RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 RCBTB1Q8NDN9 531 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 GPR156Q8NFN8 814 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 DNAJB8Q8NHS0 232 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 PCDH19Q8TAB3 1148 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 PIWIL2Q8TC59 973 aaKnown RBP3.33□□□□□ -1.88
PMS1-215ENST00000447232 UBE2Q2Q8WVN8 375 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 BRF1Q92994 677 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 RTP4Q96DX8 246 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 TEFMQ96QE5 360 aaKnown RBP3.33□□□□□ -1.88
PMS1-215ENST00000447232 MRPL45Q9BRJ2 306 aaKnown RBP3.33□□□□□ -1.88
PMS1-215ENST00000447232 AGXT2Q9BYV1 514 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 NCOA5Q9HCD5 579 aaKnown RBP3.33□□□□□ -1.88
PMS1-215ENST00000447232 CSNK1G1Q9HCP0 422 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 GULP1Q9UBP9 304 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 TLR6Q9Y2C9 796 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 ZNF451Q9Y4E5 1061 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 PCDHGB6Q9Y5F9 930 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 MYO7BQ6PIF6 2116 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 IGHV5-10-1A0A0J9YXX1 117 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 A0A1W2PQH9 124 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 E9PMD0 336 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 E2F3O00716 465 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 RAD51BO15315 384 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 TACC1O75410 805 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 BEST1O76090 585 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 CPNE6O95741 557 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 SRPRAP08240 638 aaKnown RBP3.33□□□□□ -1.88
PMS1-215ENST00000447232 FAM163BP0C2L3 166 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 SCP2P22307 547 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 GNL1P36915 607 aaPredicted RBP3.33□□□□□ -1.88
PMS1-215ENST00000447232 CSKP41240 450 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 SGSHP51688 502 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 EVCP57679 992 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 ZNF445P59923 1031 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 PFN3P60673 137 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 YBX1P67809 324 aaKnown RBP3.33□□□□□ -1.88
PMS1-215ENST00000447232 TLE4Q04727 773 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 CDK18Q07002 472 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 PDE1CQ14123 709 aaPredicted RBP3.33□□□□□ -1.88
PMS1-215ENST00000447232 ERV3-1Q14264 604 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 CLPPQ16740 277 aaPredicted RBP3.33□□□□□ -1.88
PMS1-215ENST00000447232 TSNAXIP1Q2TAA8 658 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 VWA2Q5GFL6 755 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 MPP7Q5T2T1 576 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 DCAF12Q5T6F0 453 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 TTC22Q5TAA0 569 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 HAUS3Q68CZ6 603 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 ANKS6Q68DC2 871 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 SCD5Q86SK9 330 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 C1QL4Q86Z23 238 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 CCDC117Q8IWD4 279 aaPredicted RBP3.33□□□□□ -1.88
PMS1-215ENST00000447232 PHC2Q8IXK0 858 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 PHACTR4Q8IZ21 702 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 NAGSQ8N159 534 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 CISD2Q8N5K1 135 aaKnown RBP3.33□□□□□ -1.88
PMS1-215ENST00000447232 Q8N9G6 341 aaPredicted RBP3.33□□□□□ -1.88
PMS1-215ENST00000447232 CCDC112Q8NEF3 446 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 SMARCD1Q96GM5 515 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 CCDC120Q96HB5 630 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 SPAG5Q96R06 1193 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 CGRRF1Q99675 332 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 SMOQ99835 787 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 SMR3AQ99954 134 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 TRIT1Q9H3H1 467 aaKnown RBP3.33□□□□□ -1.88
PMS1-215ENST00000447232 RDH14Q9HBH5 336 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 DDX19AQ9NUU7 478 aaKnown RBP3.33□□□□□ -1.88
PMS1-215ENST00000447232 SLC39A1Q9NY26 324 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 SLAMF8Q9P0V8 285 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 SLCO3A1Q9UIG8 710 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 ADAM21Q9UKJ8 722 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 ERVW-1Q9UQF0 538 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 OSGIN2Q9Y236 505 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 LRP4O75096 1905 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 FER1L5A0AVI2 2057 aa3.33□□□□□ -1.88
PMS1-215ENST00000447232 A0A1B0GUH1 482 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 ANKRD33BA6NCL7 494 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 TISP43B9A030 160 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 ANKRD63C9JTQ0 380 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 PDIA3P30101 505 aaKnown RBP3.32□□□□□ -1.88
PMS1-215ENST00000447232 IST1P53990 364 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 B4GALNT1Q00973 533 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 TRA2AQ13595 282 aaKnown RBP eCLIP3.32□□□□□ -1.88
PMS1-215ENST00000447232 CHRNA6Q15825 494 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 PLEKHN1Q494U1 663 aaPredicted RBP3.32□□□□□ -1.88
PMS1-215ENST00000447232 DCAF10Q5QP82 559 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 CPZQ66K79 652 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 SEL1L3Q68CR1 1132 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 ADALQ6DHV7 355 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 Q6ZUG5 572 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 GPRIN1Q7Z2K8 1008 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 TADA2BQ86TJ2 420 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 PIM3Q86V86 326 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 FUKQ8N0W3 1084 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 FSTL5Q8N475 847 aaPredicted RBP3.32□□□□□ -1.88
PMS1-215ENST00000447232 FRS2Q8WU20 508 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 RELTQ969Z4 430 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 TMA16Q96EY4 203 aaKnown RBP3.32□□□□□ -1.88
PMS1-215ENST00000447232 HPDLQ96IR7 371 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 CCDC74BQ96LY2 380 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 KLF6Q99612 283 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms