RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 TRHDEQ9UKU6 1024 aa15.12■□□□□ 0.01
CSNK1E-210ENST00000442216 CABIN1Q9Y6J0 2220 aa15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 CEP250Q9BV73 2442 aa15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 A6NNZ2 444 aa15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 H7C0C1 242 aa15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 FPGTO14772 594 aa15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 TM4SF5O14894 197 aa15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 MMP2P08253 660 aa15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 ATP5OP48047 213 aa15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 FAM193AP78312 1265 aa15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 SKOR1P84550 965 aa15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 WASHC5Q12768 1159 aa15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 RALGDSQ12967 914 aa15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 ZNF423Q2M1K9 1284 aa15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 HLA-BQ31612 363 aa15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 LIPIQ6XZB0 460 aa15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 KYAT3Q6YP21 454 aaKnown RBP15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 USP45Q70EL2 814 aa15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 CDKL3Q8IVW4 592 aaPredicted RBP15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 OXR1Q8N573 874 aa15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 TADA1Q96BN2 335 aa15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 CENPTQ96BT3 561 aa15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 KLHDC7BQ96G42 594 aa15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 AGAP3Q96P47 875 aa15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 MCCC1Q96RQ3 725 aaPredicted RBP15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 GAREM1Q9H706 876 aa15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 GLOD4Q9HC38 313 aa15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 PCDH9Q9HC56 1237 aa15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 FSCN3Q9NQT6 498 aa15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 DNPEPQ9ULA0 475 aa15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 SNX11Q9Y5W9 270 aa15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 WDR87Q6ZQQ6 2873 aa15.11■□□□□ 0.01
CSNK1E-210ENST00000442216 PSMD11O00231 422 aa15.1■□□□□ 0.01
CSNK1E-210ENST00000442216 PRLP01236 227 aa15.1■□□□□ 0.01
CSNK1E-210ENST00000442216 PDHA1P08559 390 aa15.1■□□□□ 0.01
CSNK1E-210ENST00000442216 ELFN1P0C7U0 828 aa15.1■□□□□ 0.01
CSNK1E-210ENST00000442216 RBP3P10745 1247 aa15.1■□□□□ 0.01
CSNK1E-210ENST00000442216 C6P13671 934 aa15.1■□□□□ 0.01
CSNK1E-210ENST00000442216 VIPR1P32241 457 aa15.1■□□□□ 0.01
CSNK1E-210ENST00000442216 CD86P42081 329 aa15.1■□□□□ 0.01
CSNK1E-210ENST00000442216 ID4P47928 161 aa15.1■□□□□ 0.01
CSNK1E-210ENST00000442216 LIG3P49916 1009 aa15.1■□□□□ 0.01
CSNK1E-210ENST00000442216 NXPH1P58417 271 aa15.1■□□□□ 0.01
CSNK1E-210ENST00000442216 EIF3EP60228 445 aaKnown RBP15.1■□□□□ 0.01
CSNK1E-210ENST00000442216 IHHQ14623 411 aa15.1■□□□□ 0.01
CSNK1E-210ENST00000442216 GCNT7Q6ZNI0 430 aa15.1■□□□□ 0.01
CSNK1E-210ENST00000442216 REXO1L1PQ8IX06 675 aa15.1■□□□□ 0.01
CSNK1E-210ENST00000442216 RAVER1Q8IY67 606 aaKnown RBP15.1■□□□□ 0.01
CSNK1E-210ENST00000442216 RMDN1Q96DB5 314 aa15.1■□□□□ 0.01
CSNK1E-210ENST00000442216 WRAP53Q9BUR4 548 aaKnown RBP15.1■□□□□ 0.01
CSNK1E-210ENST00000442216 FRMD8P1Q9BZ68 369 aaPredicted RBP15.1■□□□□ 0.01
CSNK1E-210ENST00000442216 FZD3Q9NPG1 666 aa15.1■□□□□ 0.01
CSNK1E-210ENST00000442216 GDF3Q9NR23 364 aa15.1■□□□□ 0.01
CSNK1E-210ENST00000442216 GPR27Q9NS67 375 aa15.1■□□□□ 0.01
CSNK1E-210ENST00000442216 B4GALT6Q9UBX8 382 aa15.1■□□□□ 0.01
CSNK1E-210ENST00000442216 PCDHGB2Q9Y5G2 931 aa15.1■□□□□ 0.01
CSNK1E-210ENST00000442216 TDRD6O60522 2096 aaKnown RBP15.1■□□□□ 0.01
CSNK1E-210ENST00000442216 A0A0J9YYE9 177 aa15.09■□□□□ 0.01
CSNK1E-210ENST00000442216 PCNX2A6NKB5 2137 aa15.09■□□□□ 0.01
CSNK1E-210ENST00000442216 RAD51BO15315 384 aa15.09■□□□□ 0.01
CSNK1E-210ENST00000442216 YKT6O15498 198 aa15.09■□□□□ 0.01
CSNK1E-210ENST00000442216 LZTS3O60299 673 aaPredicted RBP15.09■□□□□ 0.01
CSNK1E-210ENST00000442216 TRBC1P01850 177 aa15.09■□□□□ 0.01
CSNK1E-210ENST00000442216 THEGLP0DJG4 465 aa15.09■□□□□ 0.01
CSNK1E-210ENST00000442216 ZNF30P17039 623 aa15.09■□□□□ 0.01
CSNK1E-210ENST00000442216 RBL1P28749 1068 aa15.09■□□□□ 0.01
CSNK1E-210ENST00000442216 RABIFP47224 123 aa15.09■□□□□ 0.01
CSNK1E-210ENST00000442216 EPHB1P54762 984 aa15.09■□□□□ 0.01
CSNK1E-210ENST00000442216 CCDC173Q0VFZ6 552 aa15.09■□□□□ 0.01
CSNK1E-210ENST00000442216 LAYNQ6UX15 382 aa15.09■□□□□ 0.01
CSNK1E-210ENST00000442216 B4GALNT4Q76KP1 1039 aa15.09■□□□□ 0.01
CSNK1E-210ENST00000442216 PID1Q7Z2X4 250 aa15.09■□□□□ 0.01
CSNK1E-210ENST00000442216 ZNF567Q8N184 647 aa15.09■□□□□ 0.01
CSNK1E-210ENST00000442216 CBARPQ8N350 705 aaPredicted RBP15.09■□□□□ 0.01
CSNK1E-210ENST00000442216 TP53I13Q8NBR0 393 aaPredicted RBP15.09■□□□□ 0.01
CSNK1E-210ENST00000442216 BMFQ96LC9 184 aa15.09■□□□□ 0.01
CSNK1E-210ENST00000442216 FCRL5Q96RD9 977 aa15.09■□□□□ 0.01
CSNK1E-210ENST00000442216 LYSMD1Q96S90 227 aa15.09■□□□□ 0.01
CSNK1E-210ENST00000442216 ELF4Q99607 663 aaPredicted RBP15.09■□□□□ 0.01
CSNK1E-210ENST00000442216 TLR10Q9BXR5 811 aa15.09■□□□□ 0.01
CSNK1E-210ENST00000442216 ADGRE3Q9BY15 652 aa15.09■□□□□ 0.01
CSNK1E-210ENST00000442216 CEP41Q9BYV8 373 aa15.09■□□□□ 0.01
CSNK1E-210ENST00000442216 KLHL8Q9P2G9 620 aaPredicted RBP15.09■□□□□ 0.01
CSNK1E-210ENST00000442216 CHKBQ9Y259 395 aa15.09■□□□□ 0.01
CSNK1E-210ENST00000442216 JRKLQ9Y4A0 524 aa15.09■□□□□ 0.01
CSNK1E-210ENST00000442216 A0A1B0GTQ1 180 aa15.08■□□□□ 0
CSNK1E-210ENST00000442216 ANKRD66B4E2M5 251 aa15.08■□□□□ 0
CSNK1E-210ENST00000442216 H0Y8X5 98 aa15.08■□□□□ 0
CSNK1E-210ENST00000442216 STK10O94804 968 aaKnown RBP15.08■□□□□ 0
CSNK1E-210ENST00000442216 HEXIM1O94992 359 aaKnown RBP15.08■□□□□ 0
CSNK1E-210ENST00000442216 PRKCGP05129 697 aa15.08■□□□□ 0
CSNK1E-210ENST00000442216 MSNP26038 577 aaKnown RBP15.08■□□□□ 0
CSNK1E-210ENST00000442216 CD68P34810 354 aaPredicted RBP15.08■□□□□ 0
CSNK1E-210ENST00000442216 RXRGP48443 463 aa15.08■□□□□ 0
CSNK1E-210ENST00000442216 CCT8P50990 548 aa15.08■□□□□ 0
CSNK1E-210ENST00000442216 PFN3P60673 137 aa15.08■□□□□ 0
CSNK1E-210ENST00000442216 YPEL5P62699 121 aa15.08■□□□□ 0
CSNK1E-210ENST00000442216 ARHGEF7Q14155 803 aa15.08■□□□□ 0
CSNK1E-210ENST00000442216 SUZ12Q15022 739 aaKnown RBP15.08■□□□□ 0
CSNK1E-210ENST00000442216 LRRC14Q15048 493 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms