RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 POU4F1Q01851 419 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 CAPRIN1Q14444 709 aaKnown RBP10.7□□□□□ -0.7
TCOF1-204ENST00000427724 ACAP1Q15027 740 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 ZC3H14Q6PJT7 736 aaKnown RBP10.7□□□□□ -0.7
TCOF1-204ENST00000427724 C4orf22Q6V702 233 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 GLIS1Q8NBF1 620 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 FAM3CQ92520 227 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 CD101Q93033 1021 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 PLD4Q96BZ4 506 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 KLHL32Q96NJ5 620 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 CATSPER2Q96P56 530 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 LGMNQ99538 433 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 ACSS3Q9H6R3 686 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 RMI1Q9H9A7 625 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 HCFC1R1Q9NWW0 138 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 DYRK1BQ9Y463 629 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 PCDHGC4Q9Y5F7 938 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 RHPN2P1A8MT19 583 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 LINGO3P0C6S8 592 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 TPBGLP0DKB5 382 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 TCF4P15884 667 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 AKT2P31751 481 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 RPL6Q02878 288 aaKnown RBP10.7□□□□□ -0.7
TCOF1-204ENST00000427724 ELP6Q0PNE2 266 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 LRRC38Q5VT99 294 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 ANKRD22Q5VYY1 191 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 WDR48Q8TAF3 677 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 CLEC4CQ8WTT0 213 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 WDR60Q8WVS4 1066 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 PYDC1Q8WXC3 89 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 SEC14L1Q92503 715 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 ITFG2Q969R8 447 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 HAUS8Q9BT25 410 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 FRMD8Q9BZ67 464 aaPredicted RBP10.7□□□□□ -0.7
TCOF1-204ENST00000427724 CAAP1Q9H8G2 361 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 ELOVL2Q9NXB9 296 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 TAGLN3Q9UI15 199 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 TRHDEQ9UKU6 1024 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 CDH7Q9ULB5 785 aa10.7□□□□□ -0.7
TCOF1-204ENST00000427724 DYRK3O43781 588 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 SH3BGRLO75368 114 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 VIPP01282 170 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 ANXA6P08133 673 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 SOX11P35716 441 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 NOVP48745 357 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 ERVFC1P60507 584 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 PRPF38BQ5VTL8 546 aaKnown RBP10.69□□□□□ -0.7
TCOF1-204ENST00000427724 PKN3Q6P5Z2 889 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 WFIKKN2Q8TEU8 576 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 ELMO1Q92556 727 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 CMTM5Q96DZ9 223 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 PBX4Q9BYU1 374 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 RHBGQ9H310 441 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 ATXN10Q9UBB4 475 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 COQ4Q9Y3A0 265 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 MYH11P35749 1972 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 FPGTO14772 594 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 SLC35G4P0C7Q5 338 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 ALADP13716 330 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 BST1Q10588 318 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 CCINQ13939 588 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 GALNT3Q14435 633 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 PON2Q15165 354 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 KHDC1Q4VXA5 237 aaKnown RBP10.69□□□□□ -0.7
TCOF1-204ENST00000427724 BBS12Q6ZW61 710 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 TMPRSS6Q8IU80 811 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 ARL10Q8N8L6 244 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 AP2M1Q96CW1 435 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 FAR2Q96K12 515 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 ARHGEF3Q9NR81 526 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 TBC1D23Q9NUY8 699 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 ARL8BQ9NVJ2 186 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 COLQQ9Y215 455 aaPredicted RBP10.69□□□□□ -0.7
TCOF1-204ENST00000427724 CACNA1SQ13698 1873 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 BRWD1Q9NSI6 2320 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 TCRBV9S1A1TA0A576 114 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 ERI2A8K979 691 aaKnown RBP10.69□□□□□ -0.7
TCOF1-204ENST00000427724 E9PBE3 544 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 F8W810 466 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 KLHL41O60662 606 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 LRIG2O94898 1065 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 POP4O95707 220 aaKnown RBP10.69□□□□□ -0.7
TCOF1-204ENST00000427724 AFF1P51825 1210 aaKnown RBP10.69□□□□□ -0.7
TCOF1-204ENST00000427724 ECT2LQ008S8 904 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 PPIDQ08752 370 aaKnown RBP10.69□□□□□ -0.7
TCOF1-204ENST00000427724 EMC10Q5UCC4 262 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 CLNKQ7Z7G1 428 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 JADE3Q92613 823 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 ZNF516Q92618 1163 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 TWNKQ96RR1 684 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 IL1RAPL1Q9NZN1 696 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 CRYL1Q9Y2S2 319 aa10.69□□□□□ -0.7
TCOF1-204ENST00000427724 PAPSS1O43252 624 aaPredicted RBP10.68□□□□□ -0.7
TCOF1-204ENST00000427724 NFKB1P19838 968 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 SKIV2L2P42285 1042 aaKnown RBP10.68□□□□□ -0.7
TCOF1-204ENST00000427724 USP46P62068 366 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 RUNX3Q13761 415 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 MPP2Q14168 576 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 TBCCQ15814 346 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 PARP6Q2NL67 630 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms