RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 PEX13Q92968 403 aa19.65■□□□□ 0.74
VRK2-205ENST00000432057 GPR78Q96P69 363 aa19.65■□□□□ 0.74
VRK2-205ENST00000432057 WWP1Q9H0M0 922 aa19.65■□□□□ 0.74
VRK2-205ENST00000432057 SMG9Q9H0W8 520 aaKnown RBP19.65■□□□□ 0.74
VRK2-205ENST00000432057 PNPOQ9NVS9 261 aa19.65■□□□□ 0.74
VRK2-205ENST00000432057 OXSMQ9NWU1 459 aa19.65■□□□□ 0.74
VRK2-205ENST00000432057 HCFC1R1Q9NWW0 138 aa19.65■□□□□ 0.74
VRK2-205ENST00000432057 XPR1Q9UBH6 696 aa19.65■□□□□ 0.74
VRK2-205ENST00000432057 FCF1Q9Y324 198 aaKnown RBP19.65■□□□□ 0.74
VRK2-205ENST00000432057 NOTCH4Q99466 2003 aa19.64■□□□□ 0.74
VRK2-205ENST00000432057 A0A087X1B8 175 aa19.64■□□□□ 0.73
VRK2-205ENST00000432057 FCHO1O14526 889 aa19.64■□□□□ 0.73
VRK2-205ENST00000432057 ATP5HO75947 161 aa19.64■□□□□ 0.73
VRK2-205ENST00000432057 KLHL2O95198 593 aa19.64■□□□□ 0.73
VRK2-205ENST00000432057 CDC25CP30307 473 aa19.64■□□□□ 0.73
VRK2-205ENST00000432057 ZNF140P52738 457 aaPredicted RBP19.64■□□□□ 0.73
VRK2-205ENST00000432057 NSUN2Q08J23 767 aaKnown RBP eCLIP19.64■□□□□ 0.73
VRK2-205ENST00000432057 TRAF2Q12933 501 aa19.64■□□□□ 0.73
VRK2-205ENST00000432057 SEMA3AQ14563 771 aa19.64■□□□□ 0.73
VRK2-205ENST00000432057 HECTD2Q5U5R9 776 aa19.64■□□□□ 0.73
VRK2-205ENST00000432057 DDI1Q8WTU0 396 aa19.64■□□□□ 0.73
VRK2-205ENST00000432057 STYXQ8WUJ0 223 aa19.64■□□□□ 0.73
VRK2-205ENST00000432057 ALG14Q96F25 216 aa19.64■□□□□ 0.73
VRK2-205ENST00000432057 EBF4Q9BQW3 602 aa19.64■□□□□ 0.73
VRK2-205ENST00000432057 EMILIN2Q9BXX0 1053 aa19.64■□□□□ 0.73
VRK2-205ENST00000432057 ASAH2Q9NR71 780 aa19.64■□□□□ 0.73
VRK2-205ENST00000432057 PLK2Q9NYY3 685 aa19.64■□□□□ 0.73
VRK2-205ENST00000432057 PRKAG2Q9UGJ0 569 aa19.64■□□□□ 0.73
VRK2-205ENST00000432057 SCN8AQ9UQD0 1980 aa19.64■□□□□ 0.73
VRK2-205ENST00000432057 CD3EAPO15446 510 aaKnown RBP19.63■□□□□ 0.73
VRK2-205ENST00000432057 TRIM13O60858 407 aa19.63■□□□□ 0.73
VRK2-205ENST00000432057 GLP2RO95838 553 aa19.63■□□□□ 0.73
VRK2-205ENST00000432057 SLC4A1P02730 911 aa19.63■□□□□ 0.73
VRK2-205ENST00000432057 CES1P23141 567 aa19.63■□□□□ 0.73
VRK2-205ENST00000432057 DNAJB1P25685 340 aa19.63■□□□□ 0.73
VRK2-205ENST00000432057 RHOAP61586 193 aa19.63■□□□□ 0.73
VRK2-205ENST00000432057 ELF3P78545 371 aaPredicted RBP19.63■□□□□ 0.73
VRK2-205ENST00000432057 CYB5D1Q6P9G0 228 aa19.63■□□□□ 0.73
VRK2-205ENST00000432057 HTR3DQ70Z44 454 aa19.63■□□□□ 0.73
VRK2-205ENST00000432057 GLT6D1Q7Z4J2 308 aa19.63■□□□□ 0.73
VRK2-205ENST00000432057 LMNTD2Q8IXW0 634 aa19.63■□□□□ 0.73
VRK2-205ENST00000432057 APCDD1Q8J025 514 aa19.63■□□□□ 0.73
VRK2-205ENST00000432057 MDGA1Q8NFP4 955 aa19.63■□□□□ 0.73
VRK2-205ENST00000432057 SP7Q8TDD2 431 aaPredicted RBP19.63■□□□□ 0.73
VRK2-205ENST00000432057 SREK1Q8WXA9 508 aaKnown RBP19.63■□□□□ 0.73
VRK2-205ENST00000432057 GATA5Q9BWX5 397 aaPredicted RBP19.63■□□□□ 0.73
VRK2-205ENST00000432057 NMUR2Q9GZQ4 415 aa19.63■□□□□ 0.73
VRK2-205ENST00000432057 ARHGEF3Q9NR81 526 aa19.63■□□□□ 0.73
VRK2-205ENST00000432057 ARL8BQ9NVJ2 186 aa19.63■□□□□ 0.73
VRK2-205ENST00000432057 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.63■□□□□ 0.73
VRK2-205ENST00000432057 RIMKLBQ9ULI2 386 aa19.63■□□□□ 0.73
VRK2-205ENST00000432057 ARIH1Q9Y4X5 557 aaPredicted RBP19.63■□□□□ 0.73
VRK2-205ENST00000432057 TARM1B6A8C7 271 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 CRTAMO95727 393 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 CCR2P41597 374 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 TSNAXIP1Q2TAA8 658 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 ATXN7L2Q5T6C5 722 aaPredicted RBP19.62■□□□□ 0.73
VRK2-205ENST00000432057 NCEH1Q6PIU2 408 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 WDR75Q8IWA0 830 aaKnown RBP19.62■□□□□ 0.73
VRK2-205ENST00000432057 DCAF4L2Q8NA75 395 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 PDCD6IPQ8WUM4 868 aaKnown RBP19.62■□□□□ 0.73
VRK2-205ENST00000432057 HEXDCQ8WVB3 486 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 RAD9AQ99638 391 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 SLC46A2Q9BY10 475 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 ACSS2Q9NR19 701 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 SAR1AQ9NR31 198 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 IGSF5Q9NSI5 407 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 CATSPERZQ9NTU4 200 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 NLE1Q9NVX2 485 aaPredicted RBP19.62■□□□□ 0.73
VRK2-205ENST00000432057 DNMT3BQ9UBC3 853 aaKnown RBP19.62■□□□□ 0.73
VRK2-205ENST00000432057 TMEM114B3SHH9 223 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 LEFTY2O00292 366 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 TLL1O43897 1013 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 HSPA4LO95757 839 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 MT-CO1P00395 513 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 KRT16P08779 473 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 PRSS56P0CW18 603 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 CSHL1Q14406 222 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 INO80DQ53TQ3 878 aaPredicted RBP19.62■□□□□ 0.73
VRK2-205ENST00000432057 PPM1LQ5SGD2 360 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 LIPMQ5VYY2 423 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 TPGS1Q6ZTW0 290 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 MAVSQ7Z434 540 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 CPXM2Q8N436 756 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 GPR150Q8NGU9 434 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 SLC7A6OSQ96CW6 309 aaPredicted RBP19.62■□□□□ 0.73
VRK2-205ENST00000432057 MOCOSQ96EN8 888 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 LRMDAQ9H2I8 198 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 ARMCX1Q9P291 453 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 CLEC4EQ9ULY5 219 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 ZNF510Q9Y2H8 683 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 CRYL1Q9Y2S2 319 aa19.62■□□□□ 0.73
VRK2-205ENST00000432057 K7ERQ8 282 aa19.61■□□□□ 0.73
VRK2-205ENST00000432057 H2AFYO75367 372 aaKnown RBP19.61■□□□□ 0.73
VRK2-205ENST00000432057 BMPR1AP36894 532 aa19.61■□□□□ 0.73
VRK2-205ENST00000432057 CDKN2DP55273 166 aa19.61■□□□□ 0.73
VRK2-205ENST00000432057 TAF1AQ15573 450 aaPredicted RBP19.61■□□□□ 0.73
VRK2-205ENST00000432057 SPRED2Q7Z698 418 aa19.61■□□□□ 0.73
VRK2-205ENST00000432057 OR4K2Q8NGD2 314 aa19.61■□□□□ 0.73
VRK2-205ENST00000432057 OR4L1Q8NH43 312 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms