RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 TSPY1Q01534 308 aa4.9□□□□□ -1.63
LINC00440-201ENST00000446579 SCARB2Q14108 478 aa4.9□□□□□ -1.63
LINC00440-201ENST00000446579 PLCB4Q15147 1175 aa4.9□□□□□ -1.63
LINC00440-201ENST00000446579 COL28A1Q2UY09 1125 aa4.9□□□□□ -1.63
LINC00440-201ENST00000446579 MTX3Q5HYI7 312 aa4.9□□□□□ -1.63
LINC00440-201ENST00000446579 ERMARDQ5T6L9 678 aa4.9□□□□□ -1.63
LINC00440-201ENST00000446579 ADALQ6DHV7 355 aa4.9□□□□□ -1.63
LINC00440-201ENST00000446579 ZNF425Q6IV72 752 aa4.9□□□□□ -1.63
LINC00440-201ENST00000446579 ZNF813Q6ZN06 617 aa4.9□□□□□ -1.63
LINC00440-201ENST00000446579 CYB5R4Q7L1T6 521 aa4.9□□□□□ -1.63
LINC00440-201ENST00000446579 UBE2Q1Q7Z7E8 422 aa4.9□□□□□ -1.63
LINC00440-201ENST00000446579 IGFN1Q86VF2 1251 aa4.9□□□□□ -1.63
LINC00440-201ENST00000446579 CCDC25Q86WR0 208 aa4.9□□□□□ -1.63
LINC00440-201ENST00000446579 ZDHHC23Q8IYP9 409 aa4.9□□□□□ -1.63
LINC00440-201ENST00000446579 RNF168Q8IYW5 571 aaPredicted RBP4.9□□□□□ -1.63
LINC00440-201ENST00000446579 POMGNT2Q8NAT1 580 aa4.9□□□□□ -1.63
LINC00440-201ENST00000446579 TDRD5Q8NAT2 981 aaKnown RBP4.9□□□□□ -1.63
LINC00440-201ENST00000446579 C8orf58Q8NAV2 365 aa4.9□□□□□ -1.63
LINC00440-201ENST00000446579 AVL9Q8NBF6 648 aa4.9□□□□□ -1.63
LINC00440-201ENST00000446579 MCPH1Q8NEM0 835 aa4.9□□□□□ -1.63
LINC00440-201ENST00000446579 GABPB2Q8TAK5 448 aaPredicted RBP4.9□□□□□ -1.63
LINC00440-201ENST00000446579 SAT2Q96F10 170 aaPredicted RBP4.9□□□□□ -1.63
LINC00440-201ENST00000446579 TMEM68Q96MH6 324 aa4.9□□□□□ -1.63
LINC00440-201ENST00000446579 GCNAQ96QF7 691 aa4.9□□□□□ -1.63
LINC00440-201ENST00000446579 BBS4Q96RK4 519 aa4.9□□□□□ -1.63
LINC00440-201ENST00000446579 SEPT5Q99719 369 aaPredicted RBP4.9□□□□□ -1.63
LINC00440-201ENST00000446579 APOL6Q9BWW8 343 aa4.9□□□□□ -1.63
LINC00440-201ENST00000446579 RANGRFQ9HD47 186 aaPredicted RBP4.9□□□□□ -1.63
LINC00440-201ENST00000446579 WDR6Q9NNW5 1121 aaKnown RBP4.9□□□□□ -1.63
LINC00440-201ENST00000446579 CTNNAL1Q9UBT7 734 aa4.9□□□□□ -1.63
LINC00440-201ENST00000446579 NENFQ9UMX5 172 aa4.9□□□□□ -1.63
LINC00440-201ENST00000446579 C17orf102A2RUQ5 167 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 HSPB2A8KAH6 182 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 FOXO6A8MYZ6 492 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 KLRF2D3W0D1 207 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 HS6ST1O60243 411 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 RNF8O76064 485 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 SRPRAP08240 638 aaKnown RBP4.89□□□□□ -1.63
LINC00440-201ENST00000446579 CD63P08962 238 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 QDPRP09417 244 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 UNGP13051 313 aaPredicted RBP4.89□□□□□ -1.63
LINC00440-201ENST00000446579 KRT10P13645 584 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 TMEM11P17152 192 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 SRD5A1P18405 259 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 ITGAXP20702 1163 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 AGAP20933 346 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 PON1P27169 355 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 MPGP29372 298 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 EEF1DP29692 281 aaKnown RBP4.89□□□□□ -1.63
LINC00440-201ENST00000446579 SHMT1P34896 483 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 LMAN1P49257 510 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 GRIK3Q13003 919 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 PRPF4BQ13523 1007 aaKnown RBP4.89□□□□□ -1.63
LINC00440-201ENST00000446579 DRAP1Q14919 205 aaPredicted RBP4.89□□□□□ -1.63
LINC00440-201ENST00000446579 HSPB2Q16082 182 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 C15orf59Q2T9L4 293 aaPredicted RBP4.89□□□□□ -1.63
LINC00440-201ENST00000446579 USP41Q3LFD5 358 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 EARS2Q5JPH6 523 aaKnown RBP4.89□□□□□ -1.63
LINC00440-201ENST00000446579 CEP78Q5JTW2 689 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 C1orf141Q5JVX7 400 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 TTC39AQ5SRH9 613 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 ISM2Q6H9L7 571 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 SLC18B1Q6NT16 456 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 CRELD2Q6UXH1 353 aaPredicted RBP4.89□□□□□ -1.63
LINC00440-201ENST00000446579 SEPT14Q6ZU15 432 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 YTHDF3Q7Z739 585 aaKnown RBP4.89□□□□□ -1.63
LINC00440-201ENST00000446579 SERPINA11Q86U17 422 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 KBTBD6Q86V97 674 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 TDRPQ86YL5 185 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 HACE1Q8IYU2 909 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 GALNT16Q8N428 558 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 C9orf106Q8NAJ2 232 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 POGLUT1Q8NBL1 392 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 MAP4K1Q92918 833 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 LRRC59Q96AG4 307 aaKnown RBP4.89□□□□□ -1.63
LINC00440-201ENST00000446579 PGAP3Q96FM1 320 aaPredicted RBP4.89□□□□□ -1.63
LINC00440-201ENST00000446579 SLITRK1Q96PX8 696 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 SRSF8Q9BRL6 282 aaKnown RBP4.89□□□□□ -1.63
LINC00440-201ENST00000446579 ADPGKQ9BRR6 497 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 C1QTNF5Q9BXJ0 243 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 TKTL2Q9H0I9 626 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 SIL1Q9H173 461 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 RNF146Q9NTX7 359 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 SETD4Q9NVD3 440 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 TAB2Q9NYJ8 693 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 C5AR2Q9P296 337 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 IPO11Q9UI26 975 aaKnown RBP4.89□□□□□ -1.63
LINC00440-201ENST00000446579 CCL27Q9Y4X3 112 aa4.89□□□□□ -1.63
LINC00440-201ENST00000446579 ZNF335Q9H4Z2 1342 aaPredicted RBP4.89□□□□□ -1.63
LINC00440-201ENST00000446579 A0A096LPK6 155 aa4.88□□□□□ -1.63
LINC00440-201ENST00000446579 C2CD4BA6NLJ0 364 aa4.88□□□□□ -1.63
LINC00440-201ENST00000446579 SLC25A17O43808 307 aa4.88□□□□□ -1.63
LINC00440-201ENST00000446579 KLK8O60259 260 aa4.88□□□□□ -1.63
LINC00440-201ENST00000446579 MITFO75030 526 aaPredicted RBP4.88□□□□□ -1.63
LINC00440-201ENST00000446579 NKX2-2O95096 273 aa4.88□□□□□ -1.63
LINC00440-201ENST00000446579 TOP3BO95985 862 aaKnown RBP4.88□□□□□ -1.63
LINC00440-201ENST00000446579 SCG2P13521 617 aa4.88□□□□□ -1.63
LINC00440-201ENST00000446579 ZNF182P17025 639 aaPredicted RBP4.88□□□□□ -1.63
LINC00440-201ENST00000446579 SLC16A2P36021 539 aa4.88□□□□□ -1.63
LINC00440-201ENST00000446579 CXCR3P49682 368 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms