RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 PON2Q15165 354 aa7.27□□□□□ -1.25
CNOT4-206ENST00000428680 NTRK3Q16288 839 aa7.27□□□□□ -1.25
CNOT4-206ENST00000428680 LONRF1Q17RB8 773 aa7.27□□□□□ -1.25
CNOT4-206ENST00000428680 TMEM119Q4V9L6 283 aa7.27□□□□□ -1.25
CNOT4-206ENST00000428680 ASTLQ6HA08 431 aaPredicted RBP7.27□□□□□ -1.25
CNOT4-206ENST00000428680 KLHL24Q6TFL4 600 aa7.27□□□□□ -1.25
CNOT4-206ENST00000428680 PACS1Q6VY07 963 aa7.27□□□□□ -1.25
CNOT4-206ENST00000428680 LRRC6Q86X45 466 aa7.27□□□□□ -1.25
CNOT4-206ENST00000428680 SPPL3Q8TCT6 385 aa7.27□□□□□ -1.25
CNOT4-206ENST00000428680 DENND1AQ8TEH3 1009 aa7.27□□□□□ -1.25
CNOT4-206ENST00000428680 TBL1YQ9BQ87 522 aa7.27□□□□□ -1.25
CNOT4-206ENST00000428680 NDC1Q9BTX1 674 aa7.27□□□□□ -1.25
CNOT4-206ENST00000428680 TUBB6Q9BUF5 446 aa7.27□□□□□ -1.25
CNOT4-206ENST00000428680 PITPNM3Q9BZ71 974 aa7.27□□□□□ -1.25
CNOT4-206ENST00000428680 SLC39A8Q9C0K1 460 aa7.27□□□□□ -1.25
CNOT4-206ENST00000428680 YY1AP1Q9H869 796 aa7.27□□□□□ -1.25
CNOT4-206ENST00000428680 RC3H2Q9HBD1 1191 aaKnown RBP7.27□□□□□ -1.25
CNOT4-206ENST00000428680 CATSPERZQ9NTU4 200 aa7.27□□□□□ -1.25
CNOT4-206ENST00000428680 ANAPC2Q9UJX6 822 aa7.27□□□□□ -1.25
CNOT4-206ENST00000428680 GRID1Q9ULK0 1009 aa7.27□□□□□ -1.25
CNOT4-206ENST00000428680 L1RE1Q9UN81 338 aa7.27□□□□□ -1.25
CNOT4-206ENST00000428680 MYO7AQ13402 2215 aa7.27□□□□□ -1.25
CNOT4-206ENST00000428680 A8MUI8 341 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 ERAL1O75616 437 aaKnown RBP7.26□□□□□ -1.25
CNOT4-206ENST00000428680 SLC25A12O75746 678 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 KRT16P08779 473 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 CMPK1P30085 196 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 AP1S1P61966 158 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 DSC3Q14574 896 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 NR6A1Q15406 480 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 TRIP4Q15650 581 aaPredicted RBP7.26□□□□□ -1.25
CNOT4-206ENST00000428680 ZACNQ401N2 412 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 CCDC38Q502W7 563 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 BEND6Q5SZJ8 279 aaPredicted RBP7.26□□□□□ -1.25
CNOT4-206ENST00000428680 HECTD2Q5U5R9 776 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 HIBCHQ6NVY1 386 aaPredicted RBP7.26□□□□□ -1.25
CNOT4-206ENST00000428680 TRAF7Q6Q0C0 670 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 COMMD2Q86X83 199 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 SYNPOQ8N3V7 929 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 TXNDC5Q8NBS9 432 aaKnown RBP7.26□□□□□ -1.25
CNOT4-206ENST00000428680 ZFP28Q8NHY6 868 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 DQX1Q8TE96 717 aaKnown RBP7.26□□□□□ -1.25
CNOT4-206ENST00000428680 HGH1Q9BTY7 390 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 MRPL46Q9H2W6 279 aaKnown RBP7.26□□□□□ -1.25
CNOT4-206ENST00000428680 LDAHQ9H6V9 325 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 RMND5AQ9H871 391 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 OPTCQ9UBM4 332 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 COPS7AQ9UBW8 275 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 HCN2Q9UL51 889 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 NAALADL1Q9UQQ1 740 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 RNF103-CHMP3A0A140T963 221 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 BTN3A1O00481 513 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 CES2O00748 559 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 IRAK2O43187 625 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 WFS1O76024 890 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 HIST1H2ABP04908 130 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 ERCC2P18074 760 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 RFC1P35251 1148 aaPredicted RBP7.26□□□□□ -1.25
CNOT4-206ENST00000428680 AVPR1BP47901 424 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 KCNJ1P48048 391 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 SLC12A3P55017 1021 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 HNRNPKP61978 463 aaKnown RBP eCLIP7.26□□□□□ -1.255e-7■□□□□ 10.3
CNOT4-206ENST00000428680 C15orf59Q2T9L4 293 aaPredicted RBP7.26□□□□□ -1.25
CNOT4-206ENST00000428680 ADGRF1Q5T601 910 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 FAM151BQ6UXP7 276 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 HIST3H2AQ7L7L0 130 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 VN1R5Q7Z5H4 357 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 ZNF398Q8TD17 642 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 CYB5D2Q8WUJ1 264 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 IRGQQ8WZA9 623 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 HAS1Q92839 578 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 HIST1H2ACQ93077 130 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 LPIN3Q9BQK8 851 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 THUMPD3Q9BV44 507 aaKnown RBP7.26□□□□□ -1.25
CNOT4-206ENST00000428680 DPY30Q9C005 99 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 MAGEH1Q9H213 219 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 SERTAD3Q9UJW9 196 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 HEBP2Q9Y5Z4 205 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 TMEM150CB9EJG8 249 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 F8VZ95 297 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 LDB2O43679 373 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 SGTAO43765 313 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 KLHL41O60662 606 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 DRD1P21728 446 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 NDUFS1P28331 727 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 CDC25BP30305 580 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 NTSR1P30989 418 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 ARL2P36404 184 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 PMS2P54278 862 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 GNGT1P63211 74 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 PLOD1Q02809 727 aaPredicted RBP7.26□□□□□ -1.25
CNOT4-206ENST00000428680 PWP1Q13610 501 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 GALNTL6Q49A17 601 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 SPOCD1Q6ZMY3 1216 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 USP53Q70EK8 1073 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 MCOLN2Q8IZK6 566 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 SLC39A11Q8N1S5 342 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 PCYOX1LQ8NBM8 494 aa7.26□□□□□ -1.25
CNOT4-206ENST00000428680 SRFBP1Q8NEF9 429 aaKnown RBP7.26□□□□□ -1.25
CNOT4-206ENST00000428680 NMUR1Q9HB89 426 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms