RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 TBATAQ96M53 351 aa15.74■□□□□ 0.11
SNX13-204ENST00000444712 C20orf27Q9GZN8 174 aa15.74■□□□□ 0.11
SNX13-204ENST00000444712 LRMDAQ9H2I8 198 aa15.74■□□□□ 0.11
SNX13-204ENST00000444712 MTIF3Q9H2K0 278 aaKnown RBP15.74■□□□□ 0.11
SNX13-204ENST00000444712 KIAA1522Q9P206 1035 aaPredicted RBP15.74■□□□□ 0.11
SNX13-204ENST00000444712 VPS51Q9UID3 782 aa15.74■□□□□ 0.11
SNX13-204ENST00000444712 LNPEPQ9UIQ6 1025 aa15.74■□□□□ 0.11
SNX13-204ENST00000444712 VPS9D1Q9Y2B5 631 aa15.74■□□□□ 0.11
SNX13-204ENST00000444712 ACTL7AQ9Y615 435 aa15.74■□□□□ 0.11
SNX13-204ENST00000444712 ARL5AQ9Y689 179 aa15.74■□□□□ 0.11
SNX13-204ENST00000444712 SLC4A7Q9Y6M7 1214 aa15.74■□□□□ 0.11
SNX13-204ENST00000444712 TLL1O43897 1013 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 S1PR4O95977 384 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 GOT2P00505 430 aaKnown RBP15.73■□□□□ 0.11
SNX13-204ENST00000444712 KITP10721 976 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 MYL4P12829 197 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 MZF1P28698 734 aaPredicted RBP15.73■□□□□ 0.11
SNX13-204ENST00000444712 ARSDP51689 593 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 ZNF140P52738 457 aaPredicted RBP15.73■□□□□ 0.11
SNX13-204ENST00000444712 FSCBQ5H9T9 825 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 TMEM240Q5SV17 173 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 HECTD2Q5U5R9 776 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 MFSD6LQ8IWD5 586 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 FSTL5Q8N475 847 aaPredicted RBP15.73■□□□□ 0.11
SNX13-204ENST00000444712 LEMD2Q8NC56 503 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 GBF1Q92538 1859 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 EXOC2Q96KP1 924 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 CORO1BQ9BR76 489 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 POPDC3Q9HBV1 291 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 DNAJC28Q9NX36 388 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 DNMT3BQ9UBC3 853 aaKnown RBP15.73■□□□□ 0.11
SNX13-204ENST00000444712 LHX3Q9UBR4 397 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 ARHGAP26Q9UNA1 814 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 VWA7Q9Y334 891 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 A0A1W2PRU2 124 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 TRAFD1O14545 582 aaPredicted RBP15.73■□□□□ 0.11
SNX13-204ENST00000444712 ITM2AO43736 263 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 SNAP91O60641 907 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 CD160O95971 181 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 RBP1P09455 135 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 LTA4HP09960 611 aaKnown RBP15.73■□□□□ 0.11
SNX13-204ENST00000444712 ALOX15P16050 662 aaPredicted RBP15.73■□□□□ 0.11
SNX13-204ENST00000444712 LPOP22079 712 aaPredicted RBP15.73■□□□□ 0.11
SNX13-204ENST00000444712 ZXDBP98169 803 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 ARHGAP15Q53QZ3 475 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.73■□□□□ 0.11
SNX13-204ENST00000444712 MRPL43Q8N983 215 aaKnown RBP15.73■□□□□ 0.11
SNX13-204ENST00000444712 ZNF557Q8N988 423 aaPredicted RBP15.73■□□□□ 0.11
SNX13-204ENST00000444712 LPCAT1Q8NF37 534 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 HERVK_113Q902F9 699 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 ALG14Q96F25 216 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 CDKN2AIPNLQ96HQ2 116 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 TMEM237Q96Q45 408 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 TCF12Q99081 682 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 SORT1Q99523 831 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 TLR9Q9NR96 1032 aa15.73■□□□□ 0.11
SNX13-204ENST00000444712 MARCOQ9UEW3 520 aaPredicted RBP15.73■□□□□ 0.11
SNX13-204ENST00000444712 APOBEC2Q9Y235 224 aaKnown RBP15.73■□□□□ 0.11
SNX13-204ENST00000444712 KIAA0100Q14667 2235 aaKnown RBP15.73■□□□□ 0.11
SNX13-204ENST00000444712 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.72■□□□□ 0.11
SNX13-204ENST00000444712 CCDC162PA2VCL2 907 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 C2orf71A6NGG8 1288 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 ANKRD66B4E2M5 251 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 TK2O00142 265 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 LEFTY2O00292 366 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 LYPLA1O75608 230 aaPredicted RBP15.72■□□□□ 0.11
SNX13-204ENST00000444712 TARSP26639 723 aaKnown RBP15.72■□□□□ 0.11
SNX13-204ENST00000444712 SERPINB5P36952 375 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 CSNK1DP48730 415 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 LBX1P52954 281 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 EPHA5P54756 1037 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 SLC20A2Q08357 652 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 CTC1Q2NKJ3 1217 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 TYSND1Q2T9J0 566 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 RBM20Q5T481 1227 aaKnown RBP15.72■□□□□ 0.11
SNX13-204ENST00000444712 FBXW10Q5XX13 1052 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 CYB5D1Q6P9G0 228 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 FIBINQ8TAL6 211 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 PDCD6IPQ8WUM4 868 aaKnown RBP15.72■□□□□ 0.11
SNX13-204ENST00000444712 NXNL1Q96CM4 212 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 RILPQ96NA2 401 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 ZNF395Q9H8N7 513 aaPredicted RBP15.72■□□□□ 0.11
SNX13-204ENST00000444712 GPAMQ9HCL2 828 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 KLC4Q9NSK0 619 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 CPSF2Q9P2I0 782 aaKnown RBP15.72■□□□□ 0.11
SNX13-204ENST00000444712 XPR1Q9UBH6 696 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 ZMYM5Q9UJ78 669 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 KCTD3Q9Y597 815 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 TARM1B6A8C7 271 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 FCHO1O14526 889 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 PRLP01236 227 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 SERPINA6P08185 405 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 PTPN2P17706 415 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 CALB2P22676 271 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 PMLP29590 882 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 HOXA9P31269 272 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 GMPRP36959 345 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 GRIA4P48058 902 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 NUMBP49757 651 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 CLCN4P51793 760 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms