RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 ACOD1A6NK06 481 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 E9PBE3 544 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 STMND1H3BQB6 276 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 F2RL2O00254 374 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 TRIM24O15164 1050 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 CASC3O15234 703 aaKnown RBP3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 DHHO43323 396 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 BUB1O43683 1085 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 NUDT21O43809 227 aaKnown RBP3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 GMFGO60234 142 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 PRDM1O75626 825 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 FLOT1O75955 427 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 SLCO2B1O94956 709 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 PCDH8O95206 1070 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 SERPINC1P01008 464 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 TGFAP01135 160 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 IL1AP01583 271 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 KLKB1P03952 638 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 ZFYP08048 801 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 FTH1P19P0C7X4 201 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 GABRB1P18505 474 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 AHCYP23526 432 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 ALDH4A1P30038 563 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 CHRNA3P32297 505 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 WNT3P56703 355 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 CARD18P57730 90 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 UBE2HP62256 183 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 SPAG1Q07617 926 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 SF3A3Q12874 501 aaKnown RBP eCLIP3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 BNIP1Q12981 228 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 THOC5Q13769 683 aaKnown RBP3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 BOP1Q14137 746 aaKnown RBP3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 SQLEQ14534 574 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 IL11RAQ14626 422 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 TDRD12Q587J7 1177 aaKnown RBP3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 DNTTIP2Q5QJE6 756 aaKnown RBP3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 TTC38Q5R3I4 469 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 RIPPLY2Q5TAB7 128 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 MRNIPQ6NTE8 343 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 PAPD4Q6PIY7 484 aaKnown RBP3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 CORO6Q6QEF8 472 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 SLC36A4Q6YBV0 504 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 GADL1Q6ZQY3 521 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 RBM43Q6ZSC3 357 aaKnown RBP3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 HTR3DQ70Z44 454 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 CLEC14AQ86T13 490 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 CEP57Q86XR8 500 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 PSTKQ8IV42 348 aaKnown RBP3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 MCEMP1Q8IX19 187 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 YAF2Q8IY57 180 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 KRT222Q8N1A0 295 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 BBS5Q8N3I7 341 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 ZNF321PQ8N8H1 164 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 PI4KAP1Q8N8J0 262 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 RBM15BQ8NDT2 890 aaKnown RBP3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 OR13C2Q8NGS9 318 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 MIPOL1Q8TD10 442 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 ST7LQ8TDW4 575 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 CHURC1Q8WUH1 139 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 THRSPQ92748 146 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 SYN2Q92777 582 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 DDX17Q92841 729 aaKnown RBP3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 C19orf60Q96EN9 201 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 C11orf24Q96F05 449 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 RBM17Q96I25 401 aaKnown RBP3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 TMX3Q96JJ7 454 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 TTC25Q96NG3 672 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 WDFY2Q96P53 400 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 NUDCD1Q96RS6 583 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 INTS14Q96SY0 518 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 FOXB1Q99853 325 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 CCDC77Q9BR77 488 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 THUMPD2Q9BTF0 503 aaKnown RBP3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 SLC25A23Q9BV35 468 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 GLIS2Q9BZE0 524 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 CCSER1Q9C0I3 900 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 KCNH6Q9H252 994 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 CARD9Q9H257 536 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 SERHL2Q9H4I8 314 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 STN1Q9H668 368 aaKnown RBP3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 PLEKHA2Q9HB19 425 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 PARVGQ9HBI0 331 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 SYTL2Q9HCH5 934 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 FAM114A2Q9NRY5 505 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 CENPMQ9NSP4 180 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 BEX4Q9NWD9 120 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 SMPD3Q9NY59 655 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 TRPM5Q9NZQ8 1165 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 CHMP5Q9NZZ3 219 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 LRIT1Q9P2V4 623 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 DKK4Q9UBT3 224 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 SEC63Q9UGP8 760 aaKnown RBP3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 MAD2L2Q9UI95 211 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 LEF1Q9UJU2 399 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 CDH7Q9ULB5 785 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 CAPN11Q9UMQ6 739 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 USP18Q9UMW8 372 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 SLC8A2Q9UPR5 921 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 MTMR6Q9Y217 621 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 INSL6Q9Y581 213 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms