RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 HECTD2Q5U5R9 776 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 LIPMQ5VYY2 423 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 FAM45BPQ6NSW5 357 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 MRNIPQ6NTE8 343 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 NCEH1Q6PIU2 408 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 NAPRTQ6XQN6 538 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 ATG14Q6ZNE5 492 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 KIF2BQ8N4N8 673 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 MAB21L3Q8N8X9 362 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 TTC8Q8TAM2 541 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 FAM45AQ8TCE6 357 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 NXNL1Q96CM4 212 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 SCYL1Q96KG9 808 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 MRPL57Q9BQC6 102 aaKnown RBP11.82□□□□□ -0.52
SMAD3-202ENST00000439724 ZBED2Q9BTP6 218 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 GATA5Q9BWX5 397 aaPredicted RBP11.82□□□□□ -0.52
SMAD3-202ENST00000439724 EMILIN2Q9BXX0 1053 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 MRPL46Q9H2W6 279 aaKnown RBP11.82□□□□□ -0.52
SMAD3-202ENST00000439724 KLC4Q9NSK0 619 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 CFAP97Q9P2B7 532 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 CPSF2Q9P2I0 782 aaKnown RBP11.82□□□□□ -0.52
SMAD3-202ENST00000439724 XPR1Q9UBH6 696 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 VPS51Q9UID3 782 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 HAO1Q9UJM8 370 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 VPS28Q9UK41 221 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 TRIM33Q9UPN9 1127 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 SH3BP1Q9Y3L3 701 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 SPO11Q9Y5K1 396 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 RAI2Q9Y5P3 530 aa11.82□□□□□ -0.52
SMAD3-202ENST00000439724 OR51F1A6NGY5 319 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 CCL22O00626 93 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 SCAMP3O14828 347 aaKnown RBP11.81□□□□□ -0.52
SMAD3-202ENST00000439724 CD3EAPO15446 510 aaKnown RBP11.81□□□□□ -0.52
SMAD3-202ENST00000439724 HSPA4LO95757 839 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 GLUD1P00367 558 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 SERPINA6P08185 405 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 PIRTP0C851 137 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 HK2P52789 917 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 PGGT1BP53609 377 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 TRAF2Q12933 501 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 RIPK1Q13546 671 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 TBCCQ15814 346 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 MPPE1Q53F39 396 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 PSRC1Q6PGN9 363 aaPredicted RBP11.81□□□□□ -0.52
SMAD3-202ENST00000439724 AFTPHQ6ULP2 937 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 LINGO4Q6UY18 593 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 RTL10Q7L3V2 364 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 ALYREFQ86V81 257 aaKnown RBP11.81□□□□□ -0.52
SMAD3-202ENST00000439724 MFN1Q8IWA4 741 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 TDRD5Q8NAT2 981 aaKnown RBP11.81□□□□□ -0.52
SMAD3-202ENST00000439724 OR13C4Q8NGS5 318 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 WFDC5Q8TCV5 224 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 RMDN1Q96DB5 314 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 PTCD3Q96EY7 689 aaKnown RBP11.81□□□□□ -0.52
SMAD3-202ENST00000439724 PRR11Q96HE9 360 aaPredicted RBP11.81□□□□□ -0.52
SMAD3-202ENST00000439724 CDKN2AIPNLQ96HQ2 116 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 NSL1Q96IY1 281 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 RAB3IPQ96QF0 476 aaPredicted RBP11.81□□□□□ -0.52
SMAD3-202ENST00000439724 NDNQ99608 321 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 RAD9AQ99638 391 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 TCF25Q9BQ70 676 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 ADGRE3Q9BY15 652 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 NMUR2Q9GZQ4 415 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 DRC3Q9H069 523 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 ASAH2Q9NR71 780 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 IGSF5Q9NSI5 407 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 CATSPERZQ9NTU4 200 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 ARL8BQ9NVJ2 186 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 PCDH10Q9P2E7 1040 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 SORCS3Q9UPU3 1222 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 CXorf51AA0A1B0GTR3 108 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 A0A1W2PRU2 124 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 ZNF195O14628 629 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 KRT16P08779 473 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 LTA4HP09960 611 aaKnown RBP11.81□□□□□ -0.52
SMAD3-202ENST00000439724 MYL4P12829 197 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 FDXRP22570 491 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 CALB2P22676 271 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 PTPN4P29074 926 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 HNRNPH1P31943 449 aaKnown RBP11.81□□□□□ -0.52
SMAD3-202ENST00000439724 BMPR1AP36894 532 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 GLRBP48167 497 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 EPHA5P54756 1037 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 ERVFC1P60507 584 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 RHOAP61586 193 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 AP1S1P61966 158 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 TUBB3Q13509 450 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 RCN2Q14257 317 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 FAM83EQ2M2I3 478 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 TECRLQ5HYJ1 363 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 PPM1LQ5SGD2 360 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 TMEM240Q5SV17 173 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 AGAP9Q5VTM2 703 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 MAVSQ7Z434 540 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 GLT6D1Q7Z4J2 308 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 UBE2Q1Q7Z7E8 422 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 TTC7BQ86TV6 843 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 LDB1Q86U70 411 aaPredicted RBP11.81□□□□□ -0.52
SMAD3-202ENST00000439724 RNF135Q8IUD6 432 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 BBS7Q8IWZ6 715 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms