RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 LRRC34Q8IZ02 419 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 PCDH20Q8N6Y1 951 aaKnown RBP14.32□□□□□ -0.12
USP39-207ENST00000450066 NAT16Q8N8M0 369 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 MDGA1Q8NFP4 955 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 OR6K2Q8NGY2 324 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 ZNF473Q8WTR7 871 aaKnown RBP14.32□□□□□ -0.12
USP39-207ENST00000450066 DNAJC1Q96KC8 554 aaKnown RBP14.32□□□□□ -0.12
USP39-207ENST00000450066 CABS1Q96KC9 395 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 TNKS2Q9H2K2 1166 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 NLE1Q9NVX2 485 aaPredicted RBP14.32□□□□□ -0.12
USP39-207ENST00000450066 DCDC2Q9UHG0 476 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 AURKAO14965 403 aa14.31□□□□□ -0.12
USP39-207ENST00000450066 GSRP00390 522 aa14.31□□□□□ -0.12
USP39-207ENST00000450066 MPOP05164 745 aa14.31□□□□□ -0.12
USP39-207ENST00000450066 SLC8A1P32418 973 aa14.31□□□□□ -0.12
USP39-207ENST00000450066 ABCG1P45844 678 aa14.31□□□□□ -0.12
USP39-207ENST00000450066 LEPRP48357 1165 aaKnown RBP14.31□□□□□ -0.12
USP39-207ENST00000450066 MPP1Q00013 466 aa14.31□□□□□ -0.12
USP39-207ENST00000450066 GRM3Q14832 879 aa14.31□□□□□ -0.12
USP39-207ENST00000450066 INSCQ1MX18 579 aa14.31□□□□□ -0.12
USP39-207ENST00000450066 MBLAC2Q68D91 279 aa14.31□□□□□ -0.12
USP39-207ENST00000450066 TRIM68Q6AZZ1 485 aa14.31□□□□□ -0.12
USP39-207ENST00000450066 C22orf39Q6P5X5 142 aa14.31□□□□□ -0.12
USP39-207ENST00000450066 CILP2Q8IUL8 1156 aa14.31□□□□□ -0.12
USP39-207ENST00000450066 OR13C4Q8NGS5 318 aa14.31□□□□□ -0.12
USP39-207ENST00000450066 ASIC4Q96FT7 647 aa14.31□□□□□ -0.12
USP39-207ENST00000450066 MYO19Q96H55 970 aa14.31□□□□□ -0.12
USP39-207ENST00000450066 TBATAQ96M53 351 aa14.31□□□□□ -0.12
USP39-207ENST00000450066 CDH22Q9UJ99 828 aa14.31□□□□□ -0.12
USP39-207ENST00000450066 ANKRD36A6QL64 1941 aa14.31□□□□□ -0.12
USP39-207ENST00000450066 HEPACAM2A8MVW5 462 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 CCL22O00626 93 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 BUD23O43709 281 aaKnown RBP14.3□□□□□ -0.12
USP39-207ENST00000450066 GLRA3O75311 464 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 NFATC1O95644 943 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 CISD3P0C7P0 127 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 POLR2EP19388 210 aaKnown RBP14.3□□□□□ -0.12
USP39-207ENST00000450066 TAC1P20366 129 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 LPOP22079 712 aaPredicted RBP14.3□□□□□ -0.12
USP39-207ENST00000450066 ABL2P42684 1182 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 CD151P48509 253 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 CSRP3P50461 194 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 EPHB1P54762 984 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 ZSCAN26Q16670 478 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 MYLK3Q32MK0 819 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 TMEM215Q68D42 235 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 KYAT3Q6YP21 454 aaKnown RBP14.3□□□□□ -0.12
USP39-207ENST00000450066 PTAR1Q7Z6K3 402 aaPredicted RBP14.3□□□□□ -0.12
USP39-207ENST00000450066 CMC1Q7Z7K0 106 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 GPR150Q8NGU9 434 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 PIH1D2Q8WWB5 315 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 TUBGCP5Q96RT8 1024 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 MAGEE1Q9HCI5 957 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 THG1LQ9NWX6 298 aaKnown RBP14.3□□□□□ -0.12
USP39-207ENST00000450066 SLCO3A1Q9UIG8 710 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 CDH7Q9ULB5 785 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 XIRP2A4UGR9 3374 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 CCDC162PA2VCL2 907 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 TRIM24O15164 1050 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 HAUS5O94927 633 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 FCARP24071 287 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 SERPINA4P29622 427 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 DGKGP49619 791 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 TMPRSS15P98073 1019 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 ILF2Q12905 390 aaKnown RBP14.3□□□□□ -0.12
USP39-207ENST00000450066 ADAM15Q13444 863 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 PTPRCAPQ14761 206 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 DLG2Q15700 870 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 GEN1Q17RS7 908 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 ACCSLQ4AC99 568 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 PPM1JQ5JR12 505 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 PLPP6Q8IY26 295 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 RYBPQ8N488 228 aaPredicted RBP14.3□□□□□ -0.12
USP39-207ENST00000450066 ACVR1CQ8NER5 493 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 LRRC8CQ8TDW0 803 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 CDKN2AIPNLQ96HQ2 116 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 SMIM14Q96QK8 99 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 FAM83CQ9BQN1 747 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 CPEB1Q9BZB8 566 aaKnown RBP14.3□□□□□ -0.12
USP39-207ENST00000450066 NSRP1Q9H0G5 558 aaKnown RBP14.3□□□□□ -0.12
USP39-207ENST00000450066 SUDS3Q9H7L9 328 aaPredicted RBP14.3□□□□□ -0.12
USP39-207ENST00000450066 CAB39LQ9H9S4 337 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 SLC39A10Q9ULF5 831 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 ERVW-1Q9UQF0 538 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 SLC27A6Q9Y2P4 619 aa14.3□□□□□ -0.12
USP39-207ENST00000450066 ERICH4A6NGS2 130 aa14.29□□□□□ -0.12
USP39-207ENST00000450066 PIGNO95427 931 aa14.29□□□□□ -0.12
USP39-207ENST00000450066 GOT2P00505 430 aaKnown RBP14.29□□□□□ -0.12
USP39-207ENST00000450066 GSTA1P08263 222 aa14.29□□□□□ -0.12
USP39-207ENST00000450066 SERPINB4P48594 390 aa14.29□□□□□ -0.12
USP39-207ENST00000450066 VASPP50552 380 aaPredicted RBP14.29□□□□□ -0.12
USP39-207ENST00000450066 PDGFRLQ15198 375 aa14.29□□□□□ -0.12
USP39-207ENST00000450066 CARD16Q5EG05 197 aa14.29□□□□□ -0.12
USP39-207ENST00000450066 ATAT1Q5SQI0 421 aa14.29□□□□□ -0.12
USP39-207ENST00000450066 MRNIPQ6NTE8 343 aa14.29□□□□□ -0.12
USP39-207ENST00000450066 OTUD6BQ8N6M0 293 aa14.29□□□□□ -0.12
USP39-207ENST00000450066 OR4K2Q8NGD2 314 aa14.29□□□□□ -0.12
USP39-207ENST00000450066 OR4L1Q8NH43 312 aa14.29□□□□□ -0.12
USP39-207ENST00000450066 WFIKKN2Q8TEU8 576 aa14.29□□□□□ -0.12
USP39-207ENST00000450066 E2F7Q96AV8 911 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms