RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 SLC25A11Q02978 314 aaKnown RBP12.83□□□□□ -0.36
SGCE-203ENST00000425444 IL10RBQ08334 325 aa12.83□□□□□ -0.36
SGCE-203ENST00000425444 FGL2Q14314 439 aa12.83□□□□□ -0.36
SGCE-203ENST00000425444 ZNF235Q14590 738 aa12.83□□□□□ -0.36
SGCE-203ENST00000425444 RFTN1Q14699 578 aaPredicted RBP12.83□□□□□ -0.36
SGCE-203ENST00000425444 SLC18A3Q16572 532 aa12.83□□□□□ -0.36
SGCE-203ENST00000425444 HS1BP3Q53T59 392 aa12.83□□□□□ -0.36
SGCE-203ENST00000425444 AFMIDQ63HM1 303 aa12.83□□□□□ -0.36
SGCE-203ENST00000425444 KYAT3Q6YP21 454 aaKnown RBP12.83□□□□□ -0.36
SGCE-203ENST00000425444 ARHGAP36Q6ZRI8 547 aa12.83□□□□□ -0.36
SGCE-203ENST00000425444 Q6ZSR6 202 aa12.83□□□□□ -0.36
SGCE-203ENST00000425444 H2AFVQ71UI9 128 aa12.83□□□□□ -0.36
SGCE-203ENST00000425444 POLNQ7Z5Q5 900 aa12.83□□□□□ -0.36
SGCE-203ENST00000425444 VSTM4Q8IW00 320 aa12.83□□□□□ -0.36
SGCE-203ENST00000425444 TSEN2Q8NCE0 465 aaKnown RBP12.83□□□□□ -0.36
SGCE-203ENST00000425444 FAM174AQ8TBP5 190 aa12.83□□□□□ -0.36
SGCE-203ENST00000425444 CCDC97Q96F63 343 aaPredicted RBP12.83□□□□□ -0.36
SGCE-203ENST00000425444 CSPG4P5Q96PW8 444 aa12.83□□□□□ -0.36
SGCE-203ENST00000425444 ARHGAP9Q9BRR9 750 aa12.83□□□□□ -0.36
SGCE-203ENST00000425444 CPEB1Q9BZB8 566 aaKnown RBP12.83□□□□□ -0.36
SGCE-203ENST00000425444 SUV39H2Q9H5I1 410 aa12.83□□□□□ -0.36
SGCE-203ENST00000425444 ATP13A3Q9H7F0 1226 aa12.83□□□□□ -0.36
SGCE-203ENST00000425444 ABHD10Q9NUJ1 306 aa12.83□□□□□ -0.36
SGCE-203ENST00000425444 WDR70Q9NW82 654 aa12.83□□□□□ -0.36
SGCE-203ENST00000425444 DKK3Q9UBP4 350 aa12.83□□□□□ -0.36
SGCE-203ENST00000425444 IPO11Q9UI26 975 aaKnown RBP12.83□□□□□ -0.36
SGCE-203ENST00000425444 CRYBG3Q68DQ2 2970 aa12.83□□□□□ -0.36
SGCE-203ENST00000425444 FBN2P35556 2912 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 SPINT1O43278 529 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 OPA1O60313 960 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 TM7SF2O76062 418 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 CR2P20023 1033 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 AMPD1P23109 780 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 SERPINA4P29622 427 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 RABIFP47224 123 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 CDH6P55285 790 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 ELP6Q0PNE2 266 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 ZFYVE27Q5T4F4 411 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 TMCO4Q5TGY1 634 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 CDCP2Q5VXM1 449 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 TXNRD3NBQ6F5E7 133 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 ERAP2Q6P179 960 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 KANSL1Q7Z3B3 1105 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 ABI3BPQ7Z7G0 1075 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 SLC22A18ASQ8N1D0 253 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 ATPAF2Q8N5M1 289 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 DENND6BQ8NEG7 585 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 NSMCE1Q8WV22 266 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 TUBGCP5Q96RT8 1024 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 DNAJC7Q99615 494 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 WRAP53Q9BUR4 548 aaKnown RBP12.82□□□□□ -0.36
SGCE-203ENST00000425444 C1QTNF7Q9BXJ2 289 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 PACSIN1Q9BY11 444 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 PCDH18Q9HCL0 1135 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 ETNK2Q9NVF9 386 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 KLHL11Q9NVR0 708 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 KCNK4Q9NYG8 393 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 UVRAGQ9P2Y5 699 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 HS3ST3A1Q9Y663 406 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 KIF26BQ2KJY2 2108 aa12.82□□□□□ -0.36
SGCE-203ENST00000425444 CELSR2Q9HCU4 2923 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 SSU72P8A0A1W2PR75 194 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 POM121BA6NF01 834 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 ENO4A6NNW6 628 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 TMEM110-MUSTN1A8MSY1 372 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 TRIM38O00635 465 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 AREL1O15033 823 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 RAD51BO15315 384 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 MMP20O60882 483 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 PROSCO94903 275 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 TIMP2P16035 220 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 ITIH2P19823 946 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 RGRP47804 291 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 RENBPP51606 427 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 SUOXP51687 545 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 TLE1Q04724 770 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 BCL2L1Q07817 233 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 PDE1CQ14123 709 aaPredicted RBP12.81□□□□□ -0.36
SGCE-203ENST00000425444 LBRQ14739 615 aaKnown RBP12.81□□□□□ -0.36
SGCE-203ENST00000425444 LINC00303Q3SY05 128 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 C3orf38Q5JPI3 329 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 BRAT1Q6PJG6 821 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 XKR5Q6UX68 686 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 SRLQ86TD4 932 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 DCP2Q8IU60 420 aaKnown RBP12.81□□□□□ -0.36
SGCE-203ENST00000425444 CAMK1DQ8IU85 385 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 CNGA4Q8IV77 575 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 TP53INP2Q8IXH6 220 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 BBS5Q8N3I7 341 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 VOPP1Q96AW1 172 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 CCDC42Q96M95 316 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 ZNF641Q96N77 438 aaPredicted RBP12.81□□□□□ -0.36
SGCE-203ENST00000425444 LENG8Q96PV6 779 aaPredicted RBP12.81□□□□□ -0.36
SGCE-203ENST00000425444 C1QTNF2Q9BXJ5 285 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 DNAJC28Q9NX36 388 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 RCOR3Q9P2K3 495 aaPredicted RBP12.81□□□□□ -0.36
SGCE-203ENST00000425444 LCMT1Q9UIC8 334 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 NENFQ9UMX5 172 aa12.81□□□□□ -0.36
SGCE-203ENST00000425444 TDRD6O60522 2096 aaKnown RBP12.81□□□□□ -0.36
SGCE-203ENST00000425444 CACNA1DQ01668 2161 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms