RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 BUB1BO60566 1050 aaPredicted RBP21.66■■□□□ 1.06
CPNE1-220ENST00000458038 PALMO75781 387 aa21.66■■□□□ 1.06
CPNE1-220ENST00000458038 PNLIPP16233 465 aa21.66■■□□□ 1.06
CPNE1-220ENST00000458038 GLB1P16278 677 aa21.66■■□□□ 1.06
CPNE1-220ENST00000458038 INHBCP55103 352 aa21.66■■□□□ 1.06
CPNE1-220ENST00000458038 KIAA1024LP59773 190 aa21.66■■□□□ 1.06
CPNE1-220ENST00000458038 CCL7P80098 99 aa21.66■■□□□ 1.06
CPNE1-220ENST00000458038 CLN3Q13286 438 aa21.66■■□□□ 1.06
CPNE1-220ENST00000458038 RFTN1Q14699 578 aaPredicted RBP21.66■■□□□ 1.06
CPNE1-220ENST00000458038 OGFOD3Q6PK18 319 aa21.66■■□□□ 1.06
CPNE1-220ENST00000458038 XKR5Q6UX68 686 aa21.66■■□□□ 1.06
CPNE1-220ENST00000458038 CAMK1DQ8IU85 385 aa21.66■■□□□ 1.06
CPNE1-220ENST00000458038 MCOLN2Q8IZK6 566 aa21.66■■□□□ 1.06
CPNE1-220ENST00000458038 GPR156Q8NFN8 814 aa21.66■■□□□ 1.06
CPNE1-220ENST00000458038 LRRN3Q9H3W5 708 aa21.66■■□□□ 1.06
CPNE1-220ENST00000458038 EPB41L5Q9HCM4 733 aa21.66■■□□□ 1.06
CPNE1-220ENST00000458038 B8ZZF3 427 aa21.65■■□□□ 1.06
CPNE1-220ENST00000458038 J3KR12 359 aa21.65■■□□□ 1.06
CPNE1-220ENST00000458038 CACNB4O00305 520 aaPredicted RBP21.65■■□□□ 1.06
CPNE1-220ENST00000458038 FERP16591 822 aa21.65■■□□□ 1.06
CPNE1-220ENST00000458038 UGT1A5P35504 534 aa21.65■■□□□ 1.06
CPNE1-220ENST00000458038 ZNF135P52742 658 aaPredicted RBP21.65■■□□□ 1.06
CPNE1-220ENST00000458038 UBXN1Q04323 297 aa21.65■■□□□ 1.06
CPNE1-220ENST00000458038 CLEC17AQ6ZS10 378 aa21.65■■□□□ 1.06
CPNE1-220ENST00000458038 OR56A4Q8NGH8 313 aa21.65■■□□□ 1.06
CPNE1-220ENST00000458038 PARVAQ9NVD7 372 aa21.65■■□□□ 1.06
CPNE1-220ENST00000458038 KCTD5Q9NXV2 234 aa21.65■■□□□ 1.06
CPNE1-220ENST00000458038 RABGEF1Q9UJ41 708 aa21.65■■□□□ 1.06
CPNE1-220ENST00000458038 AP4E1Q9UPM8 1137 aa21.65■■□□□ 1.06
CPNE1-220ENST00000458038 SPTA1P02549 2419 aa21.65■■□□□ 1.06
CPNE1-220ENST00000458038 SCN8AQ9UQD0 1980 aa21.65■■□□□ 1.06
CPNE1-220ENST00000458038 PDE2AO00408 941 aaPredicted RBP21.64■■□□□ 1.05
CPNE1-220ENST00000458038 EEF2KO00418 725 aaKnown RBP21.64■■□□□ 1.05
CPNE1-220ENST00000458038 NVLO15381 856 aaKnown RBP21.64■■□□□ 1.05
CPNE1-220ENST00000458038 ZIC2O95409 532 aaPredicted RBP21.64■■□□□ 1.05
CPNE1-220ENST00000458038 PCCBP05166 539 aa21.64■■□□□ 1.05
CPNE1-220ENST00000458038 RPLP0P05388 317 aaKnown RBP21.64■■□□□ 1.05
CPNE1-220ENST00000458038 SLC5A2P31639 672 aa21.64■■□□□ 1.05
CPNE1-220ENST00000458038 TRIM23P36406 574 aa21.64■■□□□ 1.05
CPNE1-220ENST00000458038 PAPOLAP51003 745 aaKnown RBP21.64■■□□□ 1.05
CPNE1-220ENST00000458038 BCL2L1Q07817 233 aa21.64■■□□□ 1.05
CPNE1-220ENST00000458038 LY6DQ14210 128 aa21.64■■□□□ 1.05
CPNE1-220ENST00000458038 ZSCAN23Q3MJ62 389 aa21.64■■□□□ 1.05
CPNE1-220ENST00000458038 ERMARDQ5T6L9 678 aa21.64■■□□□ 1.05
CPNE1-220ENST00000458038 LIPIQ6XZB0 460 aa21.64■■□□□ 1.05
CPNE1-220ENST00000458038 RBM43Q6ZSC3 357 aaKnown RBP21.64■■□□□ 1.05
CPNE1-220ENST00000458038 B3GNT8Q7Z7M8 397 aa21.64■■□□□ 1.05
CPNE1-220ENST00000458038 CCNJLQ8IV13 435 aa21.64■■□□□ 1.05
CPNE1-220ENST00000458038 FAM46DQ8NEK8 389 aa21.64■■□□□ 1.05
CPNE1-220ENST00000458038 ECHDC3Q96DC8 303 aa21.64■■□□□ 1.05
CPNE1-220ENST00000458038 SLC39A8Q9C0K1 460 aa21.64■■□□□ 1.05
CPNE1-220ENST00000458038 A0A1W2PQM1 296 aa21.63■■□□□ 1.05
CPNE1-220ENST00000458038 PMS2P1A4D2B8 440 aa21.63■■□□□ 1.05
CPNE1-220ENST00000458038 DAPK3O43293 454 aa21.63■■□□□ 1.05
CPNE1-220ENST00000458038 RECQL5O94762 991 aaPredicted RBP21.63■■□□□ 1.05
CPNE1-220ENST00000458038 ELFN1P0C7U0 828 aa21.63■■□□□ 1.05
CPNE1-220ENST00000458038 JMJD7P0C870 316 aa21.63■■□□□ 1.05
CPNE1-220ENST00000458038 CDK11BP21127 795 aaKnown RBP21.63■■□□□ 1.05
CPNE1-220ENST00000458038 RENBPP51606 427 aa21.63■■□□□ 1.05
CPNE1-220ENST00000458038 MYL5Q02045 173 aa21.63■■□□□ 1.05
CPNE1-220ENST00000458038 TSR1Q2NL82 804 aaKnown RBP21.63■■□□□ 1.05
CPNE1-220ENST00000458038 CERCAMQ5T4B2 595 aa21.63■■□□□ 1.05
CPNE1-220ENST00000458038 AFMIDQ63HM1 303 aa21.63■■□□□ 1.05
CPNE1-220ENST00000458038 TAF8Q7Z7C8 310 aa21.63■■□□□ 1.05
CPNE1-220ENST00000458038 PSTKQ8IV42 348 aaKnown RBP21.63■■□□□ 1.05
CPNE1-220ENST00000458038 PAF1Q8N7H5 531 aa21.63■■□□□ 1.05
CPNE1-220ENST00000458038 TSEN2Q8NCE0 465 aaKnown RBP21.63■■□□□ 1.05
CPNE1-220ENST00000458038 SPOCK2Q92563 424 aa21.63■■□□□ 1.05
CPNE1-220ENST00000458038 CELF6Q96J87 481 aaKnown RBP21.63■■□□□ 1.05
CPNE1-220ENST00000458038 CINPQ9BW66 212 aaPredicted RBP21.63■■□□□ 1.05
CPNE1-220ENST00000458038 ANO10Q9NW15 660 aa21.63■■□□□ 1.05
CPNE1-220ENST00000458038 MYO6Q9UM54 1294 aa21.63■■□□□ 1.05
CPNE1-220ENST00000458038 MYO18BQ8IUG5 2567 aa21.62■■□□□ 1.05
CPNE1-220ENST00000458038 A0A1W2PQ67 120 aa21.62■■□□□ 1.05
CPNE1-220ENST00000458038 CASC3O15234 703 aaKnown RBP21.62■■□□□ 1.05
CPNE1-220ENST00000458038 RNF8O76064 485 aa21.62■■□□□ 1.05
CPNE1-220ENST00000458038 NFKBIAP25963 317 aa21.62■■□□□ 1.05
CPNE1-220ENST00000458038 HCAR3P49019 387 aa21.62■■□□□ 1.05
CPNE1-220ENST00000458038 AP1S1P61966 158 aa21.62■■□□□ 1.05
CPNE1-220ENST00000458038 IL10RBQ08334 325 aa21.62■■□□□ 1.05
CPNE1-220ENST00000458038 TMCO4Q5TGY1 634 aa21.62■■□□□ 1.05
CPNE1-220ENST00000458038 DPPA4Q7L190 304 aa21.62■■□□□ 1.05
CPNE1-220ENST00000458038 ZSWIM9Q86XI8 627 aa21.62■■□□□ 1.05
CPNE1-220ENST00000458038 JAMLQ86YT9 394 aa21.62■■□□□ 1.05
CPNE1-220ENST00000458038 LZTR1Q8N653 840 aa21.62■■□□□ 1.05
CPNE1-220ENST00000458038 PLA2G15Q8NCC3 412 aa21.62■■□□□ 1.05
CPNE1-220ENST00000458038 OR1E3Q8WZA6 343 aa21.62■■□□□ 1.05
CPNE1-220ENST00000458038 FUBP1Q96AE4 644 aaKnown RBP21.62■■□□□ 1.05
CPNE1-220ENST00000458038 PDXPQ96GD0 296 aa21.62■■□□□ 1.05
CPNE1-220ENST00000458038 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.62■■□□□ 1.05
CPNE1-220ENST00000458038 FOXP3Q9BZS1 431 aa21.62■■□□□ 1.05
CPNE1-220ENST00000458038 DHX35Q9H5Z1 703 aaKnown RBP21.62■■□□□ 1.05
CPNE1-220ENST00000458038 SEPT10Q9P0V9 454 aa21.62■■□□□ 1.05
CPNE1-220ENST00000458038 BOD1L1Q8NFC6 3051 aa21.61■■□□□ 1.05
CPNE1-220ENST00000458038 TMEM202A6NGA9 273 aa21.61■■□□□ 1.05
CPNE1-220ENST00000458038 ZW10O43264 779 aa21.61■■□□□ 1.05
CPNE1-220ENST00000458038 NUDT21O43809 227 aaKnown RBP21.61■■□□□ 1.05
CPNE1-220ENST00000458038 TNFAIP3P21580 790 aa21.61■■□□□ 1.05
CPNE1-220ENST00000458038 PSMA2P25787 234 aa21.61■■□□□ 1.05
CPNE1-220ENST00000458038 OGDHQ02218 1023 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms