RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ZFP37Q9Y6Q3 630 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 FLT1P17948 1338 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 CCDC180Q9P1Z9 1646 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 A8MXE2 369 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 SOCS2O14508 198 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 MDM4O15151 490 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 HBP1O60381 514 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 TMCC1O94876 653 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 CHRM4P08173 479 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 CHRNB1P11230 501 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 SAT1P21673 171 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 CD72P21854 359 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 ATP5DP30049 168 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 TNFSF8P32971 234 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 TTKP33981 857 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 CPOXP36551 454 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 THPOP40225 353 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 NR4A2P43354 598 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 LMAN1P49257 510 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 ZNF41P51814 821 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 CDH8P55286 799 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 RBP5P82980 135 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 TFCP2Q12800 502 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 TNFAIP1Q13829 316 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 COG2Q14746 738 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 TWIST1Q15672 202 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 NTRK2Q16620 822 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 TCP11X2Q5H9J9 407 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 ZNF667Q5HYK9 610 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 ERMARDQ5T6L9 678 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 TMEM268Q5VZI3 342 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 PLBD1Q6P4A8 553 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 TMEM81Q6P7N7 255 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 SARM1Q6SZW1 724 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 C17orf99Q6UX52 265 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 ADGRA1Q86SQ6 560 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 LINC00346Q8IVM7 164 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 THNSL1Q8IYQ7 743 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 CEP57L1Q8IYX8 460 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 TMEM116Q8NCL8 245 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 CMASQ8NFW8 434 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 OR4N2Q8NGD1 307 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 RSPH1Q8WYR4 309 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 SMARCE1Q969G3 411 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 SLC22A18Q96BI1 424 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 FAM149B1Q96BN6 582 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 ZNF653Q96CK0 615 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 PGAP3Q96FM1 320 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 VCPIP1Q96JH7 1222 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 CXorf56Q9H5V9 222 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 DECR2Q9NUI1 292 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 C5AR2Q9P296 337 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 MARCH4Q9P2E8 410 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 CPSF2Q9P2I0 782 aaKnown RBP4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 MTRRQ9UBK8 725 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 GTF3C4Q9UKN8 822 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 ADAM18Q9Y3Q7 739 aa4.63□□□□□ -1.67
HMGB1P48-201ENST00000446155 CUX2O14529 1486 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 SLC7A4O43246 635 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 STRNO43815 780 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 NDUFB8O95169 186 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 OR2C1O95371 312 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 ADAP00813 363 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 SERPINC1P01008 464 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 CDK4P11802 303 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 SKIV2L2P42285 1042 aaKnown RBP4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 ME1P48163 572 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 BFSP1Q12934 665 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 ODF3L2Q3SX64 289 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 ADALQ6DHV7 355 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 HMBOX1Q6NT76 420 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 CRELD2Q6UXH1 353 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 FAM185AQ8N0U4 392 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 CARNMT1Q8N4J0 409 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 POC5Q8NA72 575 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 Q8NFD4 153 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 CADM4Q8NFZ8 388 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 VPS33AQ96AX1 596 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 ZNF419Q96HQ0 510 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 ZNF48Q96MX3 618 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 WDFY2Q96P53 400 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 ABHD1Q96SE0 405 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 IFT27Q9BW83 186 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 SLC29A3Q9BZD2 475 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 C2orf40Q9H1Z8 148 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 SCPEP1Q9HB40 452 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 SPATS2LQ9NUQ6 558 aaKnown RBP4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 GIMAP4Q9NUV9 329 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 IL1RAPL1Q9NZN1 696 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 PEMTQ9UBM1 199 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 PLEKHB1Q9UF11 243 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 DHDHQ9UQ10 334 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 CAPN7Q9Y6W3 813 aa4.62□□□□□ -1.67
HMGB1P48-201ENST00000446155 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 GTPBP10A4D1E9 387 aaKnown RBP4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 GAGE12JA6NER3 117 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 GLOD5A6NK44 160 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 A8MZ25 164 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 RNMTO43148 476 aaKnown RBP4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 TMEM191BP0C7N4 346 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms