RNA–Protein interactions for RNA: ENST00000434333.1

HLA-B-250, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-250ENST00000434333 SEPT3Q9UH03 358 aa20.22■□□□□ 0.83
HLA-B-250ENST00000434333 RAI2Q9Y5P3 530 aa20.22■□□□□ 0.83
HLA-B-250ENST00000434333 BPTFQ12830 3046 aa20.21■□□□□ 0.83
HLA-B-250ENST00000434333 SYCE3A1L190 88 aa20.21■□□□□ 0.83
HLA-B-250ENST00000434333 TTC24A2A3L6 582 aaPredicted RBP20.21■□□□□ 0.83
HLA-B-250ENST00000434333 RRP8O43159 456 aaKnown RBP20.21■□□□□ 0.83
HLA-B-250ENST00000434333 RECQL5O94762 991 aaPredicted RBP20.21■□□□□ 0.83
HLA-B-250ENST00000434333 RASGRP1O95267 797 aa20.21■□□□□ 0.83
HLA-B-250ENST00000434333 LSSP48449 732 aa20.21■□□□□ 0.83
HLA-B-250ENST00000434333 SCNN1BP51168 640 aa20.21■□□□□ 0.83
HLA-B-250ENST00000434333 AP1S1P61966 158 aa20.21■□□□□ 0.83
HLA-B-250ENST00000434333 SLC25A11Q02978 314 aaKnown RBP20.21■□□□□ 0.83
HLA-B-250ENST00000434333 BOLA3Q53S33 107 aa20.21■□□□□ 0.83
HLA-B-250ENST00000434333 DPPA4Q7L190 304 aa20.21■□□□□ 0.83
HLA-B-250ENST00000434333 PGBD5Q8N414 524 aa20.21■□□□□ 0.83
HLA-B-250ENST00000434333 FSTL5Q8N475 847 aaPredicted RBP20.21■□□□□ 0.83
HLA-B-250ENST00000434333 NIPA2Q8N8Q9 360 aa20.21■□□□□ 0.83
HLA-B-250ENST00000434333 PCDH19Q8TAB3 1148 aa20.21■□□□□ 0.83
HLA-B-250ENST00000434333 HSPH1Q92598 858 aa20.21■□□□□ 0.83
HLA-B-250ENST00000434333 SYN2Q92777 582 aaPredicted RBP20.21■□□□□ 0.83
HLA-B-250ENST00000434333 PDXPQ96GD0 296 aa20.21■□□□□ 0.83
HLA-B-250ENST00000434333 HIC2Q96JB3 615 aa20.21■□□□□ 0.83
HLA-B-250ENST00000434333 BTBD6Q96KE9 485 aa20.21■□□□□ 0.83
HLA-B-250ENST00000434333 THAP2Q9H0W7 228 aa20.21■□□□□ 0.83
HLA-B-250ENST00000434333 POLR1BQ9H9Y6 1135 aa20.21■□□□□ 0.83
HLA-B-250ENST00000434333 ASCL3Q9NQ33 180 aa20.21■□□□□ 0.83
HLA-B-250ENST00000434333 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.21■□□□□ 0.83
HLA-B-250ENST00000434333 ENTPD2Q9Y5L3 495 aa20.21■□□□□ 0.83
HLA-B-250ENST00000434333 HTRA2O43464 458 aaPredicted RBP20.2■□□□□ 0.82
HLA-B-250ENST00000434333 MAFKO60675 156 aa20.2■□□□□ 0.82
HLA-B-250ENST00000434333 HTR1BP28222 390 aa20.2■□□□□ 0.82
HLA-B-250ENST00000434333 ARL4AP40617 200 aa20.2■□□□□ 0.82
HLA-B-250ENST00000434333 RPIAP49247 311 aa20.2■□□□□ 0.82
HLA-B-250ENST00000434333 PDX1P52945 283 aa20.2■□□□□ 0.82
HLA-B-250ENST00000434333 SRP54P61011 504 aaKnown RBP20.2■□□□□ 0.82
HLA-B-250ENST00000434333 PIGHQ14442 188 aaPredicted RBP20.2■□□□□ 0.82
HLA-B-250ENST00000434333 ELOCQ15369 112 aa20.2■□□□□ 0.82
HLA-B-250ENST00000434333 PELI3Q8N2H9 469 aa20.2■□□□□ 0.82
HLA-B-250ENST00000434333 TPCN2Q8NHX9 752 aa20.2■□□□□ 0.82
HLA-B-250ENST00000434333 TEKT4Q8WW24 435 aa20.2■□□□□ 0.82
HLA-B-250ENST00000434333 GLMNQ92990 594 aa20.2■□□□□ 0.82
HLA-B-250ENST00000434333 NAT6Q93015 286 aa20.2■□□□□ 0.82
HLA-B-250ENST00000434333 FUBP1Q96AE4 644 aaKnown RBP20.2■□□□□ 0.82
HLA-B-250ENST00000434333 WDR92Q96MX6 357 aa20.2■□□□□ 0.82
HLA-B-250ENST00000434333 ZNF578Q96N58 590 aaPredicted RBP20.2■□□□□ 0.82
HLA-B-250ENST00000434333 PCDH18Q9HCL0 1135 aa20.2■□□□□ 0.82
HLA-B-250ENST00000434333 KLQ9UEF7 1012 aa20.2■□□□□ 0.82
HLA-B-250ENST00000434333 PADI4Q9UM07 663 aa20.2■□□□□ 0.82
HLA-B-250ENST00000434333 BZW2Q9Y6E2 419 aaKnown RBP20.2■□□□□ 0.82
HLA-B-250ENST00000434333 A0A087X0T9 212 aa20.19■□□□□ 0.82
HLA-B-250ENST00000434333 TMEM202A6NGA9 273 aa20.19■□□□□ 0.82
HLA-B-250ENST00000434333 ELFN1P0C7U0 828 aa20.19■□□□□ 0.82
HLA-B-250ENST00000434333 FAM228BP0C875 321 aa20.19■□□□□ 0.82
HLA-B-250ENST00000434333 RENBPP51606 427 aa20.19■□□□□ 0.82
HLA-B-250ENST00000434333 KIAA1024LP59773 190 aa20.19■□□□□ 0.82
HLA-B-250ENST00000434333 TLE3Q04726 772 aa20.19■□□□□ 0.82
HLA-B-250ENST00000434333 CCDC173Q0VFZ6 552 aa20.19■□□□□ 0.82
HLA-B-250ENST00000434333 TCEA2Q15560 299 aa20.19■□□□□ 0.82
HLA-B-250ENST00000434333 LVRNQ6Q4G3 990 aa20.19■□□□□ 0.82
HLA-B-250ENST00000434333 TMCO3Q6UWJ1 677 aa20.19■□□□□ 0.82
HLA-B-250ENST00000434333 RD3Q7Z3Z2 195 aa20.19■□□□□ 0.82
HLA-B-250ENST00000434333 SPACA3Q8IXA5 215 aa20.19■□□□□ 0.82
HLA-B-250ENST00000434333 LSMEM2Q8N112 164 aa20.19■□□□□ 0.82
HLA-B-250ENST00000434333 ARL10Q8N8L6 244 aa20.19■□□□□ 0.82
HLA-B-250ENST00000434333 KYQ8NBH2 561 aa20.19■□□□□ 0.82
HLA-B-250ENST00000434333 OR1E3Q8WZA6 343 aa20.19■□□□□ 0.82
HLA-B-250ENST00000434333 ATXN7L3BQ96GX2 97 aa20.19■□□□□ 0.82
HLA-B-250ENST00000434333 RBM15Q96T37 977 aaKnown RBP eCLIP20.19■□□□□ 0.82
HLA-B-250ENST00000434333 CCDC3Q9BQI4 270 aa20.19■□□□□ 0.82
HLA-B-250ENST00000434333 MGME1Q9BQP7 344 aa20.19■□□□□ 0.82
HLA-B-250ENST00000434333 FGF22Q9HCT0 170 aa20.19■□□□□ 0.82
HLA-B-250ENST00000434333 B4GALT6Q9UBX8 382 aa20.19■□□□□ 0.82
HLA-B-250ENST00000434333 RABGEF1Q9UJ41 708 aa20.19■□□□□ 0.82
HLA-B-250ENST00000434333 SATB2Q9UPW6 733 aa20.19■□□□□ 0.82
HLA-B-250ENST00000434333 DGKBQ9Y6T7 804 aa20.19■□□□□ 0.82
HLA-B-250ENST00000434333 BAHCC1Q9P281 2608 aa20.18■□□□□ 0.82
HLA-B-250ENST00000434333 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.18■□□□□ 0.82
HLA-B-250ENST00000434333 A8MX80 341 aa20.18■□□□□ 0.82
HLA-B-250ENST00000434333 NTN3O00634 580 aaPredicted RBP20.18■□□□□ 0.82
HLA-B-250ENST00000434333 TCEA3O75764 348 aa20.18■□□□□ 0.82
HLA-B-250ENST00000434333 SERPING1P05155 500 aa20.18■□□□□ 0.82
HLA-B-250ENST00000434333 CYP1A2P05177 515 aa20.18■□□□□ 0.82
HLA-B-250ENST00000434333 ALPIP09923 528 aa20.18■□□□□ 0.82
HLA-B-250ENST00000434333 CTSEP14091 401 aa20.18■□□□□ 0.82
HLA-B-250ENST00000434333 IL4RP24394 825 aa20.18■□□□□ 0.82
HLA-B-250ENST00000434333 TRIM23P36406 574 aa20.18■□□□□ 0.82
HLA-B-250ENST00000434333 UBASH3AP57075 661 aa20.18■□□□□ 0.82
HLA-B-250ENST00000434333 POLR2LP62875 67 aaKnown RBP20.18■□□□□ 0.82
HLA-B-250ENST00000434333 ZBED6P86452 979 aa20.18■□□□□ 0.82
HLA-B-250ENST00000434333 ZNF235Q14590 738 aa20.18■□□□□ 0.82
HLA-B-250ENST00000434333 C3orf38Q5JPI3 329 aa20.18■□□□□ 0.82
HLA-B-250ENST00000434333 ESRP1Q6NXG1 681 aaKnown RBP20.18■□□□□ 0.82
HLA-B-250ENST00000434333 IGF2-ASQ6U949 168 aa20.18■□□□□ 0.82
HLA-B-250ENST00000434333 RBM44Q6ZP01 1051 aaKnown RBP20.18■□□□□ 0.82
HLA-B-250ENST00000434333 SDR16C5Q8N3Y7 309 aa20.18■□□□□ 0.82
HLA-B-250ENST00000434333 GRAMD1AQ96CP6 724 aa20.18■□□□□ 0.82
HLA-B-250ENST00000434333 PRR11Q96HE9 360 aaPredicted RBP20.18■□□□□ 0.82
HLA-B-250ENST00000434333 NUDCD1Q96RS6 583 aa20.18■□□□□ 0.82
HLA-B-250ENST00000434333 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.18■□□□□ 0.82
HLA-B-250ENST00000434333 ANAPC7Q9UJX3 599 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms