RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 H7C0S8 307 aa14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 TRBC1P01850 177 aa14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 PRNPP04156 253 aa14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 SHBGP04278 402 aa14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 PAMP19021 973 aa14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 HMGCLP35914 325 aa14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 ARCN1P48444 511 aaKnown RBP14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 PTPN5P54829 565 aa14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 MRPS21P82921 87 aaKnown RBP14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 KDSRQ06136 332 aa14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 CDKN3Q16667 212 aa14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 UBAP2Q5T6F2 1119 aaKnown RBP14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 TSTD2Q5T7W7 516 aa14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 PDPK2PQ6A1A2 396 aa14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 CASC4Q6P4E1 433 aa14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 ADGRD1Q6QNK2 874 aa14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 TRMT11Q7Z4G4 463 aaKnown RBP14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 LRRC6Q86X45 466 aa14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 DTX3LQ8TDB6 740 aa14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 FBF1Q8TES7 1133 aa14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 SLC44A1Q8WWI5 657 aa14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 PBXIP1Q96AQ6 731 aa14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 FAM122AQ96E09 287 aa14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 FCRL3Q96P31 734 aaPredicted RBP14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 RUFY1Q96T51 708 aa14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 GABRG3Q99928 467 aa14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 FBRSL1Q9HCM7 1045 aaKnown RBP14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 NSMCE4AQ9NXX6 385 aa14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 DUSP12Q9UNI6 340 aa14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 PCDHB9Q9Y5E1 797 aa14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 PIAS3Q9Y6X2 628 aa14.33□□□□□ -0.12
SHMT1P1-201ENST00000419974 ZNF318Q5VUA4 2279 aa14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 CAPN8A6NHC0 703 aa14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 SHISA7A6NL88 538 aa14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 MAN2B1O00754 1011 aa14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 RASGRF2O14827 1237 aa14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 SLC7A4O43246 635 aa14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 SYF2O95926 243 aaKnown RBP14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 TPH1P17752 444 aa14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 NUMBP49757 651 aa14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 ZNF140P52738 457 aaPredicted RBP14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 CRADDP78560 199 aa14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 MGAT5Q09328 741 aa14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 IFFO1Q0D2I5 559 aa14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 CAMK2GQ13555 558 aaPredicted RBP14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 POU6F1Q14863 301 aa14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 LONRF1Q17RB8 773 aa14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 SKIDA1Q1XH10 827 aa14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 FNDC3BQ53EP0 1204 aaKnown RBP14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 ZNF805Q5CZA5 627 aa14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 MARK2Q7KZI7 788 aaKnown RBP14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 DSG4Q86SJ6 1040 aa14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 SLC26A11Q86WA9 606 aa14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 SLC25A41Q8N5S1 370 aa14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 ST13P5Q8NFI4 369 aaPredicted RBP14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 OR13J1Q8NGT2 312 aa14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 GABPB2Q8TAK5 448 aaPredicted RBP14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 CDKL2Q92772 493 aa14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 EZH1Q92800 747 aaPredicted RBP14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 RMDN1Q96DB5 314 aa14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 MFSD3Q96ES6 412 aa14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 CERS2Q96G23 380 aa14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 TMBIM4Q9HC24 238 aa14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 PIH1D1Q9NWS0 290 aaKnown RBP14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.32□□□□□ -0.12
SHMT1P1-201ENST00000419974 EXOC1LA0A1B0GW35 172 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 C2orf81A6NN90 581 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 GOLGA8KD6RF30 607 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 MYZAPP0CAP1 466 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 CNTFP26441 200 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 GCAP28676 217 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 IL12RB1P42701 662 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 PRKCQQ04759 706 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 GRSF1Q12849 480 aaKnown RBP eCLIP14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 DNAJC3Q13217 504 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 MTM1Q13496 603 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 GALNT3Q14435 633 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 HP1BP3Q5SSJ5 553 aaPredicted RBP14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 CEP85LQ5SZL2 805 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 AGBL2Q5U5Z8 902 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 ZDHHC20Q5W0Z9 365 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 NAIF1Q69YI7 327 aaPredicted RBP14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 TXNDC11Q6PKC3 985 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 SERPINA13PQ6UXR4 307 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 KIAA0408Q6ZU52 694 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 TPRG1Q6ZUI0 275 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 CBARPQ8N350 705 aaPredicted RBP14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 SYNPOQ8N3V7 929 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 FBXL6Q8N531 539 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 CHST14Q8NCH0 376 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 LPCAT1Q8NF37 534 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 GPR150Q8NGU9 434 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 CALML6Q8TD86 181 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 OR8D1Q8WZ84 308 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 CFAP36Q96G28 342 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 FAM129BQ96TA1 746 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 PRRX2Q99811 253 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 MCMBPQ9BTE3 642 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms