RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 CAMK1DQ8IU85 385 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 PHACTR4Q8IZ21 702 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 NDUFAF2Q8N183 169 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 ATPAF2Q8N5M1 289 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 TEX26Q8N6G2 289 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 ZNF564Q8TBZ8 553 aaPredicted RBP10.07□□□□□ -0.8
HDLBP-228ENST00000459788 CTNNBL1Q8WYA6 563 aaPredicted RBP10.07□□□□□ -0.8
HDLBP-228ENST00000459788 EXOC2Q96KP1 924 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 TSGA13Q96PP4 275 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 DEPDC7Q96QD5 511 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 ZNF670Q9BS34 389 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 ZNHIT6Q9NWK9 470 aaKnown RBP10.07□□□□□ -0.8
HDLBP-228ENST00000459788 APOBEC3BQ9UH17 382 aaKnown RBP10.07□□□□□ -0.8
HDLBP-228ENST00000459788 DNPEPQ9ULA0 475 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 PHTF1Q9UMS5 762 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 PPIL1Q9Y3C6 166 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 GPSM3Q9Y4H4 160 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 ZFHX4Q86UP3 3567 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 KIF26BQ2KJY2 2108 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 ATRXP46100 2492 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 LY6G6EA0A0G2JKS1 128 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 FFAR2O15552 330 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 OPA1O60313 960 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 DXOO77932 396 aaKnown RBP10.06□□□□□ -0.8
HDLBP-228ENST00000459788 PROSCO94903 275 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 MT-CO3P00414 261 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 ANXA6P08133 673 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 ELFN1P0C7U0 828 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 CYP2A6P11509 494 aaPredicted RBP10.06□□□□□ -0.8
HDLBP-228ENST00000459788 MX2P20592 715 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 AMPD1P23109 780 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 ACTN2P35609 894 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 ARHGAP25P42331 645 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 RGRP47804 291 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 SCNN1BP51168 640 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 ARSEP51690 589 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 HK3P52790 923 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 CYP4F3Q08477 520 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 SLC10A7Q0GE19 358 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 TARDBPQ13148 414 aaKnown RBP eCLIP10.06□□□□□ -0.8
HDLBP-228ENST00000459788 KRT81Q14533 505 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 TCEAL1Q15170 157 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 NR0B2Q15466 257 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 NFKBIBQ15653 356 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 ASTE1Q2TB18 679 aaPredicted RBP10.06□□□□□ -0.8
HDLBP-228ENST00000459788 CCDC157Q569K6 752 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 C6orf132Q5T0Z8 1188 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 MARC1Q5VT66 337 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 ESRP1Q6NXG1 681 aaKnown RBP10.06□□□□□ -0.8
HDLBP-228ENST00000459788 LIPIQ6XZB0 460 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 NLRP8Q86W28 1048 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 CBARPQ8N350 705 aaPredicted RBP10.06□□□□□ -0.8
HDLBP-228ENST00000459788 SNIP1Q8TAD8 396 aaKnown RBP10.06□□□□□ -0.8
HDLBP-228ENST00000459788 MDM1Q8TC05 714 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 CPLX3Q8WVH0 158 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 HSPH1Q92598 858 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 FAF2Q96CS3 445 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 WDR92Q96MX6 357 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 ANP32EQ9BTT0 268 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 WRAP53Q9BUR4 548 aaKnown RBP10.06□□□□□ -0.8
HDLBP-228ENST00000459788 APOOQ9BUR5 198 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 XPO4Q9C0E2 1151 aaKnown RBP10.06□□□□□ -0.8
HDLBP-228ENST00000459788 MBNL1Q9NR56 388 aaKnown RBP10.06□□□□□ -0.8
HDLBP-228ENST00000459788 KLF15Q9UIH9 416 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 U3KQA8 63 aa10.06□□□□□ -0.8
HDLBP-228ENST00000459788 BPTFQ12830 3046 aa10.05□□□□□ -0.8
HDLBP-228ENST00000459788 TMX2-CTNND1H3BSU7 103 aa10.05□□□□□ -0.8
HDLBP-228ENST00000459788 CACNB4O00305 520 aaPredicted RBP10.05□□□□□ -0.8
HDLBP-228ENST00000459788 MTA2O94776 668 aa10.05□□□□□ -0.8
HDLBP-228ENST00000459788 PYGLP06737 847 aa10.05□□□□□ -0.8
HDLBP-228ENST00000459788 TMEM253P0C7T8 217 aa10.05□□□□□ -0.8
HDLBP-228ENST00000459788 CA4P22748 312 aa10.05□□□□□ -0.8
HDLBP-228ENST00000459788 IL4RP24394 825 aa10.05□□□□□ -0.8
HDLBP-228ENST00000459788 CCNCP24863 283 aa10.05□□□□□ -0.8
HDLBP-228ENST00000459788 MMP13P45452 471 aa10.05□□□□□ -0.8
HDLBP-228ENST00000459788 RPL26P61254 145 aaKnown RBP10.05□□□□□ -0.8
HDLBP-228ENST00000459788 GALNT2Q10471 571 aa10.05□□□□□ -0.8
HDLBP-228ENST00000459788 RALGDSQ12967 914 aa10.05□□□□□ -0.8
HDLBP-228ENST00000459788 PEX6Q13608 980 aa10.05□□□□□ -0.8
HDLBP-228ENST00000459788 IFI16Q16666 785 aaKnown RBP10.05□□□□□ -0.8
HDLBP-228ENST00000459788 SMTNL2Q2TAL5 461 aa10.05□□□□□ -0.8
HDLBP-228ENST00000459788 PRRT3Q5FWE3 981 aa10.05□□□□□ -0.8
HDLBP-228ENST00000459788 TPRG1LQ5T0D9 272 aa10.05□□□□□ -0.8
HDLBP-228ENST00000459788 FAXCQ5TGI0 409 aa10.05□□□□□ -0.8
HDLBP-228ENST00000459788 ARHGAP36Q6ZRI8 547 aa10.05□□□□□ -0.8
HDLBP-228ENST00000459788 ZSWIM9Q86XI8 627 aa10.05□□□□□ -0.8
HDLBP-228ENST00000459788 GKN2Q86XP6 184 aa10.05□□□□□ -0.8
HDLBP-228ENST00000459788 RHOT2Q8IXI1 618 aa10.05□□□□□ -0.8
HDLBP-228ENST00000459788 LMX1AQ8TE12 382 aa10.05□□□□□ -0.8
HDLBP-228ENST00000459788 MAML1Q92585 1016 aa10.05□□□□□ -0.8
HDLBP-228ENST00000459788 SCRN2Q96FV2 425 aa10.05□□□□□ -0.8
HDLBP-228ENST00000459788 MCCC1Q96RQ3 725 aaPredicted RBP10.05□□□□□ -0.8
HDLBP-228ENST00000459788 LRRC61Q9BV99 259 aa10.05□□□□□ -0.8
HDLBP-228ENST00000459788 POLR1EQ9GZS1 481 aaKnown RBP10.05□□□□□ -0.8
HDLBP-228ENST00000459788 ABCG4Q9H172 646 aa10.05□□□□□ -0.8
HDLBP-228ENST00000459788 ETNK2Q9NVF9 386 aa10.05□□□□□ -0.8
HDLBP-228ENST00000459788 CTTNBP2NLQ9P2B4 639 aa10.05□□□□□ -0.8
HDLBP-228ENST00000459788 INTUQ9ULD6 942 aa10.05□□□□□ -0.8
HDLBP-228ENST00000459788 RPL26L1Q9UNX3 145 aaKnown RBP10.05□□□□□ -0.8
HDLBP-228ENST00000459788 SCN8AQ9UQD0 1980 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms