RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 KDM4EB2RXH2 506 aaPredicted RBP4.39□□□□□ -1.71
UBA3-204ENST00000461522 FAM157AC9JC47 383 aa4.39□□□□□ -1.71
UBA3-204ENST00000461522 CLGNO14967 610 aa4.39□□□□□ -1.71
UBA3-204ENST00000461522 CBX6O95503 412 aa4.39□□□□□ -1.71
UBA3-204ENST00000461522 DAOP14920 347 aa4.39□□□□□ -1.71
UBA3-204ENST00000461522 RBM5P52756 815 aaKnown RBP eCLIP4.39□□□□□ -1.71
UBA3-204ENST00000461522 DLX5P56178 289 aa4.39□□□□□ -1.71
UBA3-204ENST00000461522 ARHGAP8P85298 464 aa4.39□□□□□ -1.71
UBA3-204ENST00000461522 BIRC2Q13490 618 aa4.39□□□□□ -1.71
UBA3-204ENST00000461522 IL13RA2Q14627 380 aa4.39□□□□□ -1.71
UBA3-204ENST00000461522 SLC39A14Q15043 492 aa4.39□□□□□ -1.71
UBA3-204ENST00000461522 AP5B1Q2VPB7 878 aa4.39□□□□□ -1.71
UBA3-204ENST00000461522 ZNF484Q5JVG2 852 aa4.39□□□□□ -1.71
UBA3-204ENST00000461522 C1orf228Q6PIY5 440 aa4.39□□□□□ -1.71
UBA3-204ENST00000461522 CASC1Q6TDU7 716 aa4.39□□□□□ -1.71
UBA3-204ENST00000461522 MYLK4Q86YV6 388 aaPredicted RBP4.39□□□□□ -1.71
UBA3-204ENST00000461522 CCDC146Q8IYE0 955 aa4.39□□□□□ -1.71
UBA3-204ENST00000461522 GALNT15Q8N3T1 639 aa4.39□□□□□ -1.71
UBA3-204ENST00000461522 ZBTB8BQ8NAP8 495 aaPredicted RBP4.39□□□□□ -1.71
UBA3-204ENST00000461522 SETD9Q8NE22 299 aa4.39□□□□□ -1.71
UBA3-204ENST00000461522 LILRB1Q8NHL6 650 aaPredicted RBP4.39□□□□□ -1.71
UBA3-204ENST00000461522 CSGALNACT1Q8TDX6 532 aa4.39□□□□□ -1.71
UBA3-204ENST00000461522 POF1BQ8WVV4 589 aa4.39□□□□□ -1.71
UBA3-204ENST00000461522 NCSTNQ92542 709 aa4.39□□□□□ -1.71
UBA3-204ENST00000461522 IGSF21Q96ID5 467 aa4.39□□□□□ -1.71
UBA3-204ENST00000461522 TXNDC15Q96J42 360 aa4.39□□□□□ -1.71
UBA3-204ENST00000461522 TWSG1Q9GZX9 223 aa4.39□□□□□ -1.71
UBA3-204ENST00000461522 RETREG1Q9H6L5 497 aa4.39□□□□□ -1.71
UBA3-204ENST00000461522 GAREM1Q9H706 876 aa4.39□□□□□ -1.71
UBA3-204ENST00000461522 MVB12BQ9H7P6 319 aa4.39□□□□□ -1.71
UBA3-204ENST00000461522 WDR6Q9NNW5 1121 aaKnown RBP4.39□□□□□ -1.71
UBA3-204ENST00000461522 ATP8A2Q9NTI2 1148 aa4.39□□□□□ -1.71
UBA3-204ENST00000461522 CLDN16Q9Y5I7 305 aa4.39□□□□□ -1.71
UBA3-204ENST00000461522 PNPLA6Q8IY17 1366 aa4.39□□□□□ -1.71
UBA3-204ENST00000461522 KIF1AQ12756 1690 aa4.38□□□□□ -1.71
UBA3-204ENST00000461522 FMN2Q9NZ56 1722 aa4.38□□□□□ -1.71
UBA3-204ENST00000461522 A0A0U1RQJ8 604 aa4.38□□□□□ -1.71
UBA3-204ENST00000461522 A0A1B0GVM2 712 aa4.38□□□□□ -1.71
UBA3-204ENST00000461522 DYTNA2CJ06 578 aa4.38□□□□□ -1.71
UBA3-204ENST00000461522 IPO5O00410 1097 aaKnown RBP4.38□□□□□ -1.71
UBA3-204ENST00000461522 KRT36O76013 467 aa4.38□□□□□ -1.71
UBA3-204ENST00000461522 KRT38O76015 456 aa4.38□□□□□ -1.71
UBA3-204ENST00000461522 HSP90AA1P07900 732 aaKnown RBP4.38□□□□□ -1.71
UBA3-204ENST00000461522 VEGFAP15692 232 aaPredicted RBP4.38□□□□□ -1.71
UBA3-204ENST00000461522 PTPN9P43378 593 aa4.38□□□□□ -1.71
UBA3-204ENST00000461522 FAM27E3Q08E93 113 aa4.38□□□□□ -1.71
UBA3-204ENST00000461522 ILF3Q12906 894 aaKnown RBP eCLIP4.38□□□□□ -1.71
UBA3-204ENST00000461522 DDX10Q13206 875 aaKnown RBP4.38□□□□□ -1.71
UBA3-204ENST00000461522 HDAC1Q13547 482 aaPredicted RBP4.38□□□□□ -1.71
UBA3-204ENST00000461522 CCDC38Q502W7 563 aa4.38□□□□□ -1.71
UBA3-204ENST00000461522 JMJD6Q6NYC1 403 aaPredicted RBP4.38□□□□□ -1.71
UBA3-204ENST00000461522 RFLNBQ8N5W9 214 aa4.38□□□□□ -1.71
UBA3-204ENST00000461522 MCPH1Q8NEM0 835 aa4.38□□□□□ -1.71
UBA3-204ENST00000461522 TBC1D22AQ8WUA7 517 aa4.38□□□□□ -1.71
UBA3-204ENST00000461522 GOLGA1Q92805 767 aa4.38□□□□□ -1.71
UBA3-204ENST00000461522 SDCCAG3Q96C92 435 aa4.38□□□□□ -1.71
UBA3-204ENST00000461522 SLC39A13Q96H72 371 aa4.38□□□□□ -1.71
UBA3-204ENST00000461522 PKP4Q99569 1192 aa4.38□□□□□ -1.71
UBA3-204ENST00000461522 FBXO9Q9UK97 447 aaPredicted RBP4.38□□□□□ -1.71
UBA3-204ENST00000461522 QRICH2Q9H0J4 1663 aa4.38□□□□□ -1.71
UBA3-204ENST00000461522 PLEKHG2Q9H7P9 1386 aa4.38□□□□□ -1.71
UBA3-204ENST00000461522 NALCNQ8IZF0 1738 aa4.38□□□□□ -1.71
UBA3-204ENST00000461522 OVOS2A0A0J9YW53 1432 aa4.38□□□□□ -1.71
UBA3-204ENST00000461522 OVOS2Q6IE36 1432 aa4.38□□□□□ -1.71
UBA3-204ENST00000461522 NSD3Q9BZ95 1437 aa4.38□□□□□ -1.71
UBA3-204ENST00000461522 KAT6BQ8WYB5 2073 aa4.37□□□□□ -1.71
UBA3-204ENST00000461522 XIRP1Q702N8 1843 aaKnown RBP4.37□□□□□ -1.71
UBA3-204ENST00000461522 USP32Q8NFA0 1604 aa4.37□□□□□ -1.71
UBA3-204ENST00000461522 IGLV5-37A0A075B6J1 123 aa4.37□□□□□ -1.71
UBA3-204ENST00000461522 TTC36A6NLP5 189 aa4.37□□□□□ -1.71
UBA3-204ENST00000461522 F5H423 210 aaPredicted RBP4.37□□□□□ -1.71
UBA3-204ENST00000461522 CHL1O00533 1208 aa4.37□□□□□ -1.71
UBA3-204ENST00000461522 GRID2O43424 1007 aa4.37□□□□□ -1.71
UBA3-204ENST00000461522 ZNF500O60304 480 aaPredicted RBP4.37□□□□□ -1.71
UBA3-204ENST00000461522 FAM155BO75949 473 aa4.37□□□□□ -1.71
UBA3-204ENST00000461522 PLGP00747 810 aaPredicted RBP4.37□□□□□ -1.71
UBA3-204ENST00000461522 COPB2P35606 906 aa4.37□□□□□ -1.71
UBA3-204ENST00000461522 RHBDL3P58872 404 aa4.37□□□□□ -1.71
UBA3-204ENST00000461522 ST3GAL1Q11201 340 aa4.37□□□□□ -1.71
UBA3-204ENST00000461522 ZRSR1Q15695 479 aaKnown RBP4.37□□□□□ -1.71
UBA3-204ENST00000461522 ME3Q16798 604 aa4.37□□□□□ -1.71
UBA3-204ENST00000461522 KRTAP24-1Q3LI83 254 aa4.37□□□□□ -1.71
UBA3-204ENST00000461522 ZNF280DQ6N043 979 aa4.37□□□□□ -1.71
UBA3-204ENST00000461522 GJB7Q6PEY0 223 aa4.37□□□□□ -1.71
UBA3-204ENST00000461522 ZNF114Q8NC26 417 aa4.37□□□□□ -1.71
UBA3-204ENST00000461522 LINS1Q8NG48 757 aa4.37□□□□□ -1.71
UBA3-204ENST00000461522 CTDSP1Q9GZU7 261 aa4.37□□□□□ -1.71
UBA3-204ENST00000461522 TMX4Q9H1E5 349 aaPredicted RBP4.37□□□□□ -1.71
UBA3-204ENST00000461522 PRKRIP1Q9H875 184 aaPredicted RBP4.37□□□□□ -1.71
UBA3-204ENST00000461522 SAYSD1Q9NPB0 183 aa4.37□□□□□ -1.71
UBA3-204ENST00000461522 TLR8Q9NR97 1041 aaKnown RBP4.37□□□□□ -1.71
UBA3-204ENST00000461522 TMEM51Q9NW97 253 aa4.37□□□□□ -1.71
UBA3-204ENST00000461522 POLKQ9UBT6 870 aa4.37□□□□□ -1.71
UBA3-204ENST00000461522 SWAP70Q9UH65 585 aa4.37□□□□□ -1.71
UBA3-204ENST00000461522 CD207Q9UJ71 328 aa4.37□□□□□ -1.71
UBA3-204ENST00000461522 PARD3Q8TEW0 1356 aa4.37□□□□□ -1.71
UBA3-204ENST00000461522 TIMM23O14925 209 aa4.36□□□□□ -1.71
UBA3-204ENST00000461522 LINC01565O15544 149 aa4.36□□□□□ -1.71
UBA3-204ENST00000461522 EPB41L2O43491 1005 aaKnown RBP4.36□□□□□ -1.71
UBA3-204ENST00000461522 HBP1O60381 514 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms