RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 SLC7A14Q8TBB6 771 aa18.74■□□□□ 0.59
PTPA-223ENST00000452489 DYNC2LI1Q8TCX1 351 aa18.74■□□□□ 0.59
PTPA-223ENST00000452489 DCAF4Q8WV16 495 aa18.74■□□□□ 0.59
PTPA-223ENST00000452489 ARNTL2Q8WYA1 636 aa18.74■□□□□ 0.59
PTPA-223ENST00000452489 RNF157Q96PX1 679 aa18.74■□□□□ 0.59
PTPA-223ENST00000452489 CEP41Q9BYV8 373 aa18.74■□□□□ 0.59
PTPA-223ENST00000452489 AQP12BA6NM10 295 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 SSX4O60224 188 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 NRP2O60462 931 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 TSPAN9O75954 239 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 TPSB2P20231 275 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 FMO4P31512 558 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 RFC2P35250 354 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 BCAR1P56945 870 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 CTAG1AP78358 180 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 SUZ12Q15022 739 aaKnown RBP18.73■□□□□ 0.59
PTPA-223ENST00000452489 SNX17Q15036 470 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 TPSAB1Q15661 275 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 UGCGQ16739 394 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 PYCR3Q53H96 274 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 Q5BKY6 102 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 COLEC12Q5KU26 742 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 AQP12AQ8IXF9 295 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 ANKRD52Q8NB46 1076 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 LEMD2Q8NC56 503 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 PHF10Q8WUB8 498 aaKnown RBP18.73■□□□□ 0.59
PTPA-223ENST00000452489 C12orf10Q9HB07 376 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 V9GYQ6 96 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 B8ZZF3 427 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 HADHAP40939 763 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 DMP1Q13316 513 aaPredicted RBP18.73■□□□□ 0.59
PTPA-223ENST00000452489 MEP1AQ16819 746 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 CYP51A1Q16850 503 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 FAM45BPQ6NSW5 357 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 CCNYL1Q8N7R7 359 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 OR5H6Q8NGV6 325 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 FAM45AQ8TCE6 357 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 CHAC2Q8WUX2 184 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 KCTD14Q9BQ13 255 aaPredicted RBP18.73■□□□□ 0.59
PTPA-223ENST00000452489 CCDC90BQ9GZT6 254 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 IL22Q9GZX6 179 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 TASP1Q9H6P5 420 aa18.73■□□□□ 0.59
PTPA-223ENST00000452489 BCLAF3A2AJT9 711 aaKnown RBP18.72■□□□□ 0.59
PTPA-223ENST00000452489 CENPXA8MT69 81 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 SLCO1B7G3V0H7 640 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 H0YAE9 185 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 POLR1CO15160 346 aaPredicted RBP18.72■□□□□ 0.59
PTPA-223ENST00000452489 MTRF1O75570 445 aaKnown RBP18.72■□□□□ 0.59
PTPA-223ENST00000452489 CD4P01730 458 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 M6PRP20645 277 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 AGXTP21549 392 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 EVA1CP58658 441 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 STRA8Q7Z7C7 330 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 OR5B17Q8NGF7 314 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 AGAP2Q99490 1192 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 RBBP8Q99708 897 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 TARS2Q9BW92 718 aaKnown RBP18.72■□□□□ 0.59
PTPA-223ENST00000452489 IDI2Q9BXS1 227 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 NARFLQ9H6Q4 476 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 SRP68Q9UHB9 627 aaKnown RBP18.72■□□□□ 0.59
PTPA-223ENST00000452489 PNMA8BQ9ULN7 279 aaPredicted RBP18.72■□□□□ 0.59
PTPA-223ENST00000452489 LOC102724428A0A0B4J2F2 783 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 PDZK1P1A8MUH7 402 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 PTGES3LE9PB15 166 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 INPP4BO15327 924 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 ENDOD1O94919 500 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 NDST3O95803 873 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 NAGAP17050 411 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 POLR2CP19387 275 aaPredicted RBP18.72■□□□□ 0.59
PTPA-223ENST00000452489 FSHRP23945 695 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 TBXAS1P24557 533 aaPredicted RBP18.72■□□□□ 0.59
PTPA-223ENST00000452489 HK2P52789 917 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 SIK1P57059 783 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 MAPRE2Q15555 327 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 BRMS1LQ5PSV4 323 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 MFSD14BQ5SR56 506 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 ZYG11AQ6WRX3 759 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 GDPD3Q7L5L3 318 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 STRADAQ7RTN6 431 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 THAP5Q7Z6K1 395 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 RETREG3Q86VR2 466 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 ERO1BQ86YB8 467 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 TMEM151AQ8N4L1 468 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 URGCPQ8TCY9 931 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 SLIRPQ9GZT3 109 aaKnown RBP18.72■□□□□ 0.59
PTPA-223ENST00000452489 UBA2Q9UBT2 640 aaPredicted RBP18.72■□□□□ 0.59
PTPA-223ENST00000452489 DAGLAQ9Y4D2 1042 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 PCDHB3Q9Y5E6 796 aa18.72■□□□□ 0.59
PTPA-223ENST00000452489 AP3D1O14617 1153 aa18.71■□□□□ 0.59
PTPA-223ENST00000452489 IL4RP24394 825 aa18.71■□□□□ 0.59
PTPA-223ENST00000452489 RRM2P31350 389 aa18.71■□□□□ 0.59
PTPA-223ENST00000452489 CLDN10P78369 228 aa18.71■□□□□ 0.59
PTPA-223ENST00000452489 BNIP2Q12982 314 aa18.71■□□□□ 0.59
PTPA-223ENST00000452489 RBM48Q5RL73 367 aaKnown RBP18.71■□□□□ 0.59
PTPA-223ENST00000452489 TRAF7Q6Q0C0 670 aa18.71■□□□□ 0.59
PTPA-223ENST00000452489 SMG8Q8ND04 991 aaKnown RBP18.71■□□□□ 0.59
PTPA-223ENST00000452489 SYBUQ9NX95 663 aa18.71■□□□□ 0.59
PTPA-223ENST00000452489 MAGED1Q9Y5V3 778 aaPredicted RBP18.71■□□□□ 0.59
PTPA-223ENST00000452489 SCN4AP35499 1836 aa18.71■□□□□ 0.59
PTPA-223ENST00000452489 C12orf71A8MTZ7 269 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms