RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 ARHGEF18Q6ZSZ5 1173 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 NYAP1Q6ZVC0 841 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 USP45Q70EL2 814 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 PID1Q7Z2X4 250 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 PRUNE1Q86TP1 453 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 TSPAN33Q86UF1 283 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 TAB3Q8N5C8 712 aaPredicted RBP12.89□□□□□ -0.35
COL18A1-206ENST00000459895 GLIS1Q8NBF1 620 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 IPMKQ8NFU5 416 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 C1orf216Q8TAB5 229 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 ACTRT1Q8TDG2 376 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 CXorf40AQ8TE69 158 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 MAIP1Q8WWC4 291 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 FAM122AQ96E09 287 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 CAPZA3Q96KX2 299 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 MRGPRX2Q96LB1 330 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 FERMT1Q9BQL6 677 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 AP1M1Q9BXS5 423 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 TM9SF3Q9HD45 589 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 TTC7AQ9ULT0 858 aaPredicted RBP12.89□□□□□ -0.35
COL18A1-206ENST00000459895 TRPM6Q9BX84 2022 aa12.89□□□□□ -0.35
COL18A1-206ENST00000459895 DMXL1Q9Y485 3027 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 WDR87Q6ZQQ6 2873 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 A0A0J9YYE9 177 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 A0A1W2PQ67 120 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 C5orf60A6NFR6 353 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 IGLON5A6NGN9 336 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 A8MX80 341 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 RAD51BO15315 384 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 MMP20O60882 483 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 TRBC1P01850 177 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 CFIP05156 583 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 ITGAVP06756 1048 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 ATXN1LP0C7T5 689 aaKnown RBP12.88□□□□□ -0.35
COL18A1-206ENST00000459895 ELFN1P0C7U0 828 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 IGFALSP35858 605 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 CHRNA4P43681 627 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 LIG3P49916 1009 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 EPHB1P54762 984 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 WNT3AP56704 352 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 SF3A2Q15428 464 aaKnown RBP12.88□□□□□ -0.35
COL18A1-206ENST00000459895 CCNG2Q16589 344 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 QPCTQ16769 361 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 HS1BP3Q53T59 392 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 NEK5Q6P3R8 708 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 DRICH1Q6PGQ1 229 aaPredicted RBP12.88□□□□□ -0.35
COL18A1-206ENST00000459895 SYT10Q6XYQ8 523 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 GCNT7Q6ZNI0 430 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 KDELC2Q7Z4H8 507 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 C12orf50Q8NA57 414 aaPredicted RBP12.88□□□□□ -0.35
COL18A1-206ENST00000459895 TMEM145Q8NBT3 493 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 TRIM44Q96DX7 344 aaPredicted RBP12.88□□□□□ -0.35
COL18A1-206ENST00000459895 FEM1CQ96JP0 617 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 SERAC1Q96JX3 654 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 FICDQ9BVA6 458 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 SUSD2Q9UGT4 822 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 FAM153AQ9UHL3 310 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 PHTF1Q9UMS5 762 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 ZNF292O60281 2723 aa12.88□□□□□ -0.35
COL18A1-206ENST00000459895 LNP1A1A4G5 178 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 H0Y8X5 98 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 BCAT2O15382 392 aaPredicted RBP12.87□□□□□ -0.35
COL18A1-206ENST00000459895 SLC31A1O15431 190 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 PHF2O75151 1096 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 HEXIM1O94992 359 aaKnown RBP12.87□□□□□ -0.35
COL18A1-206ENST00000459895 METTL18O95568 372 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 IFNB1P01574 187 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 SLC4A1P02730 911 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 WNT1P04628 370 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 C1SP09871 688 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 PIRTP0C851 137 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 ETS1P14921 441 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 HNRNPA2B1P22626 353 aaKnown RBP12.87□□□□□ -0.35
COL18A1-206ENST00000459895 TGM1P22735 817 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 HNF1BP35680 557 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 DPP6P42658 865 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 KCNJ1P48048 391 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 RPL26P61254 145 aaKnown RBP12.87□□□□□ -0.35
COL18A1-206ENST00000459895 ETF1P62495 437 aaKnown RBP12.87□□□□□ -0.35
COL18A1-206ENST00000459895 CDK18Q07002 472 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 MPP3Q13368 585 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 IRF4Q15306 451 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 CYP1B1Q16678 543 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 P3H1Q32P28 736 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 TRIM61Q5EBN2 209 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 LRRC66Q68CR7 880 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 LIPIQ6XZB0 460 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 KLHDC8BQ8IXV7 354 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 IFT43Q96FT9 208 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 C1QTNF2Q9BXJ5 285 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 FSD1LQ9BXM9 530 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 CAPN10Q9HC96 672 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 AASDHPPTQ9NRN7 309 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 VPS45Q9NRW7 570 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 SEMA4GQ9NTN9 838 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 TPX2Q9ULW0 747 aaKnown RBP12.87□□□□□ -0.35
COL18A1-206ENST00000459895 RPL26L1Q9UNX3 145 aaKnown RBP12.87□□□□□ -0.35
COL18A1-206ENST00000459895 ZNF148Q9UQR1 794 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 DMTF1Q9Y222 760 aa12.87□□□□□ -0.35
COL18A1-206ENST00000459895 SPO11Q9Y5K1 396 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms