RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 EBF1Q9UH73 591 aa13.35□□□□□ -0.27
CNN3-203ENST00000415017 SPO11Q9Y5K1 396 aa13.35□□□□□ -0.27
CNN3-203ENST00000415017 TRPM6Q9BX84 2022 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 GOLGA8MH3BSY2 632 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 K7ESF4 209 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 KPNA3O00505 521 aaPredicted RBP13.34□□□□□ -0.27
CNN3-203ENST00000415017 MID1O15344 667 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 SLC7A4O43246 635 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 LDB2O43679 373 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 TDGF1P13385 188 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 ADRB3P13945 408 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 MCM3P25205 808 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 HNF1BP35680 557 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 MMP12P39900 470 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 P2RY2P41231 377 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 ABL2P42684 1182 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 LMAN1P49257 510 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 CREB5Q02930 508 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 ACVR1Q04771 509 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 CNTN1Q12860 1018 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 RALGDSQ12967 914 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 GALNT3Q14435 633 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 ELF2Q15723 593 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 HIF1AQ16665 826 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 DPPA4Q7L190 304 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 KDELC2Q7Z4H8 507 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 TMEM135Q86UB9 458 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 IGDCC3Q8IVU1 814 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 PDIK1LQ8N165 341 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 LPCAT1Q8NF37 534 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 MDGA1Q8NFP4 955 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 BRSK1Q8TDC3 778 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 AENQ8WTP8 325 aaKnown RBP13.34□□□□□ -0.27
CNN3-203ENST00000415017 PTCD2Q8WV60 388 aaKnown RBP13.34□□□□□ -0.27
CNN3-203ENST00000415017 IFT81Q8WYA0 676 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 PEX13Q92968 403 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 EID2BQ96D98 161 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 SMIM14Q96QK8 99 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 FMO2Q99518 471 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 KIFC1Q9BW19 673 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 TSPYL1Q9H0U9 437 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 TRABDQ9H4I3 376 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 MRM3Q9HC36 420 aaKnown RBP13.34□□□□□ -0.27
CNN3-203ENST00000415017 FZD4Q9ULV1 537 aa13.34□□□□□ -0.27
CNN3-203ENST00000415017 CEP192Q8TEP8 1941 aa13.33□□□□□ -0.28
CNN3-203ENST00000415017 PLXNB3Q9ULL4 1909 aa13.33□□□□□ -0.28
CNN3-203ENST00000415017 TCRBV21S2A2A0A5A6 115 aa13.33□□□□□ -0.28
CNN3-203ENST00000415017 MAGEB16A2A368 324 aa13.33□□□□□ -0.28
CNN3-203ENST00000415017 NPIPB15A6NHN6 443 aaPredicted RBP13.33□□□□□ -0.28
CNN3-203ENST00000415017 SDR42E2A6NKP2 422 aa13.33□□□□□ -0.28
CNN3-203ENST00000415017 DCNP07585 359 aaKnown RBP13.33□□□□□ -0.28
CNN3-203ENST00000415017 FAM153BP0C7A2 387 aa13.33□□□□□ -0.28
CNN3-203ENST00000415017 ADRA1DP25100 572 aa13.33□□□□□ -0.28
CNN3-203ENST00000415017 PSMD8P48556 350 aa13.33□□□□□ -0.28
CNN3-203ENST00000415017 NEK3P51956 506 aa13.33□□□□□ -0.28
CNN3-203ENST00000415017 ARL4CP56559 192 aa13.33□□□□□ -0.28
CNN3-203ENST00000415017 DHX9Q08211 1270 aaKnown RBP13.33□□□□□ -0.28
CNN3-203ENST00000415017 PTPRRQ15256 657 aa13.33□□□□□ -0.28
CNN3-203ENST00000415017 FAM153CQ494X1 144 aa13.33□□□□□ -0.28
CNN3-203ENST00000415017 TMEM52BQ4KMG9 183 aa13.33□□□□□ -0.28
CNN3-203ENST00000415017 PCID2Q5JVF3 399 aa13.33□□□□□ -0.28
CNN3-203ENST00000415017 CRTC1Q6UUV9 634 aa13.33□□□□□ -0.28
CNN3-203ENST00000415017 TMC3Q7Z5M5 1100 aa13.33□□□□□ -0.28
CNN3-203ENST00000415017 MPP5Q8N3R9 675 aa13.33□□□□□ -0.28
CNN3-203ENST00000415017 SLC25A41Q8N5S1 370 aa13.33□□□□□ -0.28
CNN3-203ENST00000415017 PDCD6IPQ8WUM4 868 aaKnown RBP13.33□□□□□ -0.28
CNN3-203ENST00000415017 RMDN1Q96DB5 314 aa13.33□□□□□ -0.28
CNN3-203ENST00000415017 SIPA1Q96FS4 1042 aa13.33□□□□□ -0.28
CNN3-203ENST00000415017 EBNA1BP2Q99848 306 aaKnown RBP13.33□□□□□ -0.28
CNN3-203ENST00000415017 SLC6A17Q9H1V8 727 aa13.33□□□□□ -0.28
CNN3-203ENST00000415017 PCDH12Q9NPG4 1184 aa13.33□□□□□ -0.28
CNN3-203ENST00000415017 PRMT8Q9NR22 394 aaPredicted RBP13.33□□□□□ -0.28
CNN3-203ENST00000415017 BFARQ9NZS9 450 aa13.33□□□□□ -0.28
CNN3-203ENST00000415017 MTRF1LQ9UGC7 380 aaKnown RBP13.33□□□□□ -0.28
CNN3-203ENST00000415017 SERGEFQ9UGK8 458 aa13.33□□□□□ -0.28
CNN3-203ENST00000415017 SOX13Q9UN79 622 aa13.33□□□□□ -0.28
CNN3-203ENST00000415017 FADS3Q9Y5Q0 445 aa13.33□□□□□ -0.28
CNN3-203ENST00000415017 CCDC163A0A0D9SF12 145 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 FAM237BA0A1B0GVD1 139 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 H0Y858 1186 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 PLRG1O43660 514 aaKnown RBP13.32□□□□□ -0.28
CNN3-203ENST00000415017 DNTTP04053 509 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 ALPIP09923 528 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 ZNF30P17039 623 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 TPH1P17752 444 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 GM2AP17900 193 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 LHCGRP22888 699 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 MGAT1P26572 445 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 HMGCLP35914 325 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 PTSQ03393 145 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 FRG1Q14331 258 aaKnown RBP13.32□□□□□ -0.28
CNN3-203ENST00000415017 HLTFQ14527 1009 aaKnown RBP eCLIP13.32□□□□□ -0.28
CNN3-203ENST00000415017 AGERQ15109 404 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 TAF1AQ15573 450 aaPredicted RBP13.32□□□□□ -0.28
CNN3-203ENST00000415017 DNAJC21Q5F1R6 531 aaKnown RBP13.32□□□□□ -0.28
CNN3-203ENST00000415017 STEAP4Q687X5 459 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 CEP128Q6ZU80 1094 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 CYS1Q717R9 158 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 CENPUQ71F23 418 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 TTC7BQ86TV6 843 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms