RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 LEMD2Q8NC56 503 aa9.02□□□□□ -0.96
BRCA1-205ENST00000461221 OR5T3Q8NGG3 340 aa9.02□□□□□ -0.96
BRCA1-205ENST00000461221 ACOT12Q8WYK0 555 aa9.02□□□□□ -0.96
BRCA1-205ENST00000461221 FBXO6Q9NRD1 293 aaPredicted RBP9.02□□□□□ -0.96
BRCA1-205ENST00000461221 DNMT3LQ9UJW3 386 aa9.02□□□□□ -0.96
BRCA1-205ENST00000461221 CLUHO75153 1309 aa9.02□□□□□ -0.96
BRCA1-205ENST00000461221 FAM240BA0A1B0GVZ2 78 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 SAGE2PA6NJ88 616 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 XKRYO14609 159 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 REM1O75628 298 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 USP17L7P0C7H9 530 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 TNFRSF8P28908 595 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 MTTPP55157 894 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 ROR2Q01974 943 aaKnown RBP9.02□□□□□ -0.97
BRCA1-205ENST00000461221 SMU1Q2TAY7 513 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 ERICH5Q6P6B1 374 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 KLHL35Q6PF15 583 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 SNX20Q7Z614 316 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 OR52K1Q8NGK4 314 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 DNAJB3Q8WWF6 145 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 GAL3ST3Q96A11 431 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 MARK4Q96L34 752 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 TNKS2Q9H2K2 1166 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 BRD9Q9H8M2 597 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 ZFP14Q9HCL3 533 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 ZNHIT2Q9UHR6 403 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 KCNE2Q9Y6J6 123 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 ZSCAN5CA6NGD5 496 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-205ENST00000461221 LACTBL1A8MY62 500 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 FFAR3O14843 346 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 GPR42O15529 346 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 TIPRLO75663 272 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 SLC35G4P0C7Q5 338 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 PTDSS1P48651 473 aaKnown RBP9.02□□□□□ -0.97
BRCA1-205ENST00000461221 NAGLUP54802 743 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 MBTD1Q05BQ5 628 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 EIF2S3LQ2VIR3 472 aaKnown RBP9.02□□□□□ -0.97
BRCA1-205ENST00000461221 C12orf56Q8IXR9 622 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 TBC1D21Q8IYX1 336 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 HM13Q8TCT9 377 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 ZKSCAN4Q969J2 545 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-205ENST00000461221 PGLYRP2Q96PD5 576 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 ACE2Q9BYF1 805 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-205ENST00000461221 ULBP1Q9BZM6 244 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 GMIPQ9P107 970 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 RAB23Q9ULC3 237 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 RPTORQ8N122 1335 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 A8MX80 341 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 AZIN1O14977 448 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 HDAC3O15379 428 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 ENPEPQ07075 957 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 PGM5Q15124 567 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 ATP13A4Q4VNC1 1196 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 HECTD3Q5T447 861 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 LRRC38Q5VT99 294 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 CHSY3Q70JA7 882 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 SLCO6A1Q86UG4 719 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 SLC34A3Q8N130 599 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 PDPRQ8NCN5 879 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 REPS2Q8NFH8 660 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 GPR156Q8NFN8 814 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 TSEN15Q8WW01 171 aaKnown RBP9.02□□□□□ -0.97
BRCA1-205ENST00000461221 PDCD2LQ9BRP1 358 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 MUC13Q9H3R2 512 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 SNX7Q9UNH6 387 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 TMX2Q9Y320 296 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 HBS1LQ9Y450 684 aaKnown RBP9.02□□□□□ -0.97
BRCA1-205ENST00000461221 FAM237BA0A1B0GVD1 139 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 ISM1B1AKI9 464 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 ERBB2P04626 1255 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 CHKAP35790 457 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 FOLH1Q04609 750 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 CCSAPQ6IQ19 270 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-205ENST00000461221 SAMD7Q7Z3H4 446 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 SPATA19Q7Z5L4 167 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 ADAM32Q8TC27 787 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 GRIN3AQ8TCU5 1115 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 GIPC3Q8TF64 312 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 SLC9A6Q92581 669 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 MTMR8Q96EF0 704 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 OR52E6Q96RD3 313 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 FERD3LQ96RJ6 166 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 HOPXQ9BPY8 73 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-205ENST00000461221 MTRRQ9UBK8 725 aa9.02□□□□□ -0.97
BRCA1-205ENST00000461221 ERAL1O75616 437 aaKnown RBP9.01□□□□□ -0.97
BRCA1-205ENST00000461221 AKT2P31751 481 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 DNASE1L1P49184 302 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 ATN1P54259 1190 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-205ENST00000461221 ATXN7L2Q5T6C5 722 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-205ENST00000461221 LCN1P1Q5VSP4 162 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 ZCCHC12Q6PEW1 402 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 GJD3Q8N144 294 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 HPS1Q92902 700 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 C11orf24Q96F05 449 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-205ENST00000461221 C5orf34Q96MH7 638 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 KIAA1683Q9H0B3 1180 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 TTYH1Q9H313 450 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-205ENST00000461221 ADARB2Q9NS39 739 aaKnown RBP9.01□□□□□ -0.97
BRCA1-205ENST00000461221 TMEM39AQ9NV64 488 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 OR12D3Q9UGF7 316 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms