RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 PPM1DO15297 605 aa9.05□□□□□ -0.96
TRIM39-206ENST00000420746 ENDOD1O94919 500 aa9.05□□□□□ -0.96
TRIM39-206ENST00000420746 NADKO95544 446 aaPredicted RBP9.05□□□□□ -0.96
TRIM39-206ENST00000420746 ECEL1O95672 775 aa9.05□□□□□ -0.96
TRIM39-206ENST00000420746 MT-ND3P03897 115 aa9.05□□□□□ -0.96
TRIM39-206ENST00000420746 COX6B1P14854 86 aa9.05□□□□□ -0.96
TRIM39-206ENST00000420746 CD19P15391 556 aa9.05□□□□□ -0.96
TRIM39-206ENST00000420746 GTF2H1P32780 548 aa9.05□□□□□ -0.96
TRIM39-206ENST00000420746 GCLMP48507 274 aa9.05□□□□□ -0.96
TRIM39-206ENST00000420746 RPL34P49207 117 aaKnown RBP9.05□□□□□ -0.96
TRIM39-206ENST00000420746 CCL11P51671 97 aa9.05□□□□□ -0.96
TRIM39-206ENST00000420746 YWHAEP62258 255 aaKnown RBP9.05□□□□□ -0.96
TRIM39-206ENST00000420746 CDK18Q07002 472 aa9.05□□□□□ -0.96
TRIM39-206ENST00000420746 PPP3CAQ08209 521 aa9.05□□□□□ -0.96
TRIM39-206ENST00000420746 DNASE1L3Q13609 305 aa9.05□□□□□ -0.96
TRIM39-206ENST00000420746 STILQ15468 1287 aa9.05□□□□□ -0.96
TRIM39-206ENST00000420746 TMEM52BQ4KMG9 183 aa9.05□□□□□ -0.96
TRIM39-206ENST00000420746 CRB2Q5IJ48 1285 aa9.05□□□□□ -0.96
TRIM39-206ENST00000420746 NYAP1Q6ZVC0 841 aa9.05□□□□□ -0.96
TRIM39-206ENST00000420746 OR10G6Q8NH81 332 aa9.05□□□□□ -0.96
TRIM39-206ENST00000420746 CCL4L1Q8NHW4 92 aa9.05□□□□□ -0.96
TRIM39-206ENST00000420746 UBE2Q2Q8WVN8 375 aa9.05□□□□□ -0.96
TRIM39-206ENST00000420746 EEF2KMTQ96G04 330 aa9.05□□□□□ -0.96
TRIM39-206ENST00000420746 C7orf25Q9BPX7 421 aa9.05□□□□□ -0.96
TRIM39-206ENST00000420746 GSDMCQ9BYG8 508 aa9.05□□□□□ -0.96
TRIM39-206ENST00000420746 POPDC2Q9HBU9 364 aa9.05□□□□□ -0.96
TRIM39-206ENST00000420746 C5AR2Q9P296 337 aa9.05□□□□□ -0.96
TRIM39-206ENST00000420746 DIDO1Q9BTC0 2240 aaKnown RBP9.04□□□□□ -0.96
TRIM39-206ENST00000420746 A0A0D9SEW6 157 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 TMEM202A6NGA9 273 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 PIK3R2O00459 728 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 PDXKO00764 312 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 PRICKLE3O43900 615 aaPredicted RBP9.04□□□□□ -0.96
TRIM39-206ENST00000420746 ZMPSTE24O75844 475 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 RHOBTB3O94955 611 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 GSRP00390 522 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 NR3C1P04150 777 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 PAEPP09466 180 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 ANKRD34CP0C6C1 535 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 CCNYL3P0C7X3 344 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 CD99P14209 185 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 FASLGP48023 281 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 DNA2P51530 1060 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 MCCD1P59942 119 aaPredicted RBP9.04□□□□□ -0.96
TRIM39-206ENST00000420746 FOXM1Q08050 763 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 ELP6Q0PNE2 266 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 ILF3Q12906 894 aaKnown RBP eCLIP9.04□□□□□ -0.96
TRIM39-206ENST00000420746 KRT39Q6A163 491 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 BNC2Q6ZN30 1099 aaPredicted RBP9.04□□□□□ -0.96
TRIM39-206ENST00000420746 SYVN1Q86TM6 617 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 TTC7BQ86TV6 843 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 NAGSQ8N159 534 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 PIP4P2Q8N4L2 257 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 CISD2Q8N5K1 135 aaKnown RBP9.04□□□□□ -0.96
TRIM39-206ENST00000420746 GALNT6Q8NCL4 622 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 FBXL13Q8NEE6 735 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 VOPP1Q96AW1 172 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 C14orf79Q96F83 325 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 AHCYL2Q96HN2 611 aaKnown RBP9.04□□□□□ -0.96
TRIM39-206ENST00000420746 CLIC6Q96NY7 704 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 SMAD5Q99717 465 aaKnown RBP9.04□□□□□ -0.96
TRIM39-206ENST00000420746 GPR87Q9BY21 358 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 MIS12Q9H081 205 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 ZMYND15Q9H091 742 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 ZSCAN16Q9H4T2 348 aaPredicted RBP9.04□□□□□ -0.96
TRIM39-206ENST00000420746 ACTL8Q9H568 366 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 SLC39A2Q9NP94 309 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 AGPAT4Q9NRZ5 378 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 TRNAU1APQ9NX07 287 aaKnown RBP9.04□□□□□ -0.96
TRIM39-206ENST00000420746 TAAR2Q9P1P5 351 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 USP25Q9UHP3 1055 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 PADI1Q9ULC6 663 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 B3GNT3Q9Y2A9 372 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 HS3ST4Q9Y661 456 aa9.04□□□□□ -0.96
TRIM39-206ENST00000420746 COPG1Q9Y678 874 aaKnown RBP9.04□□□□□ -0.96
TRIM39-206ENST00000420746 PVALEFA0A1B0GWK0 134 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 ILVBLA1L0T0 632 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 ARGFXA6NJG6 315 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 BHMG1C9JSJ3 638 aaPredicted RBP9.03□□□□□ -0.96
TRIM39-206ENST00000420746 PDE2AO00408 941 aaPredicted RBP9.03□□□□□ -0.96
TRIM39-206ENST00000420746 POP4O95707 220 aaKnown RBP9.03□□□□□ -0.96
TRIM39-206ENST00000420746 UGT2B4P06133 528 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 STSP08842 583 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 TRIM49P0CI25 452 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 TRIM49CP0CI26 452 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 ZNF28P17035 718 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 TRIM23P36406 574 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 ACADSBP45954 432 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 ZNF235Q14590 738 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 IL11RAQ14626 422 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 E2F4Q16254 413 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 CNGA2Q16280 664 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 ZNF630Q2M218 657 aaPredicted RBP9.03□□□□□ -0.96
TRIM39-206ENST00000420746 PLEKHN1Q494U1 663 aaPredicted RBP9.03□□□□□ -0.96
TRIM39-206ENST00000420746 MIIPQ5JXC2 388 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 NRROSQ86YC3 692 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 ZNF295-AS1Q8N0V1 137 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 NXPE1Q8N323 547 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 GLIS1Q8NBF1 620 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 FDCSPQ8NFU4 85 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms