RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 PAFAH1B3Q15102 231 aaKnown RBP16.12■□□□□ 0.17
SGCE-208ENST00000450385 WSCD2Q2TBF2 565 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 CCDC157Q569K6 752 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 FAXCQ5TGI0 409 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 LIPIQ6XZB0 460 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 DPPA4Q7L190 304 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 PAF1Q8N7H5 531 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 KCTD6Q8NC69 237 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 OR6C4Q8NGE1 309 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 NAT6Q93015 286 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 APOOQ9BUR5 198 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 BOCQ9BWV1 1114 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 TSPY26PQ9H489 355 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 CTTNBP2NLQ9P2B4 639 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 APOBEC3BQ9UH17 382 aaKnown RBP16.12■□□□□ 0.17
SGCE-208ENST00000450385 INTUQ9ULD6 942 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 PPIL1Q9Y3C6 166 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 DGKBQ9Y6T7 804 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 ASXL3Q9C0F0 2248 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 EME2A4GXA9 379 aaPredicted RBP16.11■□□□□ 0.17
SGCE-208ENST00000450385 FFAR2O15552 330 aa16.11■□□□□ 0.17
SGCE-208ENST00000450385 AKR1B10O60218 316 aa16.11■□□□□ 0.17
SGCE-208ENST00000450385 RASGRP1O95267 797 aa16.11■□□□□ 0.17
SGCE-208ENST00000450385 MMP13P45452 471 aa16.11■□□□□ 0.17
SGCE-208ENST00000450385 RGRP47804 291 aa16.11■□□□□ 0.17
SGCE-208ENST00000450385 HK3P52790 923 aa16.11■□□□□ 0.17
SGCE-208ENST00000450385 INSM1Q01101 510 aaPredicted RBP16.11■□□□□ 0.17
SGCE-208ENST00000450385 TARDBPQ13148 414 aaKnown RBP eCLIP16.11■□□□□ 0.17
SGCE-208ENST00000450385 INPP5AQ14642 412 aa16.11■□□□□ 0.17
SGCE-208ENST00000450385 NFATC4Q14934 902 aa16.11■□□□□ 0.17
SGCE-208ENST00000450385 IRF4Q15306 451 aa16.11■□□□□ 0.17
SGCE-208ENST00000450385 IFI16Q16666 785 aaKnown RBP16.11■□□□□ 0.17
SGCE-208ENST00000450385 ARHGAP36Q6ZRI8 547 aa16.11■□□□□ 0.17
SGCE-208ENST00000450385 CNGA4Q8IV77 575 aa16.11■□□□□ 0.17
SGCE-208ENST00000450385 VSTM4Q8IW00 320 aa16.11■□□□□ 0.17
SGCE-208ENST00000450385 RHOT2Q8IXI1 618 aa16.11■□□□□ 0.17
SGCE-208ENST00000450385 PHACTR4Q8IZ21 702 aa16.11■□□□□ 0.17
SGCE-208ENST00000450385 CCDC42Q96M95 316 aa16.11■□□□□ 0.17
SGCE-208ENST00000450385 ABCG4Q9H172 646 aa16.11■□□□□ 0.17
SGCE-208ENST00000450385 MBNL1Q9NR56 388 aaKnown RBP16.11■□□□□ 0.17
SGCE-208ENST00000450385 ETNK2Q9NVF9 386 aa16.11■□□□□ 0.17
SGCE-208ENST00000450385 KLF15Q9UIH9 416 aa16.11■□□□□ 0.17
SGCE-208ENST00000450385 DNPEPQ9ULA0 475 aa16.11■□□□□ 0.17
SGCE-208ENST00000450385 OPA1O60313 960 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 TCEA3O75764 348 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 MT-CO3P00414 261 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 ANXA6P08133 673 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 CYP2A6P11509 494 aaPredicted RBP16.1■□□□□ 0.17
SGCE-208ENST00000450385 TCF4P15884 667 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 ITIH2P19823 946 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 CA4P22748 312 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 TEAD1P28347 426 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 GARSP41250 739 aaKnown RBP16.1■□□□□ 0.17
SGCE-208ENST00000450385 SSR1P43307 286 aaKnown RBP16.1■□□□□ 0.17
SGCE-208ENST00000450385 KIAA1024LP59773 190 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 CYP4F3Q08477 520 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 GALNT2Q10471 571 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 DPYSL3Q14195 570 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 TCEAL1Q15170 157 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 NR0B2Q15466 257 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 ANKRD20A8PQ5CZ79 823 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 ZNF542PQ5EBM4 170 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 PRRT3Q5FWE3 981 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 C6orf132Q5T0Z8 1188 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 CDCP2Q5VXM1 449 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 ALG1LQ6GMV1 187 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 ESRP1Q6NXG1 681 aaKnown RBP16.1■□□□□ 0.17
SGCE-208ENST00000450385 NLRP8Q86W28 1048 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 GKN2Q86XP6 184 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 LSMEM2Q8N112 164 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 CBARPQ8N350 705 aaPredicted RBP16.1■□□□□ 0.17
SGCE-208ENST00000450385 NETO2Q8NC67 525 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 LMX1AQ8TE12 382 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 FAF2Q96CS3 445 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 SCRN2Q96FV2 425 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 BTBD6Q96KE9 485 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 WDR92Q96MX6 357 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 DEPDC7Q96QD5 511 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 ABHD10Q9NUJ1 306 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 CELSR3Q9NYQ7 3312 aa16.1■□□□□ 0.17
SGCE-208ENST00000450385 RP1P56715 2156 aa16.09■□□□□ 0.17
SGCE-208ENST00000450385 A0A087WV48 116 aa16.09■□□□□ 0.17
SGCE-208ENST00000450385 FAM149AA5PLN7 773 aa16.09■□□□□ 0.17
SGCE-208ENST00000450385 CACNB4O00305 520 aaPredicted RBP16.09■□□□□ 0.17
SGCE-208ENST00000450385 MUSKO15146 869 aa16.09■□□□□ 0.17
SGCE-208ENST00000450385 MATN3O15232 486 aa16.09■□□□□ 0.17
SGCE-208ENST00000450385 RECQL5O94762 991 aaPredicted RBP16.09■□□□□ 0.17
SGCE-208ENST00000450385 MTA2O94776 668 aa16.09■□□□□ 0.17
SGCE-208ENST00000450385 TNFP01375 233 aa16.09■□□□□ 0.17
SGCE-208ENST00000450385 CTSEP14091 401 aa16.09■□□□□ 0.17
SGCE-208ENST00000450385 RPL26P61254 145 aaKnown RBP16.09■□□□□ 0.17
SGCE-208ENST00000450385 PEX6Q13608 980 aa16.09■□□□□ 0.17
SGCE-208ENST00000450385 LRRC73Q5JTD7 316 aa16.09■□□□□ 0.17
SGCE-208ENST00000450385 LRRC38Q5VT99 294 aa16.09■□□□□ 0.17
SGCE-208ENST00000450385 TXNRD3NBQ6F5E7 133 aa16.09■□□□□ 0.17
SGCE-208ENST00000450385 ZSWIM9Q86XI8 627 aa16.09■□□□□ 0.17
SGCE-208ENST00000450385 MDM1Q8TC05 714 aa16.09■□□□□ 0.17
SGCE-208ENST00000450385 MAML1Q92585 1016 aa16.09■□□□□ 0.17
SGCE-208ENST00000450385 POLR1EQ9GZS1 481 aaKnown RBP16.09■□□□□ 0.17
SGCE-208ENST00000450385 NOD2Q9HC29 1040 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms