RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 DPP7Q9UHL4 492 aa21.21■□□□□ 0.99
PTPRF-207ENST00000436724 RFXAPO00287 272 aa21.21■□□□□ 0.99
PTPRF-207ENST00000436724 TRIM24O15164 1050 aa21.21■□□□□ 0.99
PTPRF-207ENST00000436724 PHGDHO43175 533 aaKnown RBP21.21■□□□□ 0.99
PTPRF-207ENST00000436724 EDF1O60869 148 aaKnown RBP21.21■□□□□ 0.99
PTPRF-207ENST00000436724 GLRA3O75311 464 aa21.21■□□□□ 0.99
PTPRF-207ENST00000436724 C2P06681 752 aa21.21■□□□□ 0.99
PTPRF-207ENST00000436724 ZNF460Q14592 562 aa21.21■□□□□ 0.99
PTPRF-207ENST00000436724 USP10Q14694 798 aaKnown RBP21.21■□□□□ 0.99
PTPRF-207ENST00000436724 FUT11Q495W5 492 aa21.21■□□□□ 0.99
PTPRF-207ENST00000436724 GALNTL6Q49A17 601 aa21.21■□□□□ 0.99
PTPRF-207ENST00000436724 PPP2R2DQ66LE6 453 aa21.21■□□□□ 0.99
PTPRF-207ENST00000436724 NLRP9Q7RTR0 991 aa21.21■□□□□ 0.99
PTPRF-207ENST00000436724 CAMK1DQ8IU85 385 aa21.21■□□□□ 0.99
PTPRF-207ENST00000436724 CCDC63Q8NA47 563 aa21.21■□□□□ 0.99
PTPRF-207ENST00000436724 APOL5Q9BWW9 433 aa21.21■□□□□ 0.99
PTPRF-207ENST00000436724 SPHK2Q9NRA0 654 aa21.21■□□□□ 0.99
PTPRF-207ENST00000436724 DCDC2Q9UHG0 476 aa21.21■□□□□ 0.99
PTPRF-207ENST00000436724 EVLQ9UI08 416 aaPredicted RBP21.21■□□□□ 0.99
PTPRF-207ENST00000436724 PCDHB9Q9Y5E1 797 aa21.21■□□□□ 0.99
PTPRF-207ENST00000436724 ANKRD66B4E2M5 251 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 ZNF197O14709 1029 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 SLC7A4O43246 635 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 ZNF821O75541 412 aaPredicted RBP21.2■□□□□ 0.98
PTPRF-207ENST00000436724 UBOX5O94941 541 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 GSRP00390 522 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 PENKP01210 267 aaPredicted RBP21.2■□□□□ 0.98
PTPRF-207ENST00000436724 TYRP14679 529 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 GTF2A1P52655 376 aaPredicted RBP21.2■□□□□ 0.98
PTPRF-207ENST00000436724 USP4Q13107 963 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 UGP2Q16851 508 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 OTOAQ7RTW8 1153 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 GLT6D1Q7Z4J2 308 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 SPATA21Q7Z572 469 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 ADGRG2Q8IZP9 1017 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 MYLIPQ8WY64 445 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 CD248Q9HCU0 757 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 ABL2P42684 1182 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 ACVR1Q04771 509 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 DUSP6Q16828 381 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 DGKKQ5KSL6 1271 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 ARMC3Q5W041 872 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 CES4AQ5XG92 561 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 RAPH1Q70E73 1250 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 CILP2Q8IUL8 1156 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 CEP97Q8IW35 865 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 EFHBQ8N7U6 833 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 NAT16Q8N8M0 369 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 GPATCH11Q8N954 259 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 NDNQ99608 321 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 MFSD1Q9H3U5 465 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 EYSQ5T1H1 3165 aa21.2■□□□□ 0.98
PTPRF-207ENST00000436724 C2orf16Q68DN1 1984 aa21.19■□□□□ 0.98
PTPRF-207ENST00000436724 FAM95CA0A1B0GW59 222 aa21.19■□□□□ 0.98
PTPRF-207ENST00000436724 CCDC162PA2VCL2 907 aa21.19■□□□□ 0.98
PTPRF-207ENST00000436724 MGRN1O60291 552 aa21.19■□□□□ 0.98
PTPRF-207ENST00000436724 PLIN3O60664 434 aa21.19■□□□□ 0.98
PTPRF-207ENST00000436724 PIGNO95427 931 aa21.19■□□□□ 0.98
PTPRF-207ENST00000436724 GOT2P00505 430 aaKnown RBP21.19■□□□□ 0.98
PTPRF-207ENST00000436724 CD151P48509 253 aa21.19■□□□□ 0.98
PTPRF-207ENST00000436724 ELF3P78545 371 aaPredicted RBP21.19■□□□□ 0.98
PTPRF-207ENST00000436724 RBM20Q5T481 1227 aaKnown RBP21.19■□□□□ 0.98
PTPRF-207ENST00000436724 KYAT3Q6YP21 454 aaKnown RBP21.19■□□□□ 0.98
PTPRF-207ENST00000436724 ADGRE3Q9BY15 652 aa21.19■□□□□ 0.98
PTPRF-207ENST00000436724 ARL2BPQ9Y2Y0 163 aa21.19■□□□□ 0.98
PTPRF-207ENST00000436724 DNAJC6O75061 913 aa21.19■□□□□ 0.98
PTPRF-207ENST00000436724 PRSS56P0CW18 603 aa21.19■□□□□ 0.98
PTPRF-207ENST00000436724 SP100P23497 879 aaPredicted RBP21.19■□□□□ 0.98
PTPRF-207ENST00000436724 CSRP3P50461 194 aa21.19■□□□□ 0.98
PTPRF-207ENST00000436724 PLK1P53350 603 aa21.19■□□□□ 0.98
PTPRF-207ENST00000436724 OVGP1Q12889 678 aa21.19■□□□□ 0.98
PTPRF-207ENST00000436724 OR4K2Q8NGD2 314 aa21.19■□□□□ 0.98
PTPRF-207ENST00000436724 CALML6Q8TD86 181 aa21.19■□□□□ 0.98
PTPRF-207ENST00000436724 RSPRY1Q96DX4 576 aa21.19■□□□□ 0.98
PTPRF-207ENST00000436724 IGFLR1Q9H665 355 aa21.19■□□□□ 0.98
PTPRF-207ENST00000436724 CHUKO15111 745 aa21.18■□□□□ 0.98
PTPRF-207ENST00000436724 BNIP3LO60238 219 aa21.18■□□□□ 0.98
PTPRF-207ENST00000436724 BPGMP07738 259 aa21.18■□□□□ 0.98
PTPRF-207ENST00000436724 SRCP12931 536 aa21.18■□□□□ 0.98
PTPRF-207ENST00000436724 VIPR2P41587 438 aa21.18■□□□□ 0.98
PTPRF-207ENST00000436724 ZNF140P52738 457 aaPredicted RBP21.18■□□□□ 0.98
PTPRF-207ENST00000436724 CLEC14AQ86T13 490 aa21.18■□□□□ 0.98
PTPRF-207ENST00000436724 NUDCD3Q8IVD9 361 aa21.18■□□□□ 0.98
PTPRF-207ENST00000436724 TNS4Q8IZW8 715 aa21.18■□□□□ 0.98
PTPRF-207ENST00000436724 STYXQ8WUJ0 223 aa21.18■□□□□ 0.98
PTPRF-207ENST00000436724 ELMO2Q96JJ3 720 aa21.18■□□□□ 0.98
PTPRF-207ENST00000436724 TBC1D14Q9P2M4 693 aa21.18■□□□□ 0.98
PTPRF-207ENST00000436724 SOBPA7XYQ1 873 aa21.17■□□□□ 0.98
PTPRF-207ENST00000436724 FZD6O60353 706 aa21.17■□□□□ 0.98
PTPRF-207ENST00000436724 RPP40O75818 363 aaKnown RBP21.17■□□□□ 0.98
PTPRF-207ENST00000436724 CRTAMO95727 393 aa21.17■□□□□ 0.98
PTPRF-207ENST00000436724 PROCP04070 461 aa21.17■□□□□ 0.98
PTPRF-207ENST00000436724 MPOP05164 745 aa21.17■□□□□ 0.98
PTPRF-207ENST00000436724 SLC35E2BP0CK96 405 aa21.17■□□□□ 0.98
PTPRF-207ENST00000436724 KCNA4P22459 653 aa21.17■□□□□ 0.98
PTPRF-207ENST00000436724 LEPRP48357 1165 aaKnown RBP21.17■□□□□ 0.98
PTPRF-207ENST00000436724 SEMA3AQ14563 771 aa21.17■□□□□ 0.98
PTPRF-207ENST00000436724 CHI3L2Q15782 390 aa21.17■□□□□ 0.98
PTPRF-207ENST00000436724 TRIM68Q6AZZ1 485 aa21.17■□□□□ 0.98
PTPRF-207ENST00000436724 ZCCHC23Q6ZST2 131 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms