204ENST00000462030 HIPK3Q9H422 1215 aa18.51■□□□□ 0.55
HPS3-204ENST00000462030 PAMP19021 973 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 CHRM3P20309 590 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 ACADVLP49748 655 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 SLC36A3Q495N2 470 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 VPS26BQ4G0F5 336 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 DEFB132Q7Z7B7 95 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 TAC4Q86UU9 113 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 CMTR2Q8IYT2 770 aaKnown RBP18.5■□□□□ 0.55
HPS3-204ENST00000462030 OFCC1Q8IZS5 231 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 TMEM40Q8WWA1 233 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 CYGBQ8WWM9 190 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 ZUFSPQ96AP4 578 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 SLC45A3Q96JT2 553 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 FSD1LQ9BXM9 530 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 SIK2Q9H0K1 926 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 ALG9Q9H6U8 611 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 RPF2Q9H7B2 306 aaKnown RBP18.5■□□□□ 0.55
HPS3-204ENST00000462030 AKTIPQ9H8T0 292 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 CXorf21Q9HAI6 301 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 CNGB3Q9NQW8 809 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 GPRC5DQ9NZD1 345 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 PTBP2Q9UKA9 531 aaKnown RBP18.5■□□□□ 0.55
HPS3-204ENST00000462030 OAZ3Q9UMX2 235 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 NEU3Q9UQ49 428 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms