RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 CDX2Q99626 313 aaPredicted RBP6.03□□□□□ -1.44
SDC4P-201ENST00000453285 ADGRE3Q9BY15 652 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 CIPCQ9C0C6 399 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 TMEM245Q9H330 911 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 MTG2Q9H4K7 406 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 SUV39H2Q9H5I1 410 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 UBE2ZQ9H832 354 aaPredicted RBP6.03□□□□□ -1.44
SDC4P-201ENST00000453285 FBRSL1Q9HCM7 1045 aaKnown RBP6.03□□□□□ -1.44
SDC4P-201ENST00000453285 IARS2Q9NSE4 1012 aaKnown RBP6.03□□□□□ -1.44
SDC4P-201ENST00000453285 C20orf96Q9NUD7 363 aaPredicted RBP6.03□□□□□ -1.44
SDC4P-201ENST00000453285 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.03□□□□□ -1.44
SDC4P-201ENST00000453285 GGT7Q9UJ14 662 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 RPL26L1Q9UNX3 145 aaKnown RBP6.03□□□□□ -1.44
SDC4P-201ENST00000453285 PCDHB9Q9Y5E1 797 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 ACTL7BQ9Y614 415 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 ARL5AQ9Y689 179 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 WASF2Q9Y6W5 498 aa6.03□□□□□ -1.44
SDC4P-201ENST00000453285 EYSQ5T1H1 3165 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 ZFC3H1O60293 1989 aaKnown RBP6.02□□□□□ -1.45
SDC4P-201ENST00000453285 CEP192Q8TEP8 1941 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 PRUNE2Q8WUY3 3088 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 A0A0J9YYE9 177 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 A0A0U1RQS6 177 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 IQANK1A0A1B0GTG1 560 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 TSPAN11A1L157 253 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.02□□□□□ -1.45
SDC4P-201ENST00000453285 TRIM49D1C9J1S8 452 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 GOLGA8TH3BQL2 631 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 SLC7A4O43246 635 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 BUD23O43709 281 aaKnown RBP6.02□□□□□ -1.45
SDC4P-201ENST00000453285 RFPL1O75677 317 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 KAT7O95251 611 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 CRTAMO95727 393 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 TRBC1P01850 177 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 CTSLP07711 333 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 INHBAP08476 426 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 F7P08709 466 aaPredicted RBP6.02□□□□□ -1.45
SDC4P-201ENST00000453285 SNRPAP09012 282 aaKnown RBP6.02□□□□□ -1.45
SDC4P-201ENST00000453285 ALPIP09923 528 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 ATXN8OSP0DMR3 200 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 CTPS1P17812 591 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 NR1D1P20393 614 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 LPOP22079 712 aaPredicted RBP6.02□□□□□ -1.45
SDC4P-201ENST00000453285 KCNA5P22460 613 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 CA4P22748 312 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 SP100P23497 879 aaPredicted RBP6.02□□□□□ -1.45
SDC4P-201ENST00000453285 SERPINA4P29622 427 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 ATP5DP30049 168 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 GP5P40197 560 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 NNMTP40261 264 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 ABL2P42684 1182 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 GRIA4P48058 902 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 SOX9P48436 509 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 SERPINB9P50453 376 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 CSRP3P50461 194 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 GALK1P51570 392 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 SLC18A2Q05940 514 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 LAMB3Q13751 1172 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 ENPP2Q13822 863 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 ZNF234Q14588 700 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 GRM3Q14832 879 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 EIF4HQ15056 248 aaKnown RBP6.02□□□□□ -1.45
SDC4P-201ENST00000453285 SMAD1Q15797 465 aaKnown RBP6.02□□□□□ -1.45
SDC4P-201ENST00000453285 CCDC85BQ15834 202 aaPredicted RBP6.02□□□□□ -1.45
SDC4P-201ENST00000453285 C9orf64Q5T6V5 341 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 GRTP1Q5TC63 336 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 PRPF38BQ5VTL8 546 aaKnown RBP6.02□□□□□ -1.45
SDC4P-201ENST00000453285 GPR153Q6NV75 609 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 GDPD4Q6W3E5 623 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 TIFABQ6ZNK6 161 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 Q7L0L9 218 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 RASSF3Q86WH2 238 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 DENND6AQ8IWF6 608 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 SRRM1Q8IYB3 904 aaKnown RBP6.02□□□□□ -1.45
SDC4P-201ENST00000453285 RYBPQ8N488 228 aaPredicted RBP6.02□□□□□ -1.45
SDC4P-201ENST00000453285 SLC44A3Q8N4M1 653 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 ZNF366Q8N895 744 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 FAM76AQ8TAV0 307 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 PDCD6IPQ8WUM4 868 aaKnown RBP6.02□□□□□ -1.45
SDC4P-201ENST00000453285 CDKL2Q92772 493 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 EZH1Q92800 747 aaPredicted RBP6.02□□□□□ -1.45
SDC4P-201ENST00000453285 HDAC10Q969S8 669 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 CDKN2AIPNLQ96HQ2 116 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 SERAC1Q96JX3 654 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 DNAJC1Q96KC8 554 aaKnown RBP6.02□□□□□ -1.45
SDC4P-201ENST00000453285 TBATAQ96M53 351 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 ZNF641Q96N77 438 aaPredicted RBP6.02□□□□□ -1.45
SDC4P-201ENST00000453285 KLHL32Q96NJ5 620 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 GUCD1Q96NT3 240 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 LYSMD1Q96S90 227 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 RBBP8Q99708 897 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 CPNE1Q99829 537 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 HEPHQ9BQS7 1158 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 STMN4Q9H169 189 aaPredicted RBP6.02□□□□□ -1.45
SDC4P-201ENST00000453285 MFSD1Q9H3U5 465 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 TRABDQ9H4I3 376 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 ZDHHC6Q9H6R6 413 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 ATP13A3Q9H7F0 1226 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 BRD9Q9H8M2 597 aa6.02□□□□□ -1.45
SDC4P-201ENST00000453285 MAGEE1Q9HCI5 957 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms