RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 ALDH16A1Q8IZ83 802 aa14.42□□□□□ -0.1
MSH5-206ENST00000423982 CBR4Q8N4T8 237 aa14.42□□□□□ -0.1
MSH5-206ENST00000423982 HEXDCQ8WVB3 486 aa14.42□□□□□ -0.1
MSH5-206ENST00000423982 MAELQ96JY0 434 aaKnown RBP14.42□□□□□ -0.1
MSH5-206ENST00000423982 NAA50Q9GZZ1 169 aaKnown RBP14.42□□□□□ -0.1
MSH5-206ENST00000423982 SOX17Q9H6I2 414 aaPredicted RBP14.42□□□□□ -0.1
MSH5-206ENST00000423982 CLK4Q9HAZ1 481 aaKnown RBP14.42□□□□□ -0.1
MSH5-206ENST00000423982 CHST12Q9NRB3 414 aa14.42□□□□□ -0.1
MSH5-206ENST00000423982 AURKCQ9UQB9 309 aa14.42□□□□□ -0.1
MSH5-206ENST00000423982 PSMD12O00232 456 aaPredicted RBP14.42□□□□□ -0.1
MSH5-206ENST00000423982 IGFBP6P24592 240 aaPredicted RBP14.42□□□□□ -0.1
MSH5-206ENST00000423982 CCL23P55773 120 aa14.42□□□□□ -0.1
MSH5-206ENST00000423982 TAS2R39P59534 338 aa14.42□□□□□ -0.1
MSH5-206ENST00000423982 KCTD21Q4G0X4 260 aa14.42□□□□□ -0.1
MSH5-206ENST00000423982 ARHGAP17Q68EM7 881 aa14.42□□□□□ -0.1
MSH5-206ENST00000423982 CLEC6AQ6EIG7 209 aa14.42□□□□□ -0.1
MSH5-206ENST00000423982 ESRP1Q6NXG1 681 aaKnown RBP14.42□□□□□ -0.1
MSH5-206ENST00000423982 LZICQ8WZA0 190 aa14.42□□□□□ -0.1
MSH5-206ENST00000423982 SCLYQ96I15 445 aa14.42□□□□□ -0.1
MSH5-206ENST00000423982 OSBPL6Q9BZF3 934 aa14.42□□□□□ -0.1
MSH5-206ENST00000423982 GIMAP2Q9UG22 337 aa14.42□□□□□ -0.1
MSH5-206ENST00000423982 EGFL7Q9UHF1 273 aa14.42□□□□□ -0.1
MSH5-206ENST00000423982 OGDHLQ9ULD0 1010 aa14.42□□□□□ -0.1
MSH5-206ENST00000423982 FRMPD3Q5JV73 1810 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 FAM95CA0A1B0GW59 222 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 TCRBV3S1A0A5B6 114 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 STAU1O95793 577 aaKnown RBP14.41□□□□□ -0.1
MSH5-206ENST00000423982 APOA4P06727 396 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 ADSLP30566 484 aaPredicted RBP14.41□□□□□ -0.1
MSH5-206ENST00000423982 SLC7A1P30825 629 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 GNL1P36915 607 aaPredicted RBP14.41□□□□□ -0.1
MSH5-206ENST00000423982 TRIM71Q2Q1W2 868 aaKnown RBP14.41□□□□□ -0.1
MSH5-206ENST00000423982 XKR5Q6UX68 686 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 EPHX4Q8IUS5 362 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 OFCC1Q8IZS5 231 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 SMYD1Q8NB12 490 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 RDH11Q8TC12 318 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 GIPC3Q8TF64 312 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 PHF21BQ96EK2 531 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 ANKRD60Q9BZ19 345 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 GBA3Q9H227 469 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 ATXN3LQ9H3M9 355 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 ATP11BQ9Y2G3 1177 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 MRASO14807 208 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 STAMBPO95630 424 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 CSHL1Q14406 222 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 DCAF4L1Q3SXM0 396 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 TRIM60Q495X7 471 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 GPR141Q7Z602 305 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 GPR180Q86V85 440 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 SMG8Q8ND04 991 aaKnown RBP14.41□□□□□ -0.1
MSH5-206ENST00000423982 TFAP2CQ92754 450 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 FBXL20Q96IG2 436 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 NPY6RQ99463 290 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 ADAM2Q99965 735 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 SPAG4Q9NPE6 437 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 RCOR3Q9P2K3 495 aaPredicted RBP14.41□□□□□ -0.1
MSH5-206ENST00000423982 CD300AQ9UGN4 299 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 MID2Q9UJV3 735 aa14.41□□□□□ -0.1
MSH5-206ENST00000423982 ANKRD12Q6UB98 2062 aa14.4□□□□□ -0.1
MSH5-206ENST00000423982 SH3PXD2BA1X283 911 aa14.4□□□□□ -0.1
MSH5-206ENST00000423982 SLCO1B7G3V0H7 640 aa14.4□□□□□ -0.1
MSH5-206ENST00000423982 UBDO15205 165 aa14.4□□□□□ -0.1
MSH5-206ENST00000423982 LRPAP1P30533 357 aa14.4□□□□□ -0.1
MSH5-206ENST00000423982 GRM5P41594 1212 aa14.4□□□□□ -0.1
MSH5-206ENST00000423982 YAP1P46937 504 aaKnown RBP14.4□□□□□ -0.1
MSH5-206ENST00000423982 SNX16P57768 344 aa14.4□□□□□ -0.1
MSH5-206ENST00000423982 RAB10P61026 200 aa14.4□□□□□ -0.1
MSH5-206ENST00000423982 ZNF789Q5FWF6 425 aa14.4□□□□□ -0.1
MSH5-206ENST00000423982 RBM20Q5T481 1227 aaKnown RBP14.4□□□□□ -0.1
MSH5-206ENST00000423982 Q6ZNX1 250 aa14.4□□□□□ -0.1
MSH5-206ENST00000423982 ARHGAP36Q6ZRI8 547 aa14.4□□□□□ -0.1
MSH5-206ENST00000423982 FAM126BQ8IXS8 530 aa14.4□□□□□ -0.1
MSH5-206ENST00000423982 ZNF419Q96HQ0 510 aaPredicted RBP14.4□□□□□ -0.1
MSH5-206ENST00000423982 PAWRQ96IZ0 340 aaKnown RBP14.4□□□□□ -0.1
MSH5-206ENST00000423982 ELMO2Q96JJ3 720 aa14.4□□□□□ -0.1
MSH5-206ENST00000423982 FAIMQ9NVQ4 179 aa14.4□□□□□ -0.1
MSH5-206ENST00000423982 ANKRD6Q9Y2G4 727 aa14.4□□□□□ -0.1
MSH5-206ENST00000423982 PTGDR2Q9Y5Y4 395 aa14.4□□□□□ -0.1
MSH5-206ENST00000423982 MYLKQ15746 1914 aa14.4□□□□□ -0.1
MSH5-206ENST00000423982 A0A1W2PPW3 197 aa14.4□□□□□ -0.1
MSH5-206ENST00000423982 ARNTP27540 789 aa14.4□□□□□ -0.1
MSH5-206ENST00000423982 TPI1P60174 286 aa14.4□□□□□ -0.1
MSH5-206ENST00000423982 CBX3Q13185 183 aa14.4□□□□□ -0.1
MSH5-206ENST00000423982 GPR107Q5VW38 600 aa14.4□□□□□ -0.1
MSH5-206ENST00000423982 TTC33Q6PID6 262 aaPredicted RBP14.4□□□□□ -0.1
MSH5-206ENST00000423982 PATL1Q86TB9 770 aaKnown RBP14.4□□□□□ -0.1
MSH5-206ENST00000423982 RETREG3Q86VR2 466 aa14.4□□□□□ -0.1
MSH5-206ENST00000423982 TTC39CQ8N584 583 aa14.4□□□□□ -0.1
MSH5-206ENST00000423982 FAM105AQ9NUU6 356 aa14.4□□□□□ -0.1
MSH5-206ENST00000423982 UTP6Q9NYH9 597 aaKnown RBP14.4□□□□□ -0.1
MSH5-206ENST00000423982 IPO11Q9UI26 975 aaKnown RBP14.4□□□□□ -0.1
MSH5-206ENST00000423982 FYNP06241 537 aa14.39□□□□□ -0.11
MSH5-206ENST00000423982 STMN1P16949 149 aa14.39□□□□□ -0.11
MSH5-206ENST00000423982 CHRM3P20309 590 aa14.39□□□□□ -0.11
MSH5-206ENST00000423982 NOS2P35228 1153 aa14.39□□□□□ -0.11
MSH5-206ENST00000423982 ADRA1BP35368 520 aa14.39□□□□□ -0.11
MSH5-206ENST00000423982 SLC1A2P43004 574 aa14.39□□□□□ -0.11
MSH5-206ENST00000423982 MNX1P50219 401 aaPredicted RBP14.39□□□□□ -0.11
MSH5-206ENST00000423982 PMS2P3Q13401 168 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms