RNA–Protein interactions for RNA: ENST00000428634.1

PEX11B-202, Transcript of peroxisomal biogenesis factor 11 beta, humanhuman

TSL 2

Gene PEX11B, Length 667 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11B-202ENST00000428634 CASC4Q6P4E1 433 aa12.15□□□□□ -0.46
PEX11B-202ENST00000428634 MAMSTRQ6ZN01 415 aa12.15□□□□□ -0.46
PEX11B-202ENST00000428634 PARS2Q7L3T8 475 aaKnown RBP12.15□□□□□ -0.46
PEX11B-202ENST00000428634 GLT6D1Q7Z4J2 308 aa12.15□□□□□ -0.46
PEX11B-202ENST00000428634 KBTBD6Q86V97 674 aa12.15□□□□□ -0.46
PEX11B-202ENST00000428634 ZSWIM9Q86XI8 627 aa12.15□□□□□ -0.46
PEX11B-202ENST00000428634 CACUL1Q86Y37 369 aa12.15□□□□□ -0.46
PEX11B-202ENST00000428634 CCNJLQ8IV13 435 aa12.15□□□□□ -0.46
PEX11B-202ENST00000428634 HDDC3Q8N4P3 179 aa12.15□□□□□ -0.46
PEX11B-202ENST00000428634 PPHLN1Q8NEY8 458 aaKnown RBP12.15□□□□□ -0.46
PEX11B-202ENST00000428634 BRSK1Q8TDC3 778 aa12.15□□□□□ -0.46
PEX11B-202ENST00000428634 BLOC1S5Q8TDH9 187 aa12.15□□□□□ -0.46
PEX11B-202ENST00000428634 PTCD2Q8WV60 388 aaKnown RBP12.15□□□□□ -0.46
PEX11B-202ENST00000428634 HMGB4Q8WW32 186 aa12.15□□□□□ -0.46
PEX11B-202ENST00000428634 VOPP1Q96AW1 172 aa12.15□□□□□ -0.46
PEX11B-202ENST00000428634 SCRN2Q96FV2 425 aa12.15□□□□□ -0.46
PEX11B-202ENST00000428634 MRGPRX1Q96LB2 322 aa12.15□□□□□ -0.46
PEX11B-202ENST00000428634 NAT9Q9BTE0 207 aa12.15□□□□□ -0.46
PEX11B-202ENST00000428634 NEUROG2Q9H2A3 272 aa12.15□□□□□ -0.46
PEX11B-202ENST00000428634 CD248Q9HCU0 757 aa12.15□□□□□ -0.46
PEX11B-202ENST00000428634 SAYSD1Q9NPB0 183 aa12.15□□□□□ -0.46
PEX11B-202ENST00000428634 PIH1D1Q9NWS0 290 aaKnown RBP12.15□□□□□ -0.46
PEX11B-202ENST00000428634 FBXL12Q9NXK8 326 aa12.15□□□□□ -0.46
PEX11B-202ENST00000428634 MAD1L1Q9Y6D9 718 aa12.15□□□□□ -0.46
PEX11B-202ENST00000428634 ATG2BQ96BY7 2078 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 A0A1W2PP55 124 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 CAPN8A6NHC0 703 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 C2orf81A6NN90 581 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 NEMP1O14524 444 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 SLC7A4O43246 635 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 AVILO75366 819 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 RNASEH2AO75792 299 aaKnown RBP12.14□□□□□ -0.47
PEX11B-202ENST00000428634 APBB3O95704 486 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 PDGFBP01127 241 aaPredicted RBP12.14□□□□□ -0.47
PEX11B-202ENST00000428634 C7P10643 843 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 ZNF30P17039 623 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 GABRG2P18507 467 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 NDUFV2P19404 249 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 VIPR1P32241 457 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 HNF1BP35680 557 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 P2RY2P41231 377 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 ABL2P42684 1182 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 CXCL12P48061 93 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 CNTN1Q12860 1018 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 MTAPQ13126 283 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 CBLBQ13191 982 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 SEPT6Q14141 434 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 POU6F1Q14863 301 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 BRD3Q15059 726 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 TAF1AQ15573 450 aaPredicted RBP12.14□□□□□ -0.47
PEX11B-202ENST00000428634 CCDC38Q502W7 563 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 CERCAMQ5T4B2 595 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 DENND2CQ68D51 928 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.14□□□□□ -0.47
PEX11B-202ENST00000428634 USP30Q70CQ3 517 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 NLRP9Q7RTR0 991 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 ZBED8Q8IZ13 594 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 CAMKK1Q8N5S9 505 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 STAMBPL1Q96FJ0 436 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 MCCC1Q96RQ3 725 aaPredicted RBP12.14□□□□□ -0.47
PEX11B-202ENST00000428634 RANBP9Q96S59 729 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 LYSMD1Q96S90 227 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 GPR63Q9BZJ6 419 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 MRM3Q9HC36 420 aaKnown RBP12.14□□□□□ -0.47
PEX11B-202ENST00000428634 PCDH12Q9NPG4 1184 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 ARGLU1Q9NWB6 273 aaPredicted RBP12.14□□□□□ -0.47
PEX11B-202ENST00000428634 SYBUQ9NX95 663 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.14□□□□□ -0.47
PEX11B-202ENST00000428634 FZD4Q9ULV1 537 aa12.14□□□□□ -0.47
PEX11B-202ENST00000428634 CKAP5Q14008 2032 aa12.13□□□□□ -0.47
PEX11B-202ENST00000428634 UQCRHLA0A096LP55 91 aa12.13□□□□□ -0.47
PEX11B-202ENST00000428634 C1orf232A0A0U1RR37 186 aa12.13□□□□□ -0.47
PEX11B-202ENST00000428634 AP1G1O43747 822 aa12.13□□□□□ -0.47
PEX11B-202ENST00000428634 ZNF217O75362 1048 aa12.13□□□□□ -0.47
PEX11B-202ENST00000428634 TTC4O95801 387 aa12.13□□□□□ -0.47
PEX11B-202ENST00000428634 UQCRHP07919 91 aa12.13□□□□□ -0.47
PEX11B-202ENST00000428634 ALPIP09923 528 aa12.13□□□□□ -0.47
PEX11B-202ENST00000428634 PIRTP0C851 137 aa12.13□□□□□ -0.47
PEX11B-202ENST00000428634 PGAM1P18669 254 aa12.13□□□□□ -0.47
PEX11B-202ENST00000428634 DRD3P35462 400 aa12.13□□□□□ -0.47
PEX11B-202ENST00000428634 MAGEA4P43358 317 aa12.13□□□□□ -0.47
PEX11B-202ENST00000428634 MTM1Q13496 603 aa12.13□□□□□ -0.47
PEX11B-202ENST00000428634 ANO7Q6IWH7 933 aa12.13□□□□□ -0.47
PEX11B-202ENST00000428634 EMBQ6PCB8 327 aa12.13□□□□□ -0.47
PEX11B-202ENST00000428634 DPPA4Q7L190 304 aa12.13□□□□□ -0.47
PEX11B-202ENST00000428634 PALM2Q8IXS6 379 aa12.13□□□□□ -0.47
PEX11B-202ENST00000428634 GSPT2Q8IYD1 628 aaKnown RBP12.13□□□□□ -0.47
PEX11B-202ENST00000428634 AADATQ8N5Z0 425 aa12.13□□□□□ -0.47
PEX11B-202ENST00000428634 PYROXD1Q8WU10 500 aa12.13□□□□□ -0.47
PEX11B-202ENST00000428634 PBXIP1Q96AQ6 731 aa12.13□□□□□ -0.47
PEX11B-202ENST00000428634 SIGLEC10Q96LC7 697 aa12.13□□□□□ -0.47
PEX11B-202ENST00000428634 PWWP2AQ96N64 755 aa12.13□□□□□ -0.47
PEX11B-202ENST00000428634 HHIPQ96QV1 700 aa12.13□□□□□ -0.47
PEX11B-202ENST00000428634 EBNA1BP2Q99848 306 aaKnown RBP12.13□□□□□ -0.47
PEX11B-202ENST00000428634 SLC6A17Q9H1V8 727 aa12.13□□□□□ -0.47
PEX11B-202ENST00000428634 ZFYVE1Q9HBF4 777 aa12.13□□□□□ -0.47
PEX11B-202ENST00000428634 POLR3BQ9NW08 1133 aaPredicted RBP12.13□□□□□ -0.47
PEX11B-202ENST00000428634 SPATA6Q9NWH7 488 aaPredicted RBP12.13□□□□□ -0.47
PEX11B-202ENST00000428634 B4GALT6Q9UBX8 382 aa12.13□□□□□ -0.47
PEX11B-202ENST00000428634 SOX13Q9UN79 622 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms