RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 RNF31Q96EP0 1072 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 CSPG4P5Q96PW8 444 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 RNF39Q9H2S5 420 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 CYLDQ9NQC7 956 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 GKN1Q9NS71 199 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 ABCB8Q9NUT2 735 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 CDK14O94921 469 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 RPL14P50914 215 aaKnown RBP9.76□□□□□ -0.85
SNX13-203ENST00000428135 RAB10P61026 200 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 NCF4Q15080 339 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 PCBP1Q15365 356 aaKnown RBP eCLIP9.76□□□□□ -0.85
SNX13-203ENST00000428135 CHST15Q7LFX5 561 aaPredicted RBP9.76□□□□□ -0.85
SNX13-203ENST00000428135 C16orf62Q7Z3J2 963 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 TMCO2Q7Z6W1 182 aaPredicted RBP9.76□□□□□ -0.85
SNX13-203ENST00000428135 PHYKPLQ8IUZ5 450 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 DQX1Q8TE96 717 aaKnown RBP9.76□□□□□ -0.85
SNX13-203ENST00000428135 APBB2Q92870 758 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 AARSD1Q9BTE6 412 aaKnown RBP9.76□□□□□ -0.85
SNX13-203ENST00000428135 PHACTR1Q9C0D0 580 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 ATG10Q9H0Y0 220 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 XPR1Q9UBH6 696 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 LRRC14BA6NHZ5 514 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 FAM25AB3EWG3 89 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 FAM25CB3EWG5 89 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 FAM25GB3EWG6 89 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 B4GALT4O60513 344 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 SCN2BO60939 215 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 MT-CYBP00156 380 aaPredicted RBP9.76□□□□□ -0.85
SNX13-203ENST00000428135 PCYT1AP49585 367 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 NEK3P51956 506 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 MRPS22P82650 360 aaKnown RBP9.76□□□□□ -0.85
SNX13-203ENST00000428135 ITIH4Q14624 930 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 R3HCC1LQ7Z5L2 792 aaKnown RBP9.76□□□□□ -0.85
SNX13-203ENST00000428135 ZNF557Q8N988 423 aaPredicted RBP9.76□□□□□ -0.85
SNX13-203ENST00000428135 CYB5D2Q8WUJ1 264 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 PYDC1Q8WXC3 89 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 HBEGFQ99075 208 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 GEMIN8Q9NWZ8 242 aaKnown RBP9.76□□□□□ -0.85
SNX13-203ENST00000428135 ADPRHL2Q9NX46 363 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 SLC27A6Q9Y2P4 619 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 AKAP12Q02952 1782 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 A0A1W2PPM1 405 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 HCRTO43612 131 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 KCNH1O95259 989 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 PTPN2P17706 415 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 ADRA1BP35368 520 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 AMZ1Q400G9 498 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 TAC4Q86UU9 113 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 HID1Q8IV36 788 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 C10orf107Q8IVU9 208 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 EID3Q8N140 333 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 MCMBPQ9BTE3 642 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 ADI1Q9BV57 179 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 SMG9Q9H0W8 520 aaKnown RBP9.76□□□□□ -0.85
SNX13-203ENST00000428135 C12orf65Q9H3J6 166 aaKnown RBP9.76□□□□□ -0.85
SNX13-203ENST00000428135 GDF3Q9NR23 364 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 TCRBV7S2A1N4TA0A589 114 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 SLC38A8A6NNN8 435 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 GTPBP1O00178 669 aaKnown RBP9.75□□□□□ -0.85
SNX13-203ENST00000428135 SNHG28P0DPA3 235 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 FASP25445 335 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 MSX2P35548 267 aaPredicted RBP9.75□□□□□ -0.85
SNX13-203ENST00000428135 NEDD8Q15843 81 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 ZIK1Q3SY52 487 aaPredicted RBP9.75□□□□□ -0.85
SNX13-203ENST00000428135 VITQ6UXI7 678 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 NKAPQ8N5F7 415 aaKnown RBP9.75□□□□□ -0.85
SNX13-203ENST00000428135 WDR36Q8NI36 951 aaKnown RBP9.75□□□□□ -0.85
SNX13-203ENST00000428135 HMGB4Q8WW32 186 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 HERVK_113Q902F9 699 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 TFAP2BQ92481 460 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 OSBPL2Q9H1P3 480 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 RAD21L1Q9H4I0 556 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 ERVK-5Q9HDB9 667 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 HMGXB4Q9UGU5 601 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 ATXN2Q99700 1313 aaKnown RBP9.75□□□□□ -0.85
SNX13-203ENST00000428135 NRP1O14786 923 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 DLGAP3O95886 979 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 ITGA2BP08514 1039 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 NR2F1P10589 423 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 EPHA3P29320 983 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 PRKCIP41743 596 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 ATP12AP54707 1039 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 NRLP54845 237 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 COPZ1P61923 177 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 SLC25A3Q00325 362 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 RGS1Q08116 209 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 ZNHIT3Q15649 155 aaPredicted RBP9.75□□□□□ -0.85
SNX13-203ENST00000428135 TIGD5Q53EQ6 642 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 OR8H2Q8N162 312 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 SNX27Q96L92 541 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 CHRAC1Q9NRG0 131 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 FBXO5Q9UKT4 447 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 R3HDM2Q9Y2K5 976 aaKnown RBP9.75□□□□□ -0.85
SNX13-203ENST00000428135 GLYATL1P3A0A0U1RQE8 302 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 C2orf71A6NGG8 1288 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.75□□□□□ -0.85
SNX13-203ENST00000428135 ULK1O75385 1050 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 NFATC1O95644 943 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 CFIP05156 583 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 SLC10A3P09131 477 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms