RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 MGME1Q9BQP7 344 aa14.49□□□□□ -0.09
PTPN13-203ENST00000427191 TAS2R7Q9NYW3 318 aa14.49□□□□□ -0.09
PTPN13-203ENST00000427191 RGS10O43665 173 aa14.49□□□□□ -0.09
PTPN13-203ENST00000427191 FGBP02675 491 aa14.49□□□□□ -0.09
PTPN13-203ENST00000427191 CSF1RP07333 972 aa14.49□□□□□ -0.09
PTPN13-203ENST00000427191 HGFP14210 728 aa14.49□□□□□ -0.09
PTPN13-203ENST00000427191 FAAP100Q0VG06 881 aa14.49□□□□□ -0.09
PTPN13-203ENST00000427191 FNDC3BQ53EP0 1204 aaKnown RBP14.49□□□□□ -0.09
PTPN13-203ENST00000427191 ANGEL2Q5VTE6 544 aaKnown RBP14.49□□□□□ -0.09
PTPN13-203ENST00000427191 SLCO6A1Q86UG4 719 aa14.49□□□□□ -0.09
PTPN13-203ENST00000427191 CXorf40AQ8TE69 158 aa14.49□□□□□ -0.09
PTPN13-203ENST00000427191 ELMO1Q92556 727 aa14.49□□□□□ -0.09
PTPN13-203ENST00000427191 PANX1Q96RD7 426 aa14.49□□□□□ -0.09
PTPN13-203ENST00000427191 ALG9Q9H6U8 611 aa14.49□□□□□ -0.09
PTPN13-203ENST00000427191 SEMA4BQ9NPR2 832 aaPredicted RBP14.49□□□□□ -0.09
PTPN13-203ENST00000427191 VPS45Q9NRW7 570 aa14.49□□□□□ -0.09
PTPN13-203ENST00000427191 MTRRQ9UBK8 725 aa14.49□□□□□ -0.09
PTPN13-203ENST00000427191 USP31Q70CQ4 1352 aa14.49□□□□□ -0.09
PTPN13-203ENST00000427191 C1QTNF3-AMACRE9PGA6 284 aa14.49□□□□□ -0.09
PTPN13-203ENST00000427191 NUDT17P0C025 328 aa14.49□□□□□ -0.09
PTPN13-203ENST00000427191 GIMD1P0DJR0 217 aa14.49□□□□□ -0.09
PTPN13-203ENST00000427191 SSTR1P30872 391 aa14.49□□□□□ -0.09
PTPN13-203ENST00000427191 SUZ12Q15022 739 aaKnown RBP14.49□□□□□ -0.09
PTPN13-203ENST00000427191 ZBTB6Q15916 424 aa14.49□□□□□ -0.09
PTPN13-203ENST00000427191 OR10H5Q8NGA6 315 aa14.49□□□□□ -0.09
PTPN13-203ENST00000427191 SEMA6BQ9H3T3 888 aa14.49□□□□□ -0.09
PTPN13-203ENST00000427191 PSIP1O75475 530 aaKnown RBP14.49□□□□□ -0.09
PTPN13-203ENST00000427191 CCNKO75909 580 aa14.49□□□□□ -0.09
PTPN13-203ENST00000427191 YBX3P16989 372 aaKnown RBP eCLIP14.49□□□□□ -0.09
PTPN13-203ENST00000427191 NDST1P52848 882 aa14.49□□□□□ -0.09
PTPN13-203ENST00000427191 BACE1P56817 501 aa14.49□□□□□ -0.09
PTPN13-203ENST00000427191 SLC22A3O75751 556 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 TROAPQ12815 778 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 WDR59Q6PJI9 974 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 TIFAQ96CG3 184 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 CCDC115Q96NT0 180 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 NEDD4LQ96PU5 975 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 C12orf4Q9NQ89 552 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 RCOR3Q9P2K3 495 aaPredicted RBP14.48□□□□□ -0.09
PTPN13-203ENST00000427191 CYP2B6P20813 491 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 IL18R1Q13478 541 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 AP5B1Q2VPB7 878 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 DSELQ8IZU8 1212 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 DUSP10Q9Y6W6 482 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 RFXANKO14593 260 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 CDYL2Q8N8U2 506 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 DNAJA4Q8WW22 397 aaPredicted RBP14.48□□□□□ -0.09
PTPN13-203ENST00000427191 SUSD6Q92537 303 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 FATE1Q969F0 183 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 PNMA5Q96PV4 448 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 TNFSF13BQ9Y275 285 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 IFNA16P05015 189 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 ADRA1DP25100 572 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 ZCCHC12Q6PEW1 402 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 ZNF34Q8IZ26 560 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 PAK6Q9NQU5 681 aaPredicted RBP14.48□□□□□ -0.09
PTPN13-203ENST00000427191 PCDHGA10Q9Y5H3 936 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 MAGI3Q5TCQ9 1506 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 MATN2O00339 956 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 ASGR1P07306 291 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 ABRQ12979 859 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 EIF2S3LQ2VIR3 472 aaKnown RBP14.48□□□□□ -0.09
PTPN13-203ENST00000427191 ANO7Q6IWH7 933 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 BRSK2Q8IWQ3 736 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 RBFAQ8N0V3 343 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 FBXL16Q8N461 479 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 FAM98AQ8NCA5 519 aaKnown RBP14.48□□□□□ -0.09
PTPN13-203ENST00000427191 WNT8BQ93098 351 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 CNPPD1Q9BV87 410 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 PPIEQ9UNP9 301 aaKnown RBP14.48□□□□□ -0.09
PTPN13-203ENST00000427191 RIIAD1A6NNX1 92 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 PDCD5O14737 125 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 GNB5O14775 395 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 ADAMDEC1O15204 470 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 PKNOX1P55347 436 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 ANTXR2P58335 489 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 NFIXQ14938 502 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 ZNF697Q5TEC3 545 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 SVOPLQ8N434 492 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 NXF3Q9H4D5 531 aaKnown RBP14.48□□□□□ -0.09
PTPN13-203ENST00000427191 ARHGAP20Q9P2F6 1191 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 NOS1APO75052 506 aaPredicted RBP14.48□□□□□ -0.09
PTPN13-203ENST00000427191 CYB5AP00167 134 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 AMHP03971 560 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 FGF1P05230 155 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 KDELR1P24390 212 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 FAM46CQ5VWP2 391 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 CHSY3Q70JA7 882 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 EFHD2Q96C19 240 aaPredicted RBP14.48□□□□□ -0.09
PTPN13-203ENST00000427191 PRMT6Q96LA8 375 aaPredicted RBP14.48□□□□□ -0.09
PTPN13-203ENST00000427191 TBC1D10AQ9BXI6 508 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 TTYH1Q9H313 450 aaPredicted RBP14.48□□□□□ -0.09
PTPN13-203ENST00000427191 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.48□□□□□ -0.09
PTPN13-203ENST00000427191 MLXQ9UH92 298 aa14.48□□□□□ -0.09
PTPN13-203ENST00000427191 BUD31P41223 144 aaPredicted RBP14.47□□□□□ -0.09
PTPN13-203ENST00000427191 GJA8P48165 433 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 SULT2A1Q06520 285 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 TAPT1Q6NXT6 567 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 ALLCQ8N6M5 410 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 SCGB3A2Q96PL1 93 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms