RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 DNAJC24Q6P3W2 148 aa16.65■□□□□ 0.26
VARS-216ENST00000428445 LVRNQ6Q4G3 990 aa16.65■□□□□ 0.26
VARS-216ENST00000428445 TAF8Q7Z7C8 310 aa16.65■□□□□ 0.26
VARS-216ENST00000428445 TP53INP2Q8IXH6 220 aa16.65■□□□□ 0.26
VARS-216ENST00000428445 UMODL1-AS1Q8N2C9 162 aa16.65■□□□□ 0.26
VARS-216ENST00000428445 FAM46DQ8NEK8 389 aa16.65■□□□□ 0.26
VARS-216ENST00000428445 GPR156Q8NFN8 814 aa16.65■□□□□ 0.26
VARS-216ENST00000428445 WDR48Q8TAF3 677 aa16.65■□□□□ 0.26
VARS-216ENST00000428445 ENOX1Q8TC92 643 aaKnown RBP16.65■□□□□ 0.26
VARS-216ENST00000428445 PCMTD1Q96MG8 357 aaPredicted RBP16.65■□□□□ 0.26
VARS-216ENST00000428445 WDR92Q96MX6 357 aa16.65■□□□□ 0.26
VARS-216ENST00000428445 LGR4Q9BXB1 951 aa16.65■□□□□ 0.26
VARS-216ENST00000428445 TMEM168Q9H0V1 697 aa16.65■□□□□ 0.26
VARS-216ENST00000428445 SUDS3Q9H7L9 328 aaPredicted RBP16.65■□□□□ 0.26
VARS-216ENST00000428445 CATSPERBQ9H7T0 1116 aa16.65■□□□□ 0.26
VARS-216ENST00000428445 FGF22Q9HCT0 170 aa16.65■□□□□ 0.26
VARS-216ENST00000428445 FANCLQ9NW38 375 aa16.65■□□□□ 0.26
VARS-216ENST00000428445 RNF215Q9Y6U7 377 aa16.65■□□□□ 0.26
VARS-216ENST00000428445 BOD1L1Q8NFC6 3051 aa16.65■□□□□ 0.26
VARS-216ENST00000428445 B4DGG1 531 aa16.64■□□□□ 0.25
VARS-216ENST00000428445 RECQL5O94762 991 aaPredicted RBP16.64■□□□□ 0.25
VARS-216ENST00000428445 CALB1P05937 261 aa16.64■□□□□ 0.25
VARS-216ENST00000428445 TPM2P07951 284 aa16.64■□□□□ 0.25
VARS-216ENST00000428445 GM2AP17900 193 aa16.64■□□□□ 0.25
VARS-216ENST00000428445 MMP12P39900 470 aa16.64■□□□□ 0.25
VARS-216ENST00000428445 NFATC3Q12968 1075 aa16.64■□□□□ 0.25
VARS-216ENST00000428445 PPP1R15BQ5SWA1 713 aa16.64■□□□□ 0.25
VARS-216ENST00000428445 CFAP58Q5T655 872 aa16.64■□□□□ 0.25
VARS-216ENST00000428445 SRLQ86TD4 932 aa16.64■□□□□ 0.25
VARS-216ENST00000428445 VASH2Q86V25 355 aa16.64■□□□□ 0.25
VARS-216ENST00000428445 ZFAND4Q86XD8 727 aa16.64■□□□□ 0.25
VARS-216ENST00000428445 CCNJLQ8IV13 435 aa16.64■□□□□ 0.25
VARS-216ENST00000428445 EXTL1Q92935 676 aa16.64■□□□□ 0.25
VARS-216ENST00000428445 RBM15Q96T37 977 aaKnown RBP eCLIP16.64■□□□□ 0.25
VARS-216ENST00000428445 AGPAT1Q99943 283 aa16.64■□□□□ 0.25
VARS-216ENST00000428445 TRIM4Q9C037 500 aa16.64■□□□□ 0.25
VARS-216ENST00000428445 TAS2R14Q9NYV8 317 aa16.64■□□□□ 0.25
VARS-216ENST00000428445 MOSPD1Q9UJG1 213 aa16.64■□□□□ 0.25
VARS-216ENST00000428445 ATP8A1Q9Y2Q0 1164 aa16.64■□□□□ 0.25
VARS-216ENST00000428445 LOXL2Q9Y4K0 774 aa16.64■□□□□ 0.25
VARS-216ENST00000428445 BSNQ9UPA5 3926 aa16.64■□□□□ 0.25
VARS-216ENST00000428445 MYO18BQ8IUG5 2567 aa16.63■□□□□ 0.25
VARS-216ENST00000428445 PRAMEF33A0A0G2JMD5 474 aa16.63■□□□□ 0.25
VARS-216ENST00000428445 TEX33O43247 280 aa16.63■□□□□ 0.25
VARS-216ENST00000428445 PRAMEF10O60809 474 aa16.63■□□□□ 0.25
VARS-216ENST00000428445 PRAMEF11O60813 436 aa16.63■□□□□ 0.25
VARS-216ENST00000428445 JMJD7P0C870 316 aa16.63■□□□□ 0.25
VARS-216ENST00000428445 WT1P19544 449 aaPredicted RBP16.63■□□□□ 0.25
VARS-216ENST00000428445 COPB1P53618 953 aaKnown RBP16.63■□□□□ 0.25
VARS-216ENST00000428445 TPI1P60174 286 aa16.63■□□□□ 0.25
VARS-216ENST00000428445 CYP4F2P78329 520 aa16.63■□□□□ 0.25
VARS-216ENST00000428445 MTM1Q13496 603 aa16.63■□□□□ 0.25
VARS-216ENST00000428445 FKBP15Q5T1M5 1219 aa16.63■□□□□ 0.25
VARS-216ENST00000428445 ERAP2Q6P179 960 aa16.63■□□□□ 0.25
VARS-216ENST00000428445 LIPIQ6XZB0 460 aa16.63■□□□□ 0.25
VARS-216ENST00000428445 PRICKLE2Q7Z3G6 844 aa16.63■□□□□ 0.25
VARS-216ENST00000428445 ARFGAP1Q8N6T3 406 aa16.63■□□□□ 0.25
VARS-216ENST00000428445 OR56A4Q8NGH8 313 aa16.63■□□□□ 0.25
VARS-216ENST00000428445 HCAR2Q8TDS4 363 aa16.63■□□□□ 0.25
VARS-216ENST00000428445 ZNF641Q96N77 438 aaPredicted RBP16.63■□□□□ 0.25
VARS-216ENST00000428445 STRADBQ9C0K7 418 aa16.63■□□□□ 0.25
VARS-216ENST00000428445 SEMA6CQ9H3T2 930 aa16.63■□□□□ 0.25
VARS-216ENST00000428445 CYP4F12Q9HCS2 524 aa16.63■□□□□ 0.25
VARS-216ENST00000428445 FOXJ2Q9P0K8 574 aa16.63■□□□□ 0.25
VARS-216ENST00000428445 LRIT1Q9P2V4 623 aa16.63■□□□□ 0.25
VARS-216ENST00000428445 PCSK1NQ9UHG2 260 aa16.63■□□□□ 0.25
VARS-216ENST00000428445 TMCO5BA8MYB1 307 aa16.62■□□□□ 0.25
VARS-216ENST00000428445 ATMINO43313 823 aaPredicted RBP16.62■□□□□ 0.25
VARS-216ENST00000428445 PALMO75781 387 aa16.62■□□□□ 0.25
VARS-216ENST00000428445 CCKBRP32239 447 aa16.62■□□□□ 0.25
VARS-216ENST00000428445 MAPK10P53779 464 aa16.62■□□□□ 0.25
VARS-216ENST00000428445 ZFP36L1Q07352 338 aaKnown RBP16.62■□□□□ 0.25
VARS-216ENST00000428445 PTPRRQ15256 657 aa16.62■□□□□ 0.25
VARS-216ENST00000428445 OGFOD3Q6PK18 319 aa16.62■□□□□ 0.25
VARS-216ENST00000428445 USP53Q70EK8 1073 aa16.62■□□□□ 0.25
VARS-216ENST00000428445 NEK11Q8NG66 645 aa16.62■□□□□ 0.25
VARS-216ENST00000428445 PTCD2Q8WV60 388 aaKnown RBP16.62■□□□□ 0.25
VARS-216ENST00000428445 JPH3Q8WXH2 748 aaPredicted RBP16.62■□□□□ 0.25
VARS-216ENST00000428445 USP7Q93009 1102 aa16.62■□□□□ 0.25
VARS-216ENST00000428445 PEBP4Q96S96 227 aa16.62■□□□□ 0.25
VARS-216ENST00000428445 CNPY3Q9BT09 278 aa16.62■□□□□ 0.25
VARS-216ENST00000428445 DPEP2Q9H4A9 486 aa16.62■□□□□ 0.25
VARS-216ENST00000428445 DHX35Q9H5Z1 703 aaKnown RBP16.62■□□□□ 0.25
VARS-216ENST00000428445 RDH14Q9HBH5 336 aa16.62■□□□□ 0.25
VARS-216ENST00000428445 PCDHGA7Q9Y5G6 932 aa16.62■□□□□ 0.25
VARS-216ENST00000428445 DGKBQ9Y6T7 804 aa16.62■□□□□ 0.25
VARS-216ENST00000428445 DFFAO00273 331 aa16.61■□□□□ 0.25
VARS-216ENST00000428445 B4GAT1O43505 415 aa16.61■□□□□ 0.25
VARS-216ENST00000428445 FUCA1P04066 466 aa16.61■□□□□ 0.25
VARS-216ENST00000428445 GLB1P16278 677 aa16.61■□□□□ 0.25
VARS-216ENST00000428445 MLLT3P42568 568 aaPredicted RBP16.61■□□□□ 0.25
VARS-216ENST00000428445 SUOXP51687 545 aa16.61■□□□□ 0.25
VARS-216ENST00000428445 NDST2P52849 883 aa16.61■□□□□ 0.25
VARS-216ENST00000428445 MAZP56270 477 aaKnown RBP16.61■□□□□ 0.25
VARS-216ENST00000428445 KCNC4Q03721 635 aa16.61■□□□□ 0.25
VARS-216ENST00000428445 AGERQ15109 404 aa16.61■□□□□ 0.25
VARS-216ENST00000428445 CERCAMQ5T4B2 595 aa16.61■□□□□ 0.25
VARS-216ENST00000428445 SPECC1LQ69YQ0 1117 aa16.61■□□□□ 0.25
VARS-216ENST00000428445 ACAD10Q6JQN1 1059 aa16.61■□□□□ 0.25
VARS-216ENST00000428445 DCUN1D2Q6PH85 259 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms