RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 FHOD1Q9Y613 1164 aa16.24■□□□□ 0.19
PUDP-203ENST00000424830 TSPAN11A1L157 253 aa16.23■□□□□ 0.19
PUDP-203ENST00000424830 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.23■□□□□ 0.19
PUDP-203ENST00000424830 INSIG1O15503 277 aa16.23■□□□□ 0.19
PUDP-203ENST00000424830 MMEP08473 750 aa16.23■□□□□ 0.19
PUDP-203ENST00000424830 PRKCSHP14314 528 aaPredicted RBP16.23■□□□□ 0.19
PUDP-203ENST00000424830 EPHB2P29323 1055 aa16.23■□□□□ 0.19
PUDP-203ENST00000424830 MMP12P39900 470 aa16.23■□□□□ 0.19
PUDP-203ENST00000424830 PTPN9P43378 593 aa16.23■□□□□ 0.19
PUDP-203ENST00000424830 ATP1A2P50993 1020 aa16.23■□□□□ 0.19
PUDP-203ENST00000424830 KIAA1024LP59773 190 aa16.23■□□□□ 0.19
PUDP-203ENST00000424830 HLTFQ14527 1009 aaKnown RBP eCLIP16.23■□□□□ 0.19
PUDP-203ENST00000424830 PARP15Q460N3 678 aa16.23■□□□□ 0.19
PUDP-203ENST00000424830 VWA3BQ502W6 1294 aa16.23■□□□□ 0.19
PUDP-203ENST00000424830 BRAT1Q6PJG6 821 aa16.23■□□□□ 0.19
PUDP-203ENST00000424830 OGFOD3Q6PK18 319 aa16.23■□□□□ 0.19
PUDP-203ENST00000424830 RBM43Q6ZSC3 357 aaKnown RBP16.23■□□□□ 0.19
PUDP-203ENST00000424830 NYAP1Q6ZVC0 841 aa16.23■□□□□ 0.19
PUDP-203ENST00000424830 PIM3Q86V86 326 aa16.23■□□□□ 0.19
PUDP-203ENST00000424830 CCDC185Q8N715 623 aa16.23■□□□□ 0.19
PUDP-203ENST00000424830 RTL3Q8N8U3 475 aaKnown RBP16.23■□□□□ 0.19
PUDP-203ENST00000424830 NETO2Q8NC67 525 aa16.23■□□□□ 0.19
PUDP-203ENST00000424830 KIAA1524Q8TCG1 905 aa16.23■□□□□ 0.19
PUDP-203ENST00000424830 NTAN1Q96AB6 310 aa16.23■□□□□ 0.19
PUDP-203ENST00000424830 FUCA2Q9BTY2 467 aa16.23■□□□□ 0.19
PUDP-203ENST00000424830 NUP62CLQ9H1M0 184 aa16.23■□□□□ 0.19
PUDP-203ENST00000424830 ADNPQ9H2P0 1102 aa16.23■□□□□ 0.19
PUDP-203ENST00000424830 CLSTN2Q9H4D0 955 aa16.23■□□□□ 0.19
PUDP-203ENST00000424830 SUV39H2Q9H5I1 410 aa16.23■□□□□ 0.19
PUDP-203ENST00000424830 LHX3Q9UBR4 397 aa16.23■□□□□ 0.19
PUDP-203ENST00000424830 ATP8A1Q9Y2Q0 1164 aa16.23■□□□□ 0.19
PUDP-203ENST00000424830 C2CD4BA6NLJ0 364 aa16.22■□□□□ 0.19
PUDP-203ENST00000424830 ZW10O43264 779 aa16.22■□□□□ 0.19
PUDP-203ENST00000424830 CPNE6O95741 557 aa16.22■□□□□ 0.19
PUDP-203ENST00000424830 YBEYP58557 167 aaPredicted RBP16.22■□□□□ 0.19
PUDP-203ENST00000424830 CLCA4Q14CN2 919 aa16.22■□□□□ 0.19
PUDP-203ENST00000424830 KLHDC7AQ5VTJ3 777 aa16.22■□□□□ 0.19
PUDP-203ENST00000424830 KCTD16Q68DU8 428 aa16.22■□□□□ 0.19
PUDP-203ENST00000424830 SPECC1LQ69YQ0 1117 aa16.22■□□□□ 0.19
PUDP-203ENST00000424830 EPS8L1Q8TE68 723 aa16.22■□□□□ 0.19
PUDP-203ENST00000424830 FAM172AQ8WUF8 416 aa16.22■□□□□ 0.19
PUDP-203ENST00000424830 HTR3CQ8WXA8 447 aa16.22■□□□□ 0.19
PUDP-203ENST00000424830 OR1E3Q8WZA6 343 aa16.22■□□□□ 0.19
PUDP-203ENST00000424830 ANP32BQ92688 251 aaKnown RBP16.22■□□□□ 0.19
PUDP-203ENST00000424830 ZNF641Q96N77 438 aaPredicted RBP16.22■□□□□ 0.19
PUDP-203ENST00000424830 MAGEB5Q9BZ81 275 aa16.22■□□□□ 0.19
PUDP-203ENST00000424830 SEMA6CQ9H3T2 930 aa16.22■□□□□ 0.19
PUDP-203ENST00000424830 NOL6Q9H6R4 1146 aaKnown RBP16.22■□□□□ 0.19
PUDP-203ENST00000424830 FGF22Q9HCT0 170 aa16.22■□□□□ 0.19
PUDP-203ENST00000424830 KIAA1468Q9P260 1216 aa16.22■□□□□ 0.19
PUDP-203ENST00000424830 UBA2Q9UBT2 640 aaPredicted RBP16.22■□□□□ 0.19
PUDP-203ENST00000424830 ARHGEF17Q96PE2 2063 aaPredicted RBP16.22■□□□□ 0.19
PUDP-203ENST00000424830 TMEM202A6NGA9 273 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 RASA4BC9J798 803 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 F8VZ95 297 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 PES1O00541 588 aaKnown RBP16.21■□□□□ 0.19
PUDP-203ENST00000424830 TNFRSF10CO14798 259 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 RASA4O43374 803 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 NTRK1P04629 796 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 UCHL3P15374 230 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 WT1P19544 449 aaPredicted RBP16.21■□□□□ 0.19
PUDP-203ENST00000424830 MMP8P22894 467 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 HDAC4P56524 1084 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 SERINC3Q13530 473 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 C16orf72Q14CZ0 275 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 TSR1Q2NL82 804 aaKnown RBP16.21■□□□□ 0.19
PUDP-203ENST00000424830 AMZ1Q400G9 498 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 EFHC2Q5JST6 749 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 DPY19L2P1Q6NXN4 242 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 BORAQ6PGQ7 559 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 TMPRSS9Q7Z410 1059 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 SLFN11Q7Z7L1 901 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 ZNF677Q86XU0 584 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 PAF1Q8N7H5 531 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 PLA2G15Q8NCC3 412 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 JOSD2Q8TAC2 188 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 JPH3Q8WXH2 748 aaPredicted RBP16.21■□□□□ 0.19
PUDP-203ENST00000424830 CENPIQ92674 756 aaPredicted RBP16.21■□□□□ 0.19
PUDP-203ENST00000424830 FUBP1Q96AE4 644 aaKnown RBP16.21■□□□□ 0.19
PUDP-203ENST00000424830 TUBGCP5Q96RT8 1024 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 C11orf70Q9BRQ4 267 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 TUBGCP2Q9BSJ2 902 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 STK33Q9BYT3 514 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 KLC2Q9H0B6 622 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 TMEM168Q9H0V1 697 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 CATSPERBQ9H7T0 1116 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 RDH14Q9HBH5 336 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 MRPL40Q9NQ50 206 aaKnown RBP16.21■□□□□ 0.19
PUDP-203ENST00000424830 SDK2Q58EX2 2172 aa16.21■□□□□ 0.19
PUDP-203ENST00000424830 RELNP78509 3460 aa16.21■□□□□ 0.18
PUDP-203ENST00000424830 NBASA2RRP1 2371 aa16.21■□□□□ 0.18
PUDP-203ENST00000424830 CFAP69A5D8W1 941 aa16.2■□□□□ 0.18
PUDP-203ENST00000424830 PDE2AO00408 941 aaPredicted RBP16.2■□□□□ 0.18
PUDP-203ENST00000424830 HGSO14964 777 aaPredicted RBP16.2■□□□□ 0.18
PUDP-203ENST00000424830 ELFN1P0C7U0 828 aa16.2■□□□□ 0.18
PUDP-203ENST00000424830 KRT3P12035 628 aa16.2■□□□□ 0.18
PUDP-203ENST00000424830 CLPPQ16740 277 aaPredicted RBP16.2■□□□□ 0.18
PUDP-203ENST00000424830 PHLDB2Q86SQ0 1253 aa16.2■□□□□ 0.18
PUDP-203ENST00000424830 SFTPA2Q8IWL1 248 aa16.2■□□□□ 0.18
PUDP-203ENST00000424830 CCDC112Q8NEF3 446 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms