RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 PATE3B3GLJ2 98 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 KCNN4O15554 427 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 GALR2O43603 387 aaPredicted RBP4.8□□□□□ -1.64
EDEM3-203ENST00000439962 SNNO75324 88 aaPredicted RBP4.8□□□□□ -1.64
EDEM3-203ENST00000439962 CNTN5O94779 1100 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 HAUS5O94927 633 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 ALOX15P16050 662 aaPredicted RBP4.8□□□□□ -1.64
EDEM3-203ENST00000439962 DDX6P26196 483 aaKnown RBP eCLIP4.8□□□□□ -1.64
EDEM3-203ENST00000439962 HLA-FP30511 346 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 SSTR1P30872 391 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 MAGEA12P43365 314 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 SERPINB4P48594 390 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 DHPSP49366 369 aaPredicted RBP4.8□□□□□ -1.64
EDEM3-203ENST00000439962 RAP1GDS1P52306 607 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 ARFIP2P53365 341 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 GAD2Q05329 585 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 DEUP1Q05D60 604 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 USP4Q13107 963 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 PDGFRLQ15198 375 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 DNAL1Q4LDG9 190 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 FNDC3BQ53EP0 1204 aaKnown RBP4.8□□□□□ -1.64
EDEM3-203ENST00000439962 PPP6R3Q5H9R7 873 aaPredicted RBP4.8□□□□□ -1.64
EDEM3-203ENST00000439962 TRNP1Q6NT89 227 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 CLNKQ7Z7G1 428 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 C14orf80Q86SX3 495 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 TBC1D1Q86TI0 1168 aaPredicted RBP4.8□□□□□ -1.64
EDEM3-203ENST00000439962 CAND1Q86VP6 1230 aaKnown RBP4.8□□□□□ -1.64
EDEM3-203ENST00000439962 MAML2Q8IZL2 1156 aaPredicted RBP4.8□□□□□ -1.64
EDEM3-203ENST00000439962 IL17RCQ8NAC3 791 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 OR2I1PQ8NGU4 316 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 RDH11Q8TC12 318 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 FATE1Q969F0 183 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 ERP27Q96DN0 273 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 PTCD3Q96EY7 689 aaKnown RBP4.8□□□□□ -1.64
EDEM3-203ENST00000439962 NSL1Q96IY1 281 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 BTBD10Q9BSF8 475 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 CCDC28BQ9BUN5 200 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 MUC3BQ9H195 1237 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 WDCPQ9H6R7 721 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 CAAP1Q9H8G2 361 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 RNPEPL1Q9HAU8 725 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 ETNK1Q9HBU6 452 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 RAB6BQ9NRW1 208 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 RXFP3Q9NSD7 469 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 SLCO3A1Q9UIG8 710 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 MAFFQ9ULX9 164 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 AP4E1Q9UPM8 1137 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 PTPRDP23468 1912 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 GREB1Q4ZG55 1949 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 MIA3Q5JRA6 1907 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 CACNA1BQ00975 2339 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 DOCK9Q9BZ29 2069 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 A0A1W2PPM1 405 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 E2F8A0AVK6 867 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 SDR42E2A6NKP2 422 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 KRT16P08779 473 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 CD48P09326 243 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 DLDP09622 509 aaKnown RBP4.8□□□□□ -1.64
EDEM3-203ENST00000439962 MX2P20592 715 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 GLDCP23378 1020 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 ADSLP30566 484 aaPredicted RBP4.8□□□□□ -1.64
EDEM3-203ENST00000439962 SLC11A2P49281 568 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 CSE1LP55060 971 aaKnown RBP4.8□□□□□ -1.64
EDEM3-203ENST00000439962 IRX1P78414 480 aaPredicted RBP4.8□□□□□ -1.64
EDEM3-203ENST00000439962 SEMG2Q02383 582 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 NIPAL4Q0D2K0 466 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 MTA1Q13330 715 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 UAP1L1Q3KQV9 507 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 KBTBD12Q3ZCT8 623 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 CCDC153Q494R4 210 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 TMEM196Q5HYL7 178 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 RAB41Q5JT25 222 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 GRTP1Q5TC63 336 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 TMEM215Q68D42 235 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 NADSYN1Q6IA69 706 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 GRAMD4Q6IC98 578 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 RTL10Q7L3V2 364 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 LRRC49Q8IUZ0 686 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 ANKMY2Q8IV38 441 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.8□□□□□ -1.64
EDEM3-203ENST00000439962 APCDD1Q8J025 514 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 RYBPQ8N488 228 aaPredicted RBP4.8□□□□□ -1.64
EDEM3-203ENST00000439962 TERB1Q8NA31 727 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 PTCD2Q8WV60 388 aaKnown RBP4.8□□□□□ -1.64
EDEM3-203ENST00000439962 HTR3CQ8WXA8 447 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 SREK1Q8WXA9 508 aaKnown RBP4.8□□□□□ -1.64
EDEM3-203ENST00000439962 E2F7Q96AV8 911 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 SLC7A6OSQ96CW6 309 aaPredicted RBP4.8□□□□□ -1.64
EDEM3-203ENST00000439962 PWWP2AQ96N64 755 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 CSPG4P5Q96PW8 444 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 NPY6RQ99463 290 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 TRPV4Q9HBA0 871 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 DLGAP2Q9P1A6 1054 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 TBC1D14Q9P2M4 693 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 PLA2G4CQ9UP65 541 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 CHMP2BQ9UQN3 213 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 LRRC42Q9Y546 428 aa4.8□□□□□ -1.64
EDEM3-203ENST00000439962 DENND4AQ7Z401 1863 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 A0A0D9SEW6 157 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 TMEM114B3SHH9 223 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms