RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 PABPC3Q9H361 631 aaKnown RBP12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 C3orf14Q9HBI5 128 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 BTRCQ9Y297 605 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 UBIAD1Q9Y5Z9 338 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 ECDO95905 644 aaPredicted RBP12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 NEK3P51956 506 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 RPL38P63173 70 aaKnown RBP12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 RASA2Q15283 850 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 TTI2Q6NXR4 508 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 DEF8Q6ZN54 512 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 PEX5LQ8IYB4 626 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 UBR7Q8N806 425 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 OR4L1Q8NH43 312 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 MAGEB18Q96M61 343 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 PNO1Q9NRX1 252 aaKnown RBP12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 C2CD2Q9Y426 696 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 NOX1Q9Y5S8 564 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 GLYATL1P3A0A0U1RQE8 302 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 OR2AG2A6NM03 316 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 ATP9AO75110 1047 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 CLDN11O75508 207 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 TPP2P29144 1249 aaPredicted RBP12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 PBX3P40426 434 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 SLC5A3P53794 718 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 SLC13A2Q13183 592 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 GRM2Q14416 872 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 HSDL1Q3SXM5 330 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 RASSF6Q6ZTQ3 369 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 SPATA6LQ8N4H0 392 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 FBXO30Q8TB52 745 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 ITFG1Q8TB96 612 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 KAT5Q92993 513 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 VWDEQ8N2E2 1590 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 CYP3A4P08684 503 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 KCNA5P22460 613 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 TM4SF1P30408 202 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 PRMT9Q6P2P2 845 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 ZCCHC23Q6ZST2 131 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 PTGR2Q8N8N7 351 aaPredicted RBP12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 DNASE1L2Q92874 299 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 NMUR1Q9HB89 426 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 TMCO1Q9UM00 188 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 PEX12O00623 359 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 ZNF132P52740 706 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 HNRNPH2P55795 449 aaKnown RBP12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 ILF2Q12905 390 aaKnown RBP12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 TMEM119Q4V9L6 283 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 B3GALT6Q96L58 329 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 PTPN18Q99952 460 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 KLC4Q9NSK0 619 aa12.78□□□□□ -0.36
AC006001.3-201ENST00000449307 TM7SF2O76062 418 aa12.77□□□□□ -0.36
AC006001.3-201ENST00000449307 KRT75O95678 551 aa12.77□□□□□ -0.36
AC006001.3-201ENST00000449307 HGFP14210 728 aa12.77□□□□□ -0.36
AC006001.3-201ENST00000449307 RAB14P61106 215 aa12.77□□□□□ -0.36
AC006001.3-201ENST00000449307 DPYSL3Q14195 570 aa12.77□□□□□ -0.36
AC006001.3-201ENST00000449307 INTS11Q5TA45 600 aaKnown RBP12.77□□□□□ -0.36
AC006001.3-201ENST00000449307 GPER1Q99527 375 aa12.77□□□□□ -0.36
AC006001.3-201ENST00000449307 UGT2B28Q9BY64 529 aa12.77□□□□□ -0.36
AC006001.3-201ENST00000449307 REEP1Q9H902 201 aa12.77□□□□□ -0.36
AC006001.3-201ENST00000449307 NECTIN3Q9NQS3 549 aa12.77□□□□□ -0.36
AC006001.3-201ENST00000449307 FBXW2Q9UKT8 454 aa12.77□□□□□ -0.36
AC006001.3-201ENST00000449307 ASTN2O75129 1339 aaPredicted RBP12.77□□□□□ -0.36
AC006001.3-201ENST00000449307 SIGLEC16A6NMB1 481 aa12.77□□□□□ -0.36
AC006001.3-201ENST00000449307 IQCF5A8MTL0 148 aa12.77□□□□□ -0.36
AC006001.3-201ENST00000449307 PEX11AO75192 247 aa12.77□□□□□ -0.36
AC006001.3-201ENST00000449307 C4BPBP20851 252 aa12.77□□□□□ -0.36
AC006001.3-201ENST00000449307 SCUBE1Q8IWY4 988 aa12.77□□□□□ -0.36
AC006001.3-201ENST00000449307 CADM2Q8N3J6 435 aa12.77□□□□□ -0.36
AC006001.3-201ENST00000449307 CAPSLQ8WWF8 208 aa12.77□□□□□ -0.36
AC006001.3-201ENST00000449307 SLC9A6Q92581 669 aa12.77□□□□□ -0.36
AC006001.3-201ENST00000449307 VCPIP1Q96JH7 1222 aa12.77□□□□□ -0.36
AC006001.3-201ENST00000449307 MARK1Q9P0L2 795 aa12.77□□□□□ -0.36
AC006001.3-201ENST00000449307 TMEM216Q9P0N5 145 aa12.77□□□□□ -0.36
AC006001.3-201ENST00000449307 FCF1Q9Y324 198 aaKnown RBP12.77□□□□□ -0.36
AC006001.3-201ENST00000449307 KLRG2A4D1S0 409 aaPredicted RBP12.77□□□□□ -0.37
AC006001.3-201ENST00000449307 CAPN13Q6MZZ7 669 aaPredicted RBP12.77□□□□□ -0.37
AC006001.3-201ENST00000449307 HEXDCQ8WVB3 486 aa12.77□□□□□ -0.37
AC006001.3-201ENST00000449307 BTN2A3PQ96KV6 586 aa12.77□□□□□ -0.37
AC006001.3-201ENST00000449307 FNDC11Q9BVV2 318 aa12.77□□□□□ -0.37
AC006001.3-201ENST00000449307 SLC35C2Q9NQQ7 365 aa12.77□□□□□ -0.37
AC006001.3-201ENST00000449307 PCDHB3Q9Y5E6 796 aa12.77□□□□□ -0.37
AC006001.3-201ENST00000449307 KIF20BQ96Q89 1820 aa12.77□□□□□ -0.37
AC006001.3-201ENST00000449307 TNFP01375 233 aa12.77□□□□□ -0.37
AC006001.3-201ENST00000449307 RPP38P78345 283 aaKnown RBP12.77□□□□□ -0.37
AC006001.3-201ENST00000449307 TCHHL1Q5QJ38 904 aaPredicted RBP12.77□□□□□ -0.37
AC006001.3-201ENST00000449307 PDZK1Q5T2W1 519 aa12.77□□□□□ -0.37
AC006001.3-201ENST00000449307 EEF1DP3Q658K8 133 aa12.77□□□□□ -0.37
AC006001.3-201ENST00000449307 GPR141Q7Z602 305 aa12.77□□□□□ -0.37
AC006001.3-201ENST00000449307 LMX1AQ8TE12 382 aa12.77□□□□□ -0.37
AC006001.3-201ENST00000449307 BCO2Q9BYV7 579 aa12.77□□□□□ -0.37
AC006001.3-201ENST00000449307 KERAO60938 352 aa12.77□□□□□ -0.37
AC006001.3-201ENST00000449307 ADRB2P07550 413 aa12.77□□□□□ -0.37
AC006001.3-201ENST00000449307 CSTF2P33240 577 aaKnown RBP eCLIP12.77□□□□□ -0.37
AC006001.3-201ENST00000449307 ACLYP53396 1101 aa12.77□□□□□ -0.37
AC006001.3-201ENST00000449307 LSM12Q3MHD2 195 aaKnown RBP12.77□□□□□ -0.37
AC006001.3-201ENST00000449307 VARS2Q5ST30 1063 aaKnown RBP12.77□□□□□ -0.37
AC006001.3-201ENST00000449307 TRIQKQ629K1 86 aa12.77□□□□□ -0.37
AC006001.3-201ENST00000449307 DUPD1Q68J44 220 aa12.77□□□□□ -0.37
AC006001.3-201ENST00000449307 PMF1Q6P1K2 205 aa12.77□□□□□ -0.37
AC006001.3-201ENST00000449307 JAZF1Q86VZ6 243 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms