RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 C6orf132Q5T0Z8 1188 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 GUSBP11Q6P575 273 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 NYAP1Q6ZVC0 841 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 DPPA4Q7L190 304 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 ATPAF2Q8N5M1 289 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 PLA2G15Q8NCC3 412 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 IFI44Q8TCB0 444 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 DNAJC7Q99615 494 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 IL12RB2Q99665 862 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 APOOQ9BUR5 198 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 SLC13A1Q9BZW2 595 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 EVA1BQ9NVM1 165 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 NCKIPSDQ9NZQ3 722 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 OR1A2Q9Y585 309 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 PCDHB1Q9Y5F3 818 aa12.54□□□□□ -0.4
CPSF4-208ENST00000452047 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.54□□□□□ -0.47e-6■■□□□ 12.1
CPSF4-208ENST00000452047 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.53□□□□□ -0.4
CPSF4-208ENST00000452047 EME2A4GXA9 379 aaPredicted RBP12.53□□□□□ -0.4
CPSF4-208ENST00000452047 TMEM110-MUSTN1A8MSY1 372 aa12.53□□□□□ -0.4
CPSF4-208ENST00000452047 MFSD11O43934 449 aa12.53□□□□□ -0.4
CPSF4-208ENST00000452047 RECQL5O94762 991 aaPredicted RBP12.53□□□□□ -0.4
CPSF4-208ENST00000452047 PCCBP05166 539 aa12.53□□□□□ -0.4
CPSF4-208ENST00000452047 TPM3P06753 285 aa12.53□□□□□ -0.4
CPSF4-208ENST00000452047 CELA2BP08218 269 aaPredicted RBP12.53□□□□□ -0.4
CPSF4-208ENST00000452047 ELFN1P0C7U0 828 aa12.53□□□□□ -0.4
CPSF4-208ENST00000452047 ADKP55263 362 aaKnown RBP12.53□□□□□ -0.4
CPSF4-208ENST00000452047 CDH6P55285 790 aa12.53□□□□□ -0.4
CPSF4-208ENST00000452047 POLR2LP62875 67 aaKnown RBP12.53□□□□□ -0.4
CPSF4-208ENST00000452047 DPYSL3Q14195 570 aa12.53□□□□□ -0.4
CPSF4-208ENST00000452047 SLC18A3Q16572 532 aa12.53□□□□□ -0.4
CPSF4-208ENST00000452047 CDKN3Q16667 212 aa12.53□□□□□ -0.4
CPSF4-208ENST00000452047 COL28A1Q2UY09 1125 aa12.53□□□□□ -0.4
CPSF4-208ENST00000452047 ATP13A4Q4VNC1 1196 aa12.53□□□□□ -0.4
CPSF4-208ENST00000452047 FAXCQ5TGI0 409 aa12.53□□□□□ -0.4
CPSF4-208ENST00000452047 KCTD16Q68DU8 428 aa12.53□□□□□ -0.4
CPSF4-208ENST00000452047 SPECC1LQ69YQ0 1117 aa12.53□□□□□ -0.4
CPSF4-208ENST00000452047 C19orf48Q6RUI8 117 aa12.53□□□□□ -0.4
CPSF4-208ENST00000452047 SLC35F3Q8IY50 421 aa12.53□□□□□ -0.4
CPSF4-208ENST00000452047 NUDCD1Q96RS6 583 aa12.53□□□□□ -0.4
CPSF4-208ENST00000452047 PACSIN1Q9BY11 444 aa12.53□□□□□ -0.4
CPSF4-208ENST00000452047 NOD2Q9HC29 1040 aa12.53□□□□□ -0.4
CPSF4-208ENST00000452047 UVRAGQ9P2Y5 699 aa12.53□□□□□ -0.4
CPSF4-208ENST00000452047 B4GALT6Q9UBX8 382 aa12.53□□□□□ -0.4
CPSF4-208ENST00000452047 PCDHGC4Q9Y5F7 938 aa12.53□□□□□ -0.4
CPSF4-208ENST00000452047 YY2O15391 372 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 TLX3O43711 291 aaPredicted RBP12.52□□□□□ -0.41
CPSF4-208ENST00000452047 PROSCO94903 275 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 ANXA6P08133 673 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 TGM2P21980 687 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 HTR1BP28222 390 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 MMP13P45452 471 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 BLKP51451 505 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 TAS2R40P59535 323 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 KIAA1024LP59773 190 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 MAXP61244 160 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 GALNT2Q10471 571 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 TRAF2Q12933 501 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 TRIM14Q14142 442 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 KRT81Q14533 505 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 PAFAH1B3Q15102 231 aaKnown RBP12.52□□□□□ -0.41
CPSF4-208ENST00000452047 NR0B2Q15466 257 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 HADHQ16836 314 aaKnown RBP12.52□□□□□ -0.41
CPSF4-208ENST00000452047 SKOR2Q2VWA4 1001 aaPredicted RBP12.52□□□□□ -0.41
CPSF4-208ENST00000452047 RALGPS1Q5JS13 557 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 NCBP2-AS2Q69YL0 99 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 ENPP7Q6UWV6 458 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 EFL1Q7Z2Z2 1120 aaKnown RBP12.52□□□□□ -0.41
CPSF4-208ENST00000452047 LRRC49Q8IUZ0 686 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 HID1Q8IV36 788 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 PELI3Q8N2H9 469 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 FSTL5Q8N475 847 aaPredicted RBP12.52□□□□□ -0.41
CPSF4-208ENST00000452047 TEX26Q8N6G2 289 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 PCDH19Q8TAB3 1148 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 MAPK15Q8TD08 544 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 TSACCQ96A04 125 aaPredicted RBP12.52□□□□□ -0.41
CPSF4-208ENST00000452047 FUBP1Q96AE4 644 aaKnown RBP12.52□□□□□ -0.41
CPSF4-208ENST00000452047 PDXPQ96GD0 296 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 COQ10AQ96MF6 247 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 WDR92Q96MX6 357 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 ZNF670Q9BS34 389 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 CTTNBP2NLQ9P2B4 639 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 AK5Q9Y6K8 562 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 MGAQ8IWI9 3026 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 ATMQ13315 3056 aa12.52□□□□□ -0.41
CPSF4-208ENST00000452047 A0A1W2PQ67 120 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 SSU72P8A0A1W2PR75 194 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 CPED1A4D0V7 1026 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 TMEM202A6NGA9 273 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 A8MX80 341 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 BRINP1O60477 761 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 RASGRP1O95267 797 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 CPP00450 1065 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 HOXC4P09017 264 aaPredicted RBP12.51□□□□□ -0.41
CPSF4-208ENST00000452047 H2AFZP0C0S5 128 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 LHCGRP22888 699 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 MAN1A1P33908 653 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 TRIM23P36406 574 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 GARSP41250 739 aaKnown RBP12.51□□□□□ -0.41
CPSF4-208ENST00000452047 SSR1P43307 286 aaKnown RBP12.51□□□□□ -0.41
CPSF4-208ENST00000452047 SRP54P61011 504 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms