RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 KRT35Q92764 455 aa14.68□□□□□ -0.06
USP39-206ENST00000448971 NUDCD1Q96RS6 583 aa14.68□□□□□ -0.06
USP39-206ENST00000448971 WRAP53Q9BUR4 548 aaKnown RBP14.68□□□□□ -0.06
USP39-206ENST00000448971 POLR1EQ9GZS1 481 aaKnown RBP14.68□□□□□ -0.06
USP39-206ENST00000448971 TRIM10Q9UDY6 481 aa14.68□□□□□ -0.06
USP39-206ENST00000448971 CA5BQ9Y2D0 317 aa14.68□□□□□ -0.06
USP39-206ENST00000448971 MGAQ8IWI9 3026 aa14.68□□□□□ -0.06
USP39-206ENST00000448971 GRID2IPA4D2P6 1211 aa14.67□□□□□ -0.06
USP39-206ENST00000448971 WNT9AO14904 365 aa14.67□□□□□ -0.06
USP39-206ENST00000448971 MATN3O15232 486 aa14.67□□□□□ -0.06
USP39-206ENST00000448971 ARHGAP6O43182 974 aa14.67□□□□□ -0.06
USP39-206ENST00000448971 SPINT1O43278 529 aa14.67□□□□□ -0.06
USP39-206ENST00000448971 MAGEC1O60732 1142 aa14.67□□□□□ -0.06
USP39-206ENST00000448971 ZRANB2O95218 330 aaKnown RBP eCLIP14.67□□□□□ -0.06
USP39-206ENST00000448971 CPP00450 1065 aa14.67□□□□□ -0.06
USP39-206ENST00000448971 WNT1P04628 370 aa14.67□□□□□ -0.06
USP39-206ENST00000448971 KRT10P13645 584 aa14.67□□□□□ -0.06
USP39-206ENST00000448971 CCNCP24863 283 aa14.67□□□□□ -0.06
USP39-206ENST00000448971 CDKN2BP42772 138 aa14.67□□□□□ -0.06
USP39-206ENST00000448971 CCT8P50990 548 aa14.67□□□□□ -0.06
USP39-206ENST00000448971 SUOXP51687 545 aa14.67□□□□□ -0.06
USP39-206ENST00000448971 AP1B1Q10567 949 aa14.67□□□□□ -0.06
USP39-206ENST00000448971 SLC10A2Q12908 348 aaPredicted RBP14.67□□□□□ -0.06
USP39-206ENST00000448971 SGCGQ13326 291 aa14.67□□□□□ -0.06
USP39-206ENST00000448971 UGP2Q16851 508 aa14.67□□□□□ -0.06
USP39-206ENST00000448971 TFDP3Q5H9I0 405 aa14.67□□□□□ -0.06
USP39-206ENST00000448971 DHRS13Q6UX07 377 aa14.67□□□□□ -0.06
USP39-206ENST00000448971 NPNTQ6UXI9 565 aa14.67□□□□□ -0.06
USP39-206ENST00000448971 PTAR1Q7Z6K3 402 aaPredicted RBP14.67□□□□□ -0.06
USP39-206ENST00000448971 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.67□□□□□ -0.06
USP39-206ENST00000448971 KIAA1524Q8TCG1 905 aa14.67□□□□□ -0.06
USP39-206ENST00000448971 HCAR2Q8TDS4 363 aa14.67□□□□□ -0.06
USP39-206ENST00000448971 LGMNQ99538 433 aa14.67□□□□□ -0.06
USP39-206ENST00000448971 GDF3Q9NR23 364 aa14.67□□□□□ -0.06
USP39-206ENST00000448971 ASH1LQ9NR48 2969 aaKnown RBP14.67□□□□□ -0.06
USP39-206ENST00000448971 ATP8A1Q9Y2Q0 1164 aa14.67□□□□□ -0.06
USP39-206ENST00000448971 CFAP46Q8IYW2 2715 aa14.67□□□□□ -0.06
USP39-206ENST00000448971 hCG_1818297A0A087WSY0 165 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 A0A0U1RQJ8 604 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 A0A1W2PR77 199 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 CCDC66A2RUB6 948 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 IGLON5A6NGN9 336 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 AREL1O15033 823 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 CST8O60676 142 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 SOCS5O75159 536 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 TM7SF2O76062 418 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 PRKCGP05129 697 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 CCNB1P14635 433 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 TIMP2P16035 220 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 ITIH2P19823 946 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 CR2P20023 1033 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 TGM2P21980 687 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 PPIDQ08752 370 aaKnown RBP14.66□□□□□ -0.06
USP39-206ENST00000448971 PDK1Q15118 436 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 RALGPS1Q5JS13 557 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 TMPRSS12Q86WS5 348 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 ZSWIM9Q86XI8 627 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 SYCE1Q8N0S2 351 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 TEX26Q8N6G2 289 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 MFSD2AQ8NA29 543 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 TMEM145Q8NBT3 493 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 EXD1Q8NHP7 514 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 MAML1Q92585 1016 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 HAUS1Q96CS2 278 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 TSGA13Q96PP4 275 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 SEMA3CQ99985 751 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 SLC17A9Q9BYT1 436 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 TSGA10Q9BZW7 698 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 NOD2Q9HC29 1040 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 PCDH12Q9NPG4 1184 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 RBM22Q9NW64 420 aaKnown RBP eCLIP14.66□□□□□ -0.06
USP39-206ENST00000448971 SEPT10Q9P0V9 454 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 PCDHGC4Q9Y5F7 938 aa14.66□□□□□ -0.06
USP39-206ENST00000448971 A0A1B0GTQ1 180 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 A0A1W2PQ67 120 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 A6NNZ2 444 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 KCNK1O00180 336 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 TLR4O00206 839 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 DFNA5O60443 496 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 MMP20O60882 483 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 PAK4O96013 591 aaPredicted RBP14.65□□□□□ -0.06
USP39-206ENST00000448971 HLA-DQB2P05538 268 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 THEGLP0DJG4 465 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 NFKBIAP25963 317 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 CTNNA2P26232 953 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 MMP12P39900 470 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 RWDD2BP57060 319 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 CLDN2P57739 230 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 NXPH1P58417 271 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 POLR2LP62875 67 aaKnown RBP14.65□□□□□ -0.06
USP39-206ENST00000448971 IL9RQ01113 521 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 DSC2Q02487 901 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 OVGP1Q12889 678 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 TRAF2Q12933 501 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 FGL2Q14314 439 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 PPP2R5EQ16537 467 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 PRAMEF14Q5SWL7 426 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 CCDC181Q5TID7 509 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 GCNT7Q6ZNI0 430 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 BZW1Q7L1Q6 419 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms