RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 BRSK1Q8TDC3 778 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 PTCD2Q8WV60 388 aaKnown RBP14.11□□□□□ -0.15
SHMT2-203ENST00000449049 HNRNPLLQ8WVV9 542 aaKnown RBP14.11□□□□□ -0.15
SHMT2-203ENST00000449049 SCRN2Q96FV2 425 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 SMIM14Q96QK8 99 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 SRPK1Q96SB4 655 aaKnown RBP14.11□□□□□ -0.15
SHMT2-203ENST00000449049 EBNA1BP2Q99848 306 aaKnown RBP14.11□□□□□ -0.15
SHMT2-203ENST00000449049 POLR3BQ9NW08 1133 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-203ENST00000449049 HACD3Q9P035 362 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 SOX13Q9UN79 622 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 SIT1Q9Y3P8 196 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 TCAF1Q9Y4C2 921 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 STK25O00506 426 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 MID1O15344 667 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 ALPIP09923 528 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 PIRTP0C851 137 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 H2AFXP16104 143 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-203ENST00000449049 ADRA1DP25100 572 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 DRD3P35462 400 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 HNF1BP35680 557 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 SUOXP51687 545 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 DGKEP52429 567 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 ZBTB16Q05516 673 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 USP45Q70EL2 814 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 ANKMY2Q8IV38 441 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 AADATQ8N5Z0 425 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 FBXO36Q8NEA4 188 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 BLOC1S5Q8TDH9 187 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 FAM131CQ96AQ9 280 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 STAMBPL1Q96FJ0 436 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 IER2Q9BTL4 223 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 KIFC1Q9BW19 673 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 PABPC3Q9H361 631 aaKnown RBP14.11□□□□□ -0.15
SHMT2-203ENST00000449049 TRABDQ9H4I3 376 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 MRM3Q9HC36 420 aaKnown RBP14.11□□□□□ -0.15
SHMT2-203ENST00000449049 POLMQ9NP87 494 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-203ENST00000449049 DYRK4Q9NR20 520 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 SCML1Q9UN30 329 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 CHMP2BQ9UQN3 213 aa14.11□□□□□ -0.15
SHMT2-203ENST00000449049 F5P12259 2224 aa14.1□□□□□ -0.15
SHMT2-203ENST00000449049 TCRBV21S2A2A0A5A6 115 aa14.1□□□□□ -0.15
SHMT2-203ENST00000449049 MAGEB16A2A368 324 aa14.1□□□□□ -0.15
SHMT2-203ENST00000449049 HEATR9A2RTY3 570 aa14.1□□□□□ -0.15
SHMT2-203ENST00000449049 NPIPB15A6NHN6 443 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-203ENST00000449049 ADRB3P13945 408 aa14.1□□□□□ -0.15
SHMT2-203ENST00000449049 NFKBIAP25963 317 aa14.1□□□□□ -0.15
SHMT2-203ENST00000449049 NEK3P51956 506 aa14.1□□□□□ -0.15
SHMT2-203ENST00000449049 PTPRRQ15256 657 aa14.1□□□□□ -0.15
SHMT2-203ENST00000449049 CDKN3Q16667 212 aa14.1□□□□□ -0.15
SHMT2-203ENST00000449049 HP1BP3Q5SSJ5 553 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-203ENST00000449049 DENND2CQ68D51 928 aa14.1□□□□□ -0.15
SHMT2-203ENST00000449049 ERN2Q76MJ5 926 aaKnown RBP14.1□□□□□ -0.15
SHMT2-203ENST00000449049 TTC7BQ86TV6 843 aa14.1□□□□□ -0.15
SHMT2-203ENST00000449049 CCNJLQ8IV13 435 aa14.1□□□□□ -0.15
SHMT2-203ENST00000449049 SPEM1Q8N4L4 309 aa14.1□□□□□ -0.15
SHMT2-203ENST00000449049 PPHLN1Q8NEY8 458 aaKnown RBP14.1□□□□□ -0.15
SHMT2-203ENST00000449049 MDGA1Q8NFP4 955 aa14.1□□□□□ -0.15
SHMT2-203ENST00000449049 PYROXD1Q8WU10 500 aa14.1□□□□□ -0.15
SHMT2-203ENST00000449049 MRGPRX1Q96LB2 322 aa14.1□□□□□ -0.15
SHMT2-203ENST00000449049 NAT9Q9BTE0 207 aa14.1□□□□□ -0.15
SHMT2-203ENST00000449049 SLC6A17Q9H1V8 727 aa14.1□□□□□ -0.15
SHMT2-203ENST00000449049 CDC42EP4Q9H3Q1 356 aaKnown RBP14.1□□□□□ -0.15
SHMT2-203ENST00000449049 MFSD1Q9H3U5 465 aa14.1□□□□□ -0.15
SHMT2-203ENST00000449049 PCDH12Q9NPG4 1184 aa14.1□□□□□ -0.15
SHMT2-203ENST00000449049 C2orf42Q9NWW7 574 aa14.1□□□□□ -0.15
SHMT2-203ENST00000449049 SAMD15Q9P1V8 674 aa14.1□□□□□ -0.15
SHMT2-203ENST00000449049 ZNF711Q9Y462 761 aa14.1□□□□□ -0.15
SHMT2-203ENST00000449049 MAD1L1Q9Y6D9 718 aa14.1□□□□□ -0.15
SHMT2-203ENST00000449049 MROH6A6NGR9 719 aa14.09□□□□□ -0.15
SHMT2-203ENST00000449049 LDB2O43679 373 aa14.09□□□□□ -0.15
SHMT2-203ENST00000449049 GABRG2P18507 467 aa14.09□□□□□ -0.15
SHMT2-203ENST00000449049 PGAM1P18669 254 aa14.09□□□□□ -0.15
SHMT2-203ENST00000449049 NDUFV2P19404 249 aa14.09□□□□□ -0.15
SHMT2-203ENST00000449049 P2RY2P41231 377 aa14.09□□□□□ -0.15
SHMT2-203ENST00000449049 ABL2P42684 1182 aa14.09□□□□□ -0.15
SHMT2-203ENST00000449049 MAGEA9P43362 315 aa14.09□□□□□ -0.15
SHMT2-203ENST00000449049 PMS2P54278 862 aa14.09□□□□□ -0.15
SHMT2-203ENST00000449049 CNTN1Q12860 1018 aa14.09□□□□□ -0.15
SHMT2-203ENST00000449049 LAMB3Q13751 1172 aa14.09□□□□□ -0.15
SHMT2-203ENST00000449049 TAF1AQ15573 450 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-203ENST00000449049 LRRC73Q5JTD7 316 aa14.09□□□□□ -0.15
SHMT2-203ENST00000449049 PIP5KL1Q5T9C9 394 aa14.09□□□□□ -0.15
SHMT2-203ENST00000449049 FBXL19Q6PCT2 694 aa14.09□□□□□ -0.15
SHMT2-203ENST00000449049 GLT6D1Q7Z4J2 308 aa14.09□□□□□ -0.15
SHMT2-203ENST00000449049 CACUL1Q86Y37 369 aa14.09□□□□□ -0.15
SHMT2-203ENST00000449049 TTC30BQ8N4P2 665 aa14.09□□□□□ -0.15
SHMT2-203ENST00000449049 FLCNQ8NFG4 579 aa14.09□□□□□ -0.15
SHMT2-203ENST00000449049 SIPA1Q96FS4 1042 aa14.09□□□□□ -0.15
SHMT2-203ENST00000449049 C9orf72Q96LT7 481 aa14.09□□□□□ -0.15
SHMT2-203ENST00000449049 CHRAC1Q9NRG0 131 aa14.09□□□□□ -0.15
SHMT2-203ENST00000449049 ARGLU1Q9NWB6 273 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-203ENST00000449049 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.09□□□□□ -0.155e-12■■□□□ 11.4
SHMT2-203ENST00000449049 B4GALT6Q9UBX8 382 aa14.09□□□□□ -0.15
SHMT2-203ENST00000449049 FAM237BA0A1B0GVD1 139 aa14.09□□□□□ -0.15
SHMT2-203ENST00000449049 PLK4O00444 970 aa14.09□□□□□ -0.15
SHMT2-203ENST00000449049 AREL1O15033 823 aa14.09□□□□□ -0.15
SHMT2-203ENST00000449049 SPINT1O43278 529 aa14.09□□□□□ -0.15
SHMT2-203ENST00000449049 CRTAMO95727 393 aa14.09□□□□□ -0.15
SHMT2-203ENST00000449049 PDGFBP01127 241 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-203ENST00000449049 DNTTP04053 509 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms