RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 FNBP1LQ5T0N5 605 aa17.48■□□□□ 0.39
SGCE-206ENST00000445866 ZDHHC24Q6UX98 284 aa17.48■□□□□ 0.39
SGCE-206ENST00000445866 C1orf210Q8IVY1 113 aa17.48■□□□□ 0.39
SGCE-206ENST00000445866 PDIK1LQ8N165 341 aa17.48■□□□□ 0.39
SGCE-206ENST00000445866 BLOC1S5Q8TDH9 187 aa17.48■□□□□ 0.39
SGCE-206ENST00000445866 RAB7BQ96AH8 199 aa17.48■□□□□ 0.39
SGCE-206ENST00000445866 FAM86C2PA6NEL3 165 aa17.48■□□□□ 0.39
SGCE-206ENST00000445866 SDR42E2A6NKP2 422 aa17.48■□□□□ 0.39
SGCE-206ENST00000445866 AVPR2P30518 371 aa17.48■□□□□ 0.39
SGCE-206ENST00000445866 ARL4CP56559 192 aa17.48■□□□□ 0.39
SGCE-206ENST00000445866 PIP5KL1Q5T9C9 394 aa17.48■□□□□ 0.39
SGCE-206ENST00000445866 USP30Q70CQ3 517 aa17.48■□□□□ 0.39
SGCE-206ENST00000445866 ZCCHC9Q8N567 271 aaKnown RBP17.48■□□□□ 0.39
SGCE-206ENST00000445866 GPR161Q8N6U8 529 aaKnown RBP17.48■□□□□ 0.39
SGCE-206ENST00000445866 DTWD2Q8NBA8 298 aa17.48■□□□□ 0.39
SGCE-206ENST00000445866 OR14C36Q8NHC7 312 aa17.48■□□□□ 0.39
SGCE-206ENST00000445866 SRPK1Q96SB4 655 aaKnown RBP17.48■□□□□ 0.39
SGCE-206ENST00000445866 TPSD1Q9BZJ3 242 aa17.48■□□□□ 0.39
SGCE-206ENST00000445866 MAGEE1Q9HCI5 957 aa17.48■□□□□ 0.39
SGCE-206ENST00000445866 ZDHHC18Q9NUE0 388 aa17.48■□□□□ 0.39
SGCE-206ENST00000445866 NFU1Q9UMS0 254 aa17.48■□□□□ 0.39
SGCE-206ENST00000445866 A0A0U1RQS6 177 aa17.47■□□□□ 0.39
SGCE-206ENST00000445866 K7ESF4 209 aa17.47■□□□□ 0.39
SGCE-206ENST00000445866 PAPSS2O95340 614 aaPredicted RBP17.47■□□□□ 0.39
SGCE-206ENST00000445866 CYP2A6P11509 494 aaPredicted RBP17.47■□□□□ 0.39
SGCE-206ENST00000445866 MGAT1P26572 445 aa17.47■□□□□ 0.39
SGCE-206ENST00000445866 POU6F1Q14863 301 aa17.47■□□□□ 0.39
SGCE-206ENST00000445866 HIF1AQ16665 826 aa17.47■□□□□ 0.39
SGCE-206ENST00000445866 BBS9Q3SYG4 887 aa17.47■□□□□ 0.39
SGCE-206ENST00000445866 DNAJC21Q5F1R6 531 aaKnown RBP17.47■□□□□ 0.39
SGCE-206ENST00000445866 AGBL4Q5VU57 503 aa17.47■□□□□ 0.39
SGCE-206ENST00000445866 ZNF534Q76KX8 674 aa17.47■□□□□ 0.39
SGCE-206ENST00000445866 KBTBD6Q86V97 674 aa17.47■□□□□ 0.39
SGCE-206ENST00000445866 BRSK1Q8TDC3 778 aa17.47■□□□□ 0.39
SGCE-206ENST00000445866 FAM129AQ9BZQ8 928 aa17.47■□□□□ 0.39
SGCE-206ENST00000445866 B4GALT6Q9UBX8 382 aa17.47■□□□□ 0.39
SGCE-206ENST00000445866 SPO11Q9Y5K1 396 aa17.47■□□□□ 0.39
SGCE-206ENST00000445866 FADS3Q9Y5Q0 445 aa17.47■□□□□ 0.39
SGCE-206ENST00000445866 NCOR1O75376 2440 aa17.47■□□□□ 0.39
SGCE-206ENST00000445866 AREL1O15033 823 aa17.46■□□□□ 0.39
SGCE-206ENST00000445866 ZNF217O75362 1048 aa17.46■□□□□ 0.39
SGCE-206ENST00000445866 PCDH8O95206 1070 aa17.46■□□□□ 0.39
SGCE-206ENST00000445866 CRADDP78560 199 aa17.46■□□□□ 0.39
SGCE-206ENST00000445866 CSTF1Q05048 431 aaKnown RBP17.46■□□□□ 0.39
SGCE-206ENST00000445866 ELP6Q0PNE2 266 aa17.46■□□□□ 0.39
SGCE-206ENST00000445866 TMEM31Q5JXX7 168 aa17.46■□□□□ 0.39
SGCE-206ENST00000445866 CASC4Q6P4E1 433 aa17.46■□□□□ 0.39
SGCE-206ENST00000445866 TSSK4Q6SA08 328 aa17.46■□□□□ 0.39
SGCE-206ENST00000445866 CRTC1Q6UUV9 634 aa17.46■□□□□ 0.39
SGCE-206ENST00000445866 CCNI2Q6ZMN8 369 aaPredicted RBP17.46■□□□□ 0.39
SGCE-206ENST00000445866 RASSF3Q86WH2 238 aa17.46■□□□□ 0.39
SGCE-206ENST00000445866 CCDC25Q86WR0 208 aa17.46■□□□□ 0.39
SGCE-206ENST00000445866 MCCC1Q96RQ3 725 aaPredicted RBP17.46■□□□□ 0.39
SGCE-206ENST00000445866 PARD6BQ9BYG5 372 aa17.46■□□□□ 0.39
SGCE-206ENST00000445866 GPR63Q9BZJ6 419 aa17.46■□□□□ 0.39
SGCE-206ENST00000445866 TRABDQ9H4I3 376 aa17.46■□□□□ 0.39
SGCE-206ENST00000445866 MTRF1LQ9UGC7 380 aaKnown RBP17.46■□□□□ 0.39
SGCE-206ENST00000445866 FZD4Q9ULV1 537 aa17.46■□□□□ 0.39
SGCE-206ENST00000445866 CYP8B1Q9UNU6 501 aa17.46■□□□□ 0.39
SGCE-206ENST00000445866 ITM2BQ9Y287 266 aa17.46■□□□□ 0.39
SGCE-206ENST00000445866 CHD5Q8TDI0 1954 aa17.46■□□□□ 0.39
SGCE-206ENST00000445866 NPIPB15A6NHN6 443 aaPredicted RBP17.45■□□□□ 0.38
SGCE-206ENST00000445866 FAM47DPA6NHR8 397 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 AXIN1O15169 862 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 PPFIA2O75334 1257 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 CLDN7O95471 211 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 VIPR1P32241 457 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 MSLNQ13421 630 aaPredicted RBP17.45■□□□□ 0.38
SGCE-206ENST00000445866 SEPT6Q14141 434 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 ARHGEF7Q14155 803 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 MSS51Q4VC12 460 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 CCDC38Q502W7 563 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 TSPAN33Q86UF1 283 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 RLN3Q8WXF3 142 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 LYSMD1Q96S90 227 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 FOXP3Q9BZS1 431 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 IL22Q9GZX6 179 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 BTBD1Q9H0C5 482 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 CD93Q9NPY3 652 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 HACD3Q9P035 362 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 USP36Q9P275 1121 aaKnown RBP17.45■□□□□ 0.38
SGCE-206ENST00000445866 MAD1L1Q9Y6D9 718 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 TBC1D3DA0A087WVF3 549 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 TBC1D3IA0A087WXS9 549 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 TBC1D3EA0A087X179 549 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 TBC1D3KA0A087X1G2 549 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 C1orf232A0A0U1RR37 186 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 MAGEB16A2A368 324 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 TBC1D3FA6NER0 549 aaPredicted RBP17.45■□□□□ 0.38
SGCE-206ENST00000445866 CAPN8A6NHC0 703 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 GOLGA8CPA6NN73 597 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 C2orf81A6NN90 581 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 TBC1D3LB9A6J9 549 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 AURKAO14965 403 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 SLC7A4O43246 635 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 TSPAN6O43657 245 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 AP1G1O43747 822 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 CRTAMO95727 393 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 TBC1D3HP0C7X1 549 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 ADRA1DP25100 572 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms