RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 SPOCK2Q92563 424 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 IL12RB2Q99665 862 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 MAK16Q9BXY0 300 aaKnown RBP10.8□□□□□ -0.68
ATG4B-210ENST00000428861 PCDHB9Q9Y5E1 797 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 ARID1BQ8NFD5 2236 aaPredicted RBP10.8□□□□□ -0.68
ATG4B-210ENST00000428861 NPIPB15A6NHN6 443 aaPredicted RBP10.79□□□□□ -0.68
ATG4B-210ENST00000428861 FPGTO14772 594 aa10.79□□□□□ -0.68
ATG4B-210ENST00000428861 DFNA5O60443 496 aa10.79□□□□□ -0.68
ATG4B-210ENST00000428861 RECQL5O94762 991 aaPredicted RBP10.79□□□□□ -0.68
ATG4B-210ENST00000428861 CPP00450 1065 aa10.79□□□□□ -0.68
ATG4B-210ENST00000428861 ITGAVP06756 1048 aa10.79□□□□□ -0.68
ATG4B-210ENST00000428861 ALPIP09923 528 aa10.79□□□□□ -0.68
ATG4B-210ENST00000428861 ATXN1LP0C7T5 689 aaKnown RBP10.79□□□□□ -0.68
ATG4B-210ENST00000428861 FTH1P19P0C7X4 201 aa10.79□□□□□ -0.68
ATG4B-210ENST00000428861 CTPS1P17812 591 aa10.79□□□□□ -0.68
ATG4B-210ENST00000428861 CTNNA1P35221 906 aaKnown RBP10.79□□□□□ -0.68
ATG4B-210ENST00000428861 RABIFP47224 123 aa10.79□□□□□ -0.68
ATG4B-210ENST00000428861 PEX5P50542 639 aa10.79□□□□□ -0.68
ATG4B-210ENST00000428861 IFI35P80217 286 aaPredicted RBP10.79□□□□□ -0.68
ATG4B-210ENST00000428861 AP1B1Q10567 949 aa10.79□□□□□ -0.68
ATG4B-210ENST00000428861 FOXC1Q12948 553 aa10.79□□□□□ -0.68
ATG4B-210ENST00000428861 PDE1CQ14123 709 aaPredicted RBP10.79□□□□□ -0.68
ATG4B-210ENST00000428861 SUZ12Q15022 739 aaKnown RBP10.79□□□□□ -0.68
ATG4B-210ENST00000428861 CNGA3Q16281 694 aa10.79□□□□□ -0.68
ATG4B-210ENST00000428861 RALGPS1Q5JS13 557 aa10.79□□□□□ -0.68
ATG4B-210ENST00000428861 ERAP2Q6P179 960 aa10.79□□□□□ -0.68
ATG4B-210ENST00000428861 NT5DC3Q86UY8 548 aa10.79□□□□□ -0.68
ATG4B-210ENST00000428861 ZSCAN30Q86W11 494 aa10.79□□□□□ -0.68
ATG4B-210ENST00000428861 CBARPQ8N350 705 aaPredicted RBP10.79□□□□□ -0.68
ATG4B-210ENST00000428861 BBS5Q8N3I7 341 aa10.79□□□□□ -0.68
ATG4B-210ENST00000428861 EID2Q8N6I1 236 aa10.79□□□□□ -0.68
ATG4B-210ENST00000428861 ALG3Q92685 438 aa10.79□□□□□ -0.68
ATG4B-210ENST00000428861 HAUS1Q96CS2 278 aa10.79□□□□□ -0.68
ATG4B-210ENST00000428861 HEMGNQ9BXL5 484 aa10.79□□□□□ -0.68
ATG4B-210ENST00000428861 POLR1EQ9GZS1 481 aaKnown RBP10.79□□□□□ -0.68
ATG4B-210ENST00000428861 TCEAL2Q9H3H9 227 aaPredicted RBP10.79□□□□□ -0.68
ATG4B-210ENST00000428861 LUC7LQ9NQ29 371 aaKnown RBP10.79□□□□□ -0.68
ATG4B-210ENST00000428861 PACSIN2Q9UNF0 486 aaPredicted RBP10.79□□□□□ -0.68
ATG4B-210ENST00000428861 CHKBQ9Y259 395 aa10.79□□□□□ -0.68
ATG4B-210ENST00000428861 TTLL3Q9Y4R7 772 aa10.79□□□□□ -0.68
ATG4B-210ENST00000428861 PCDHA3Q9Y5H8 950 aa10.79□□□□□ -0.68
ATG4B-210ENST00000428861 SPTY2D1-AS1A0A0U1RR47 76 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 MACROD2A1Z1Q3 448 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 K7ESM1 405 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 TRIM38O00635 465 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 LZTS3O60299 673 aaPredicted RBP10.78□□□□□ -0.68
ATG4B-210ENST00000428861 MAGEC1O60732 1142 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 PIAS2O75928 621 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 DKK1O94907 266 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 HEXIM1O94992 359 aaKnown RBP10.78□□□□□ -0.68
ATG4B-210ENST00000428861 ZRANB2O95218 330 aaKnown RBP eCLIP10.78□□□□□ -0.68
ATG4B-210ENST00000428861 IPO7O95373 1038 aaKnown RBP10.78□□□□□ -0.68
ATG4B-210ENST00000428861 PCCBP05166 539 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 ZFXP17010 805 aaPredicted RBP10.78□□□□□ -0.68
ATG4B-210ENST00000428861 DGKAP23743 735 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 PTPN3P26045 913 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 CTNNA2P26232 953 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 CD86P42081 329 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 GRK6P43250 576 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 ARRB1P49407 418 aaPredicted RBP10.78□□□□□ -0.68
ATG4B-210ENST00000428861 NAP1L1P55209 391 aaKnown RBP10.78□□□□□ -0.68
ATG4B-210ENST00000428861 POLR2LP62875 67 aaKnown RBP10.78□□□□□ -0.68
ATG4B-210ENST00000428861 SKOR1P84550 965 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 WASHC5Q12768 1159 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 DNAJC3Q13217 504 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 INPP5AQ14642 412 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 LRRC14Q15048 493 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 AGERQ15109 404 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 PDK1Q15118 436 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 PRKD1Q15139 912 aaPredicted RBP10.78□□□□□ -0.68
ATG4B-210ENST00000428861 TFDP3Q5H9I0 405 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 ARMC12Q5T9G4 340 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 HSD11B1LQ7Z5J1 315 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 GLRX5Q86SX6 157 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 KIAA1328Q86T90 577 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 RCOR2Q8IZ40 523 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 RBFAQ8N0V3 343 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 OXR1Q8N573 874 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 EXD1Q8NHP7 514 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 COQ10AQ96MF6 247 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 AGAP3Q96P47 875 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 MCCC1Q96RQ3 725 aaPredicted RBP10.78□□□□□ -0.68
ATG4B-210ENST00000428861 TDRD1Q9BXT4 1180 aaKnown RBP10.78□□□□□ -0.68
ATG4B-210ENST00000428861 BRD8Q9H0E9 1235 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 C10orf88Q9H8K7 445 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 DNAJC28Q9NX36 388 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 SEPT10Q9P0V9 454 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 PHTF1Q9UMS5 762 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 PPIL1Q9Y3C6 166 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 OR1A2Q9Y585 309 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 ADGRG1Q9Y653 693 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 CAPN6Q9Y6Q1 641 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 WDFY3Q8IZQ1 3526 aa10.78□□□□□ -0.68
ATG4B-210ENST00000428861 A0A0J9YYE9 177 aa10.77□□□□□ -0.69
ATG4B-210ENST00000428861 CFAP69A5D8W1 941 aa10.77□□□□□ -0.69
ATG4B-210ENST00000428861 YKT6O15498 198 aa10.77□□□□□ -0.69
ATG4B-210ENST00000428861 DDX3YO15523 660 aaKnown RBP10.77□□□□□ -0.69
ATG4B-210ENST00000428861 HYAL3O43820 417 aaPredicted RBP10.77□□□□□ -0.69
ATG4B-210ENST00000428861 NEBLO76041 1014 aa10.77□□□□□ -0.69
ATG4B-210ENST00000428861 TRBC1P01850 177 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms