RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 EIF4A2Q14240 407 aaKnown RBP3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 USP41Q3LFD5 358 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 PLEKHA7Q6IQ23 1121 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 ZNF549Q6P9A3 640 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 TBC1D1Q86TI0 1168 aaPredicted RBP3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 TDRPQ86YL5 185 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 CNTROBQ8N137 903 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 PDILTQ8N807 584 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 PRR26Q8N8Z3 221 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 AGBL3Q8NEM8 1001 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 OR14A16Q8NHC5 309 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 PSPC1Q8WXF1 523 aaKnown RBP3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 ARHGEF2Q92974 986 aaKnown RBP3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 HARBI1Q96MB7 349 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 PIP5K1AQ99755 562 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 MRPL44Q9H9J2 332 aaKnown RBP3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 FBRSL1Q9HCM7 1045 aaKnown RBP3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 WNT16Q9UBV4 365 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 PNMA2Q9UL42 364 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 MYO6Q9UM54 1294 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 PCDHA7Q9UN72 937 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 ERVK-11Q9UQG0 969 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 PTGDR2Q9Y5Y4 395 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 LYVE1Q9Y5Y7 322 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 PSAT1Q9Y617 370 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 KCNE2Q9Y6J6 123 aa3.89□□□□□ -1.79
LSM1P1-201ENST00000438629 A0A1B0GVT2 93 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 AKR1B15C9JRZ8 316 aaPredicted RBP3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 INAFM1C9JVW0 142 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 HNRNPCL1O60812 293 aaKnown RBP3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 PAGE4O60829 102 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 SERPINI2O75830 405 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 IPO7O95373 1038 aaKnown RBP3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 EIF2S1P05198 315 aaKnown RBP3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 PRSS2P07478 247 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 ACADMP11310 421 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 LAMP2P13473 410 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 KRT10P13645 584 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 ZNF182P17025 639 aaPredicted RBP3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 ITGAXP20702 1163 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 LMO1P25800 156 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 RPL3P39023 403 aaKnown RBP3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 RFX5P48382 616 aaPredicted RBP3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 DCAF7P61962 342 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 ECT2LQ008S8 904 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 Q0VFX4 171 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 CSTF3Q12996 717 aaKnown RBP3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 GRIK3Q13003 919 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 SIM2Q14190 667 aaPredicted RBP3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 ERV3-1Q14264 604 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 FGFBP1Q14512 234 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 ODF3L2Q3SX64 289 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 SGO1Q5FBB7 561 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 PPP6R3Q5H9R7 873 aaPredicted RBP3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 C6orf141Q5SZD1 244 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 WDR78Q5VTH9 848 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 TYW3Q6IPR3 259 aaKnown RBP3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 LRRC8EQ6NSJ5 796 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 METTL2BQ6P1Q9 378 aaKnown RBP3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 TSSK4Q6SA08 328 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 SARM1Q6SZW1 724 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 LCTLQ6UWM7 567 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 C9orf47Q6ZRZ4 202 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 SHFQ7M4L6 423 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 WDR63Q8IWG1 891 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 AADATQ8N5Z0 425 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 IQCF1Q8N6M8 205 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 FRMD1Q8N878 549 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 TMEM116Q8NCL8 245 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 HUS1BQ8NHY5 278 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 GPT2Q8TD30 523 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 KCNG4Q8TDN1 519 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 OIT3Q8WWZ8 545 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 METTL2AQ96IZ6 378 aaKnown RBP3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 SH3GL2Q99962 352 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 NCAPGQ9BPX3 1015 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 TREX2Q9BQ50 279 aaPredicted RBP3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 FAM110AQ9BQ89 295 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 IFIH1Q9BYX4 1025 aaKnown RBP3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 GLIS2Q9BZE0 524 aaPredicted RBP3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 MUC13Q9H3R2 512 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 CLK4Q9HAZ1 481 aaKnown RBP3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 SLC6A13Q9NSD5 602 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 CISD1Q9NZ45 108 aaKnown RBP3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 FBXO9Q9UK97 447 aaPredicted RBP3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 INSL5Q9Y5Q6 135 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 CEPT1Q9Y6K0 416 aa3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 ATXN2Q99700 1313 aaKnown RBP3.88□□□□□ -1.79
LSM1P1-201ENST00000438629 FAM237AA0A1B0GTK4 181 aa3.87□□□□□ -1.79
LSM1P1-201ENST00000438629 TMEM202A6NGA9 273 aa3.87□□□□□ -1.79
LSM1P1-201ENST00000438629 INSIG1O15503 277 aa3.87□□□□□ -1.79
LSM1P1-201ENST00000438629 TGFB1I1O43294 461 aa3.87□□□□□ -1.79
LSM1P1-201ENST00000438629 TIPRLO75663 272 aa3.87□□□□□ -1.79
LSM1P1-201ENST00000438629 SLC25A12O75746 678 aa3.87□□□□□ -1.79
LSM1P1-201ENST00000438629 SNHG28P0DPA3 235 aa3.87□□□□□ -1.79
LSM1P1-201ENST00000438629 EDN2P20800 178 aa3.87□□□□□ -1.79
LSM1P1-201ENST00000438629 ARRB2P32121 409 aa3.87□□□□□ -1.79
LSM1P1-201ENST00000438629 ABATP80404 500 aa3.87□□□□□ -1.79
LSM1P1-201ENST00000438629 EGR4Q05215 589 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms