RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 RNF220Q5VTB9 566 aa20.17■□□□□ 0.82
CSPG5-203ENST00000456150 FAM45BPQ6NSW5 357 aa20.17■□□□□ 0.82
CSPG5-203ENST00000456150 CHSY3Q70JA7 882 aa20.17■□□□□ 0.82
CSPG5-203ENST00000456150 SLC24A5Q71RS6 500 aa20.17■□□□□ 0.82
CSPG5-203ENST00000456150 CUZD1Q86UP6 607 aa20.17■□□□□ 0.82
CSPG5-203ENST00000456150 FAM45AQ8TCE6 357 aa20.17■□□□□ 0.82
CSPG5-203ENST00000456150 GBP5Q96PP8 586 aa20.17■□□□□ 0.82
CSPG5-203ENST00000456150 UTP6Q9NYH9 597 aaKnown RBP20.17■□□□□ 0.82
CSPG5-203ENST00000456150 UXTQ9UBK9 157 aaPredicted RBP20.17■□□□□ 0.82
CSPG5-203ENST00000456150 TCAF2A6NFQ2 919 aa20.16■□□□□ 0.82
CSPG5-203ENST00000456150 SYN3O14994 580 aa20.16■□□□□ 0.82
CSPG5-203ENST00000456150 RAMP2O60895 175 aa20.16■□□□□ 0.82
CSPG5-203ENST00000456150 PENKP01210 267 aaPredicted RBP20.16■□□□□ 0.82
CSPG5-203ENST00000456150 XRCC1P18887 633 aaPredicted RBP20.16■□□□□ 0.82
CSPG5-203ENST00000456150 YWHAQP27348 245 aa20.16■□□□□ 0.82
CSPG5-203ENST00000456150 PEX19P40855 299 aa20.16■□□□□ 0.82
CSPG5-203ENST00000456150 ALDH1A3P47895 512 aa20.16■□□□□ 0.82
CSPG5-203ENST00000456150 SQLEQ14534 574 aa20.16■□□□□ 0.82
CSPG5-203ENST00000456150 POLD3Q15054 466 aaPredicted RBP20.16■□□□□ 0.82
CSPG5-203ENST00000456150 CLLU1OSQ5K130 101 aa20.16■□□□□ 0.82
CSPG5-203ENST00000456150 FBXL22Q6P050 247 aa20.16■□□□□ 0.82
CSPG5-203ENST00000456150 SPPL2BQ8TCT7 592 aa20.16■□□□□ 0.82
CSPG5-203ENST00000456150 FBXO32Q969P5 355 aa20.16■□□□□ 0.82
CSPG5-203ENST00000456150 HDAC10Q969S8 669 aa20.16■□□□□ 0.82
CSPG5-203ENST00000456150 FAM193BQ96PV7 902 aaPredicted RBP20.16■□□□□ 0.82
CSPG5-203ENST00000456150 TUBGCP5Q96RT8 1024 aa20.16■□□□□ 0.82
CSPG5-203ENST00000456150 MRPL1Q9BYD6 325 aaKnown RBP20.16■□□□□ 0.82
CSPG5-203ENST00000456150 MRPL40Q9NQ50 206 aaKnown RBP20.16■□□□□ 0.82
CSPG5-203ENST00000456150 PACSIN3Q9UKS6 424 aa20.16■□□□□ 0.82
CSPG5-203ENST00000456150 DTNAQ9Y4J8 743 aa20.16■□□□□ 0.82
CSPG5-203ENST00000456150 LOC285095A0A1B0GVY8 99 aa20.15■□□□□ 0.82
CSPG5-203ENST00000456150 FAM92AA1XBS5 289 aa20.15■□□□□ 0.82
CSPG5-203ENST00000456150 DRGXA6NNA5 263 aa20.15■□□□□ 0.82
CSPG5-203ENST00000456150 RNASEH1O60930 286 aaKnown RBP20.15■□□□□ 0.82
CSPG5-203ENST00000456150 RTN3O95197 1032 aaPredicted RBP20.15■□□□□ 0.82
CSPG5-203ENST00000456150 S1PR4O95977 384 aa20.15■□□□□ 0.82
CSPG5-203ENST00000456150 ZCCHC18P0CG32 403 aa20.15■□□□□ 0.82
CSPG5-203ENST00000456150 HOXB8P17481 243 aaPredicted RBP20.15■□□□□ 0.82
CSPG5-203ENST00000456150 KCNA5P22460 613 aa20.15■□□□□ 0.82
CSPG5-203ENST00000456150 PRMT2P55345 433 aa20.15■□□□□ 0.82
CSPG5-203ENST00000456150 STX5Q13190 355 aa20.15■□□□□ 0.82
CSPG5-203ENST00000456150 CEACAM7Q14002 265 aa20.15■□□□□ 0.82
CSPG5-203ENST00000456150 VARS2Q5ST30 1063 aaKnown RBP20.15■□□□□ 0.82
CSPG5-203ENST00000456150 RARS2Q5T160 578 aaKnown RBP20.15■□□□□ 0.82
CSPG5-203ENST00000456150 RAP1GAP2Q684P5 730 aa20.15■□□□□ 0.82
CSPG5-203ENST00000456150 CATSPER1Q8NEC5 780 aa20.15■□□□□ 0.82
CSPG5-203ENST00000456150 ARRDC2Q8TBH0 407 aa20.15■□□□□ 0.82
CSPG5-203ENST00000456150 PIP4K2CQ8TBX8 421 aa20.15■□□□□ 0.82
CSPG5-203ENST00000456150 PEX13Q92968 403 aa20.15■□□□□ 0.82
CSPG5-203ENST00000456150 SUDS3Q9H7L9 328 aaPredicted RBP20.15■□□□□ 0.82
CSPG5-203ENST00000456150 TLR8Q9NR97 1041 aaKnown RBP20.15■□□□□ 0.82
CSPG5-203ENST00000456150 FIS1Q9Y3D6 152 aa20.15■□□□□ 0.82
CSPG5-203ENST00000456150 WISP3O95389 354 aaPredicted RBP20.15■□□□□ 0.82
CSPG5-203ENST00000456150 VCLP18206 1134 aa20.15■□□□□ 0.82
CSPG5-203ENST00000456150 CCNHP51946 323 aaPredicted RBP20.15■□□□□ 0.82
CSPG5-203ENST00000456150 INHBCP55103 352 aa20.15■□□□□ 0.82
CSPG5-203ENST00000456150 PKNOX1P55347 436 aa20.15■□□□□ 0.82
CSPG5-203ENST00000456150 MMEL1Q495T6 779 aa20.15■□□□□ 0.82
CSPG5-203ENST00000456150 ST13P4Q8IZP2 240 aaPredicted RBP20.15■□□□□ 0.82
CSPG5-203ENST00000456150 USP13Q92995 863 aaPredicted RBP20.15■□□□□ 0.82
CSPG5-203ENST00000456150 IGSF8Q969P0 613 aa20.15■□□□□ 0.82
CSPG5-203ENST00000456150 LRGUKQ96M69 825 aa20.15■□□□□ 0.82
CSPG5-203ENST00000456150 BEGAINQ9BUH8 593 aa20.15■□□□□ 0.82
CSPG5-203ENST00000456150 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.15■□□□□ 0.82
CSPG5-203ENST00000456150 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.15■□□□□ 0.82
CSPG5-203ENST00000456150 MARCH2Q9P0N8 246 aa20.15■□□□□ 0.82
CSPG5-203ENST00000456150 PRG3Q9Y2Y8 225 aaPredicted RBP20.15■□□□□ 0.82
CSPG5-203ENST00000456150 UBDO15205 165 aa20.14■□□□□ 0.81
CSPG5-203ENST00000456150 BCAS2O75934 225 aaPredicted RBP20.14■□□□□ 0.81
CSPG5-203ENST00000456150 ATXN1LP0C7T5 689 aaKnown RBP20.14■□□□□ 0.81
CSPG5-203ENST00000456150 PIM1P11309 404 aaPredicted RBP20.14■□□□□ 0.81
CSPG5-203ENST00000456150 IMPDH1P20839 514 aa20.14■□□□□ 0.81
CSPG5-203ENST00000456150 PBX3P40426 434 aa20.14■□□□□ 0.81
CSPG5-203ENST00000456150 MAPKAPK2P49137 400 aa20.14■□□□□ 0.81
CSPG5-203ENST00000456150 YBEYP58557 167 aaPredicted RBP20.14■□□□□ 0.81
CSPG5-203ENST00000456150 SERINC3Q13530 473 aa20.14■□□□□ 0.81
CSPG5-203ENST00000456150 CTXN3Q4LDR2 81 aa20.14■□□□□ 0.81
CSPG5-203ENST00000456150 RTN4RL1Q86UN2 441 aaPredicted RBP20.14■□□□□ 0.81
CSPG5-203ENST00000456150 ANKRD49Q8WVL7 239 aa20.14■□□□□ 0.81
CSPG5-203ENST00000456150 L3HYPDHQ96EM0 354 aa20.14■□□□□ 0.81
CSPG5-203ENST00000456150 TMA16Q96EY4 203 aaKnown RBP20.14■□□□□ 0.81
CSPG5-203ENST00000456150 RPRD1AQ96P16 312 aaPredicted RBP20.14■□□□□ 0.81
CSPG5-203ENST00000456150 NPAS2Q99743 824 aa20.14■□□□□ 0.81
CSPG5-203ENST00000456150 DDX50Q9BQ39 737 aaKnown RBP20.14■□□□□ 0.81
CSPG5-203ENST00000456150 POLR1EQ9GZS1 481 aaKnown RBP20.14■□□□□ 0.81
CSPG5-203ENST00000456150 SLC24A3Q9HC58 644 aa20.14■□□□□ 0.81
CSPG5-203ENST00000456150 TRIM38O00635 465 aa20.14■□□□□ 0.81
CSPG5-203ENST00000456150 LDB2O43679 373 aa20.14■□□□□ 0.81
CSPG5-203ENST00000456150 FESP07332 822 aa20.14■□□□□ 0.81
CSPG5-203ENST00000456150 HLA-DPA1P20036 260 aa20.14■□□□□ 0.81
CSPG5-203ENST00000456150 ARSDP51689 593 aa20.14■□□□□ 0.81
CSPG5-203ENST00000456150 IRX1P78414 480 aaPredicted RBP20.14■□□□□ 0.81
CSPG5-203ENST00000456150 MRPS22P82650 360 aaKnown RBP20.14■□□□□ 0.81
CSPG5-203ENST00000456150 ACVR1Q04771 509 aa20.14■□□□□ 0.81
CSPG5-203ENST00000456150 MTA1Q13330 715 aa20.14■□□□□ 0.81
CSPG5-203ENST00000456150 PTK2BQ14289 1009 aa20.14■□□□□ 0.81
CSPG5-203ENST00000456150 C10orf120Q5SQS8 335 aa20.14■□□□□ 0.81
CSPG5-203ENST00000456150 GK5Q6ZS86 529 aa20.14■□□□□ 0.81
CSPG5-203ENST00000456150 MIB1Q86YT6 1006 aa20.14■□□□□ 0.81
CSPG5-203ENST00000456150 PGBD5Q8N414 524 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms