RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 QDPRP09417 244 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 CREB1P16220 341 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 GATA3P23771 443 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 CTGFP29279 349 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 PBLDP30039 288 aaPredicted RBP2.65□□□□□ -1.99
MCF2-204ENST00000414978 THPOP40225 353 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 PTGER3P43115 390 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 PCP4P48539 62 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 VPS41P49754 854 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 TUBB4BP68371 445 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 JAG1P78504 1218 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 BYSLQ13895 437 aaKnown RBP2.65□□□□□ -1.99
MCF2-204ENST00000414978 DLG2Q15700 870 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 FKBP1CQ5VVH2 108 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 CNSTQ6PJW8 725 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 CPLX2Q6PUV4 134 aaKnown RBP2.65□□□□□ -1.99
MCF2-204ENST00000414978 SLC46A3Q7Z3Q1 461 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 MAVSQ7Z434 540 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 TRABD2AQ86V40 505 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 KBTBD6Q86V97 674 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 KIAA2013Q8IYS2 634 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 FBXO39Q8N4B4 442 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 TMCO5AQ8N6Q1 288 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 TBC1D16Q8TBP0 767 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 UTP15Q8TED0 518 aaKnown RBP2.65□□□□□ -1.99
MCF2-204ENST00000414978 DUSP19Q8WTR2 217 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 KCNE4Q8WWG9 221 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 GTF3C6Q969F1 213 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 NXNL1Q96CM4 212 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 RMDN1Q96DB5 314 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 CEP295NLQ96MC4 621 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 ZNF558Q96NG5 402 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 PIMREGQ9BSJ6 248 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 THUMPD3Q9BV44 507 aaKnown RBP2.65□□□□□ -1.99
MCF2-204ENST00000414978 THAP9Q9H5L6 903 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 PNPLA3Q9NST1 481 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 SETD4Q9NVD3 440 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 PPIEQ9UNP9 301 aaKnown RBP2.65□□□□□ -1.99
MCF2-204ENST00000414978 NUDCQ9Y266 331 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 PCDHA5Q9Y5H7 936 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 SQORQ9Y6N5 450 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 FPGT-TNNI3KV9GXZ4 949 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 PFASO15067 1338 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 ZNF536O15090 1300 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 ASTN2O75129 1339 aaPredicted RBP2.65□□□□□ -1.99
MCF2-204ENST00000414978 COL4A3Q01955 1670 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 A0A0U1RQK1 487 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 FEZF1A0PJY2 475 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 ZNF320A2RRD8 509 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 A8MZ25 164 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 LIASO43766 372 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 CYP4B1P13584 511 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 FDPSP14324 419 aaKnown RBP2.64□□□□□ -1.99
MCF2-204ENST00000414978 TAL1P17542 331 aaPredicted RBP2.64□□□□□ -1.99
MCF2-204ENST00000414978 PI3P19957 117 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 FBLN1P23142 703 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 TYK2P29597 1187 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 AVPR2P30518 371 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 LIPAP38571 399 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 VIPR2P41587 438 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 AGTR2P50052 363 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 COPB1P53618 953 aaKnown RBP2.64□□□□□ -1.99
MCF2-204ENST00000414978 PRKCZQ05513 592 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 ALKBH1Q13686 389 aaKnown RBP2.64□□□□□ -1.99
MCF2-204ENST00000414978 MLANAQ16655 118 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 SUSD4Q5VX71 490 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 LIPMQ5VYY2 423 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 FAM111BQ6SJ93 734 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 B3GNT8Q7Z7M8 397 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 ADGRE4PQ86SQ3 457 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 ABI1Q8IZP0 508 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 EXD3Q8N9H8 876 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 ZBTB44Q8NCP5 570 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 SUN3Q8TAQ9 357 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 ATOH1Q92858 354 aaPredicted RBP2.64□□□□□ -1.99
MCF2-204ENST00000414978 SLC22A18Q96BI1 424 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 SLC7A6OSQ96CW6 309 aaPredicted RBP2.64□□□□□ -1.99
MCF2-204ENST00000414978 AK8Q96MA6 479 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 PTDSS2Q9BVG9 487 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 UTP14AQ9BVJ6 771 aaKnown RBP2.64□□□□□ -1.99
MCF2-204ENST00000414978 NT5C3AQ9H0P0 336 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 IKZF4Q9H2S9 585 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 PLK3Q9H4B4 646 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 SH3BP4Q9P0V3 963 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 SEPT10Q9P0V9 454 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 DKK3Q9UBP4 350 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 ARMCX3Q9UH62 379 aaPredicted RBP2.64□□□□□ -1.99
MCF2-204ENST00000414978 HEMK1Q9Y5R4 338 aaPredicted RBP2.64□□□□□ -1.99
MCF2-204ENST00000414978 CAPN7Q9Y6W3 813 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 SH3TC1Q8TE82 1336 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 DOCK3Q8IZD9 2030 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 A1L4Q6 167 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 PRAMEF2O60811 474 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 KERAO60938 352 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 PPP3CBP16298 524 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 ITGB5P18084 799 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 ATP5F1P24539 256 aaPredicted RBP2.64□□□□□ -1.99
MCF2-204ENST00000414978 FMO4P31512 558 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 TCF7P36402 384 aaPredicted RBP2.64□□□□□ -1.99
MCF2-204ENST00000414978 BUD31P41223 144 aaPredicted RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms