RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 BUB1BO60566 1050 aaPredicted RBP20.5■□□□□ 0.87
MCF2L-212ENST00000420013 SOCS5O75159 536 aa20.5■□□□□ 0.87
MCF2L-212ENST00000420013 SERPINC1P01008 464 aa20.5■□□□□ 0.87
MCF2L-212ENST00000420013 ELFN1P0C7U0 828 aa20.5■□□□□ 0.87
MCF2L-212ENST00000420013 CTSEP14091 401 aa20.5■□□□□ 0.87
MCF2L-212ENST00000420013 KELP23276 732 aa20.5■□□□□ 0.87
MCF2L-212ENST00000420013 C1orf61Q13536 156 aa20.5■□□□□ 0.87
MCF2L-212ENST00000420013 DPPA4Q7L190 304 aa20.5■□□□□ 0.87
MCF2L-212ENST00000420013 GKN2Q86XP6 184 aa20.5■□□□□ 0.87
MCF2L-212ENST00000420013 SPACA3Q8IXA5 215 aa20.5■□□□□ 0.87
MCF2L-212ENST00000420013 PAF1Q8N7H5 531 aa20.5■□□□□ 0.87
MCF2L-212ENST00000420013 LSM14AQ8ND56 463 aaKnown RBP20.5■□□□□ 0.87
MCF2L-212ENST00000420013 OR6C4Q8NGE1 309 aa20.5■□□□□ 0.87
MCF2L-212ENST00000420013 BBC3Q96PG8 261 aaPredicted RBP20.5■□□□□ 0.87
MCF2L-212ENST00000420013 ASCL3Q9NQ33 180 aa20.5■□□□□ 0.87
MCF2L-212ENST00000420013 PCDHGA8Q9Y5G5 932 aa20.5■□□□□ 0.87
MCF2L-212ENST00000420013 TEX51A0A1B0GUA7 166 aa20.49■□□□□ 0.87
MCF2L-212ENST00000420013 TK2O00142 265 aa20.49■□□□□ 0.87
MCF2L-212ENST00000420013 YY2O15391 372 aa20.49■□□□□ 0.87
MCF2L-212ENST00000420013 PCCBP05166 539 aa20.49■□□□□ 0.87
MCF2L-212ENST00000420013 NFKBIAP25963 317 aa20.49■□□□□ 0.87
MCF2L-212ENST00000420013 SERPINB6P35237 376 aa20.49■□□□□ 0.87
MCF2L-212ENST00000420013 CCDC173Q0VFZ6 552 aa20.49■□□□□ 0.87
MCF2L-212ENST00000420013 RALGDSQ12967 914 aa20.49■□□□□ 0.87
MCF2L-212ENST00000420013 ZNF235Q14590 738 aa20.49■□□□□ 0.87
MCF2L-212ENST00000420013 INPP5AQ14642 412 aa20.49■□□□□ 0.87
MCF2L-212ENST00000420013 TDRD12Q587J7 1177 aaKnown RBP20.49■□□□□ 0.87
MCF2L-212ENST00000420013 PERM1Q5SV97 790 aa20.49■□□□□ 0.87
MCF2L-212ENST00000420013 BROXQ5VW32 411 aa20.49■□□□□ 0.87
MCF2L-212ENST00000420013 HID1Q8IV36 788 aa20.49■□□□□ 0.87
MCF2L-212ENST00000420013 PCDH19Q8TAB3 1148 aa20.49■□□□□ 0.87
MCF2L-212ENST00000420013 IQCDQ96DY2 449 aa20.49■□□□□ 0.87
MCF2L-212ENST00000420013 KCTD5Q9NXV2 234 aa20.49■□□□□ 0.87
MCF2L-212ENST00000420013 CWC15Q9P013 229 aaKnown RBP20.49■□□□□ 0.87
MCF2L-212ENST00000420013 PADI4Q9UM07 663 aa20.49■□□□□ 0.87
MCF2L-212ENST00000420013 ENTPD2Q9Y5L3 495 aa20.49■□□□□ 0.87
MCF2L-212ENST00000420013 BZW2Q9Y6E2 419 aaKnown RBP20.49■□□□□ 0.87
MCF2L-212ENST00000420013 DGKBQ9Y6T7 804 aa20.49■□□□□ 0.87
MCF2L-212ENST00000420013 CACNB4O00305 520 aaPredicted RBP20.48■□□□□ 0.87
MCF2L-212ENST00000420013 TRAFD1O14545 582 aaPredicted RBP20.48■□□□□ 0.87
MCF2L-212ENST00000420013 HOXC4P09017 264 aaPredicted RBP20.48■□□□□ 0.87
MCF2L-212ENST00000420013 SRP54P61011 504 aaKnown RBP20.48■□□□□ 0.87
MCF2L-212ENST00000420013 SPIDRQ14159 915 aa20.48■□□□□ 0.87
MCF2L-212ENST00000420013 LBRQ14739 615 aaKnown RBP20.48■□□□□ 0.87
MCF2L-212ENST00000420013 BOLA3Q53S33 107 aa20.48■□□□□ 0.87
MCF2L-212ENST00000420013 C3orf38Q5JPI3 329 aa20.48■□□□□ 0.87
MCF2L-212ENST00000420013 TMCO3Q6UWJ1 677 aa20.48■□□□□ 0.87
MCF2L-212ENST00000420013 ENPP7Q6UWV6 458 aa20.48■□□□□ 0.87
MCF2L-212ENST00000420013 LIPIQ6XZB0 460 aa20.48■□□□□ 0.87
MCF2L-212ENST00000420013 BBS5Q8N3I7 341 aa20.48■□□□□ 0.87
MCF2L-212ENST00000420013 NIPA2Q8N8Q9 360 aa20.48■□□□□ 0.87
MCF2L-212ENST00000420013 TEKT4Q8WW24 435 aa20.48■□□□□ 0.87
MCF2L-212ENST00000420013 RBM15Q96T37 977 aaKnown RBP eCLIP20.48■□□□□ 0.878e-6■■■■■ 30.1
MCF2L-212ENST00000420013 CCDC3Q9BQI4 270 aa20.48■□□□□ 0.87
MCF2L-212ENST00000420013 KIF26BQ2KJY2 2108 aa20.48■□□□□ 0.87
MCF2L-212ENST00000420013 A0A1W2PQJ5 194 aa20.47■□□□□ 0.87
MCF2L-212ENST00000420013 NTN3O00634 580 aaPredicted RBP20.47■□□□□ 0.87
MCF2L-212ENST00000420013 ATXN7O15265 892 aaPredicted RBP20.47■□□□□ 0.87
MCF2L-212ENST00000420013 RECQL5O94762 991 aaPredicted RBP20.47■□□□□ 0.87
MCF2L-212ENST00000420013 PIGHQ14442 188 aaPredicted RBP20.47■□□□□ 0.87
MCF2L-212ENST00000420013 IQCB1Q15051 598 aa20.47■□□□□ 0.87
MCF2L-212ENST00000420013 RALGPS1Q5JS13 557 aa20.47■□□□□ 0.87
MCF2L-212ENST00000420013 ARHGAP36Q6ZRI8 547 aa20.47■□□□□ 0.87
MCF2L-212ENST00000420013 GPR155Q7Z3F1 870 aa20.47■□□□□ 0.87
MCF2L-212ENST00000420013 KYQ8NBH2 561 aa20.47■□□□□ 0.87
MCF2L-212ENST00000420013 KCNE4Q8WWG9 221 aa20.47■□□□□ 0.87
MCF2L-212ENST00000420013 SYN2Q92777 582 aaPredicted RBP20.47■□□□□ 0.87
MCF2L-212ENST00000420013 TSACCQ96A04 125 aaPredicted RBP20.47■□□□□ 0.87
MCF2L-212ENST00000420013 PDXPQ96GD0 296 aa20.47■□□□□ 0.87
MCF2L-212ENST00000420013 LIN37Q96GY3 246 aaPredicted RBP20.47■□□□□ 0.87
MCF2L-212ENST00000420013 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.47■□□□□ 0.87
MCF2L-212ENST00000420013 MYO1AQ9UBC5 1043 aa20.47■□□□□ 0.87
MCF2L-212ENST00000420013 SATB2Q9UPW6 733 aa20.47■□□□□ 0.87
MCF2L-212ENST00000420013 OR1A2Q9Y585 309 aa20.47■□□□□ 0.87
MCF2L-212ENST00000420013 CCDC187A0A096LP49 1063 aa20.46■□□□□ 0.87
MCF2L-212ENST00000420013 TNFRSF10CO14798 259 aa20.46■□□□□ 0.87
MCF2L-212ENST00000420013 HTRA2O43464 458 aaPredicted RBP20.46■□□□□ 0.87
MCF2L-212ENST00000420013 TNFP01375 233 aa20.46■□□□□ 0.87
MCF2L-212ENST00000420013 CELA2BP08218 269 aaPredicted RBP20.46■□□□□ 0.87
MCF2L-212ENST00000420013 RBMS1P29558 406 aaKnown RBP20.46■□□□□ 0.87
MCF2L-212ENST00000420013 SCNN1BP51168 640 aa20.46■□□□□ 0.87
MCF2L-212ENST00000420013 TMPRSS3P57727 454 aa20.46■□□□□ 0.87
MCF2L-212ENST00000420013 NR1I3Q14994 352 aa20.46■□□□□ 0.87
MCF2L-212ENST00000420013 CRTC1Q6UUV9 634 aa20.46■□□□□ 0.87
MCF2L-212ENST00000420013 POLNQ7Z5Q5 900 aa20.46■□□□□ 0.87
MCF2L-212ENST00000420013 ATPAF2Q8N5M1 289 aa20.46■□□□□ 0.87
MCF2L-212ENST00000420013 OR56A4Q8NGH8 313 aa20.46■□□□□ 0.87
MCF2L-212ENST00000420013 WDR36Q8NI36 951 aaKnown RBP20.46■□□□□ 0.87
MCF2L-212ENST00000420013 CCDC97Q96F63 343 aaPredicted RBP20.46■□□□□ 0.87
MCF2L-212ENST00000420013 ATXN7L3BQ96GX2 97 aa20.46■□□□□ 0.87
MCF2L-212ENST00000420013 NAP1L5Q96NT1 182 aaPredicted RBP20.46■□□□□ 0.87
MCF2L-212ENST00000420013 MGME1Q9BQP7 344 aa20.46■□□□□ 0.87
MCF2L-212ENST00000420013 FUCA2Q9BTY2 467 aa20.46■□□□□ 0.87
MCF2L-212ENST00000420013 DPH1Q9BZG8 443 aa20.46■□□□□ 0.87
MCF2L-212ENST00000420013 WDR26Q9H7D7 661 aa20.46■□□□□ 0.87
MCF2L-212ENST00000420013 RCOR3Q9P2K3 495 aaPredicted RBP20.46■□□□□ 0.87
MCF2L-212ENST00000420013 GPR34Q9UPC5 381 aa20.46■□□□□ 0.87
MCF2L-212ENST00000420013 SCN8AQ9UQD0 1980 aa20.45■□□□□ 0.86
MCF2L-212ENST00000420013 PDE2AO00408 941 aaPredicted RBP20.45■□□□□ 0.86
MCF2L-212ENST00000420013 CPP00450 1065 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms