RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 MATKP42679 507 aa16.41■□□□□ 0.22
LSS-205ENST00000457828 ZNF132P52740 706 aa16.41■□□□□ 0.22
LSS-205ENST00000457828 GHRHRQ02643 423 aa16.41■□□□□ 0.22
LSS-205ENST00000457828 NFYCQ13952 458 aa16.41■□□□□ 0.22
LSS-205ENST00000457828 MBLAC2Q68D91 279 aa16.41■□□□□ 0.22
LSS-205ENST00000457828 GET4Q7L5D6 327 aaPredicted RBP16.41■□□□□ 0.22
LSS-205ENST00000457828 FAR2Q96K12 515 aa16.41■□□□□ 0.22
LSS-205ENST00000457828 IL22Q9GZX6 179 aa16.41■□□□□ 0.22
LSS-205ENST00000457828 A0A1W2PQH9 124 aa16.41■□□□□ 0.22
LSS-205ENST00000457828 MSI1O43347 362 aaKnown RBP16.41■□□□□ 0.22
LSS-205ENST00000457828 LZTS3O60299 673 aaPredicted RBP16.41■□□□□ 0.22
LSS-205ENST00000457828 TYMPP19971 482 aa16.41■□□□□ 0.22
LSS-205ENST00000457828 NPY2RP49146 381 aa16.41■□□□□ 0.22
LSS-205ENST00000457828 GRM3Q14832 879 aa16.41■□□□□ 0.22
LSS-205ENST00000457828 CTC1Q2NKJ3 1217 aa16.41■□□□□ 0.22
LSS-205ENST00000457828 SAMD4BQ5PRF9 694 aaKnown RBP16.41■□□□□ 0.22
LSS-205ENST00000457828 ZNF567Q8N184 647 aa16.41■□□□□ 0.22
LSS-205ENST00000457828 USP29Q9HBJ7 922 aa16.41■□□□□ 0.22
LSS-205ENST00000457828 MRGBPQ9NV56 204 aa16.41■□□□□ 0.22
LSS-205ENST00000457828 PKP3Q9Y446 797 aa16.41■□□□□ 0.22
LSS-205ENST00000457828 PTPRZ1P23471 2315 aaPredicted RBP16.41■□□□□ 0.22
LSS-205ENST00000457828 SLC11A1P49279 550 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 PQLC3Q8N755 202 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 ARHGEF4Q9NR80 690 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 EURLQ9NYK6 297 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 MFHAS1Q9Y4C4 1052 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 STYXL1Q9Y6J8 313 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 MYO18AQ92614 2054 aaKnown RBP16.4■□□□□ 0.22
LSS-205ENST00000457828 TPP2P29144 1249 aaPredicted RBP16.4■□□□□ 0.22
LSS-205ENST00000457828 SLC7A2P52569 658 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 GEMP55040 296 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 ZNF460Q14592 562 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 CYP51A1Q16850 503 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 ING5Q8WYH8 240 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 RBBP8Q99708 897 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 C1orf21Q9H246 121 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 PFKMP08237 780 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 MLNP12872 115 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 RFC2P35250 354 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 TMED10P49755 219 aaKnown RBP16.4■□□□□ 0.22
LSS-205ENST00000457828 LIMK2P53671 638 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 ZRANB3Q5FWF4 1079 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 METTL21CQ5VZV1 264 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 SCARA3Q6AZY7 606 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.4■□□□□ 0.225e-8■■□□□ 14.1
LSS-205ENST00000457828 ARAP2Q8WZ64 1704 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 GATA6Q92908 595 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 EGFL8Q99944 293 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 SLC25A23Q9BV35 468 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 PCDHAC1Q9H158 963 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 SCUBE2Q9NQ36 999 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 PTTG2Q9NZH5 202 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 A0A087WXM4 84 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 C1orf232A0A0U1RR37 186 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 ERI2A8K979 691 aaKnown RBP16.4■□□□□ 0.22
LSS-205ENST00000457828 KDM1AO60341 852 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 DHRS4L1P0CG22 281 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 HADHAP40939 763 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 PCLAFQ15004 111 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 CCDC126Q96EE4 140 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 PPP1R2P1Q96PQ5 205 aa16.4■□□□□ 0.22
LSS-205ENST00000457828 NCAM2O15394 837 aa16.39■□□□□ 0.21
LSS-205ENST00000457828 FGF3P11487 239 aaPredicted RBP16.39■□□□□ 0.21
LSS-205ENST00000457828 COL6A1P12109 1028 aa16.39■□□□□ 0.21
LSS-205ENST00000457828 RENBPP51606 427 aa16.39■□□□□ 0.21
LSS-205ENST00000457828 PATL1Q86TB9 770 aaKnown RBP16.39■□□□□ 0.21
LSS-205ENST00000457828 ZNF280BQ86YH2 543 aa16.39■□□□□ 0.21
LSS-205ENST00000457828 ZBTB18Q99592 522 aa16.39■□□□□ 0.21
LSS-205ENST00000457828 ADAMTS10Q9H324 1103 aa16.39■□□□□ 0.21
LSS-205ENST00000457828 SHANK3Q9BYB0 1731 aa16.39■□□□□ 0.21
LSS-205ENST00000457828 LZTR1Q8N653 840 aa16.39■□□□□ 0.21
LSS-205ENST00000457828 ARFGAP1Q8N6T3 406 aa16.39■□□□□ 0.21
LSS-205ENST00000457828 BBS2Q9BXC9 721 aa16.39■□□□□ 0.21
LSS-205ENST00000457828 SPAG4Q9NPE6 437 aa16.39■□□□□ 0.21
LSS-205ENST00000457828 HACD3Q9P035 362 aa16.39■□□□□ 0.21
LSS-205ENST00000457828 C9JVG2 144 aa16.39■□□□□ 0.21
LSS-205ENST00000457828 ALDOAP04075 364 aaKnown RBP16.39■□□□□ 0.21
LSS-205ENST00000457828 CDH13P55290 713 aa16.39■□□□□ 0.21
LSS-205ENST00000457828 MTA1Q13330 715 aa16.39■□□□□ 0.21
LSS-205ENST00000457828 SEMA5AQ13591 1074 aa16.39■□□□□ 0.21
LSS-205ENST00000457828 GTF2H3Q13889 308 aa16.39■□□□□ 0.21
LSS-205ENST00000457828 ADGRE1Q14246 886 aa16.39■□□□□ 0.21
LSS-205ENST00000457828 TRIM16LQ309B1 348 aa16.39■□□□□ 0.21
LSS-205ENST00000457828 LRTOMTQ8WZ04 291 aa16.39■□□□□ 0.21
LSS-205ENST00000457828 LPGAT1Q92604 370 aa16.39■□□□□ 0.21
LSS-205ENST00000457828 HNRNPABQ99729 332 aaKnown RBP16.39■□□□□ 0.21
LSS-205ENST00000457828 XYLT2Q9H1B5 865 aa16.39■□□□□ 0.21
LSS-205ENST00000457828 PNPLA8Q9NP80 782 aa16.39■□□□□ 0.21
LSS-205ENST00000457828 LATS2Q9NRM7 1088 aa16.39■□□□□ 0.21
LSS-205ENST00000457828 ANKRD6Q9Y2G4 727 aa16.39■□□□□ 0.21
LSS-205ENST00000457828 IGKV6-21A0A0C4DH24 114 aa16.38■□□□□ 0.21
LSS-205ENST00000457828 FAM149AA5PLN7 773 aa16.38■□□□□ 0.21
LSS-205ENST00000457828 KPNA3O00505 521 aaPredicted RBP16.38■□□□□ 0.21
LSS-205ENST00000457828 SNRPB2P08579 225 aaKnown RBP16.38■□□□□ 0.21
LSS-205ENST00000457828 SERPINF2P08697 491 aa16.38■□□□□ 0.21
LSS-205ENST00000457828 RBP1P09455 135 aa16.38■□□□□ 0.21
LSS-205ENST00000457828 CCDC166P0CW27 439 aa16.38■□□□□ 0.21
LSS-205ENST00000457828 CHRM1P11229 460 aaPredicted RBP16.38■□□□□ 0.21
LSS-205ENST00000457828 L1CAMP32004 1257 aa16.38■□□□□ 0.21
LSS-205ENST00000457828 AGMOQ6ZNB7 445 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms