RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 SPATA5L1Q9BVQ7 753 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 MSI1O43347 362 aaKnown RBP12.01□□□□□ -0.49
PTPRF-205ENST00000414879 AVILO75366 819 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 CPSF4O95639 269 aaKnown RBP12.01□□□□□ -0.49
PTPRF-205ENST00000414879 PDHA1P08559 390 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 DNAJB1P25685 340 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 PLK1P53350 603 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 ZNF544Q6NX49 715 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 CHST9Q7L1S5 443 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 OTOP2Q7RTS6 562 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 KRT73Q86Y46 540 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 RP9Q8TA86 221 aaKnown RBP12.01□□□□□ -0.49
PTPRF-205ENST00000414879 DIS3LQ8TF46 1054 aaKnown RBP12.01□□□□□ -0.49
PTPRF-205ENST00000414879 USP6NLQ92738 828 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 AHCYL2Q96HN2 611 aaKnown RBP12.01□□□□□ -0.49
PTPRF-205ENST00000414879 ZNF514Q96K75 400 aaPredicted RBP12.01□□□□□ -0.49
PTPRF-205ENST00000414879 DACH2Q96NX9 599 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 BBS4Q96RK4 519 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 HEPHQ9BQS7 1158 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 SMOC2Q9H3U7 446 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 INTS10Q9NVR2 710 aaKnown RBP12.01□□□□□ -0.49
PTPRF-205ENST00000414879 TDRKHQ9Y2W6 561 aaKnown RBP12.01□□□□□ -0.49
PTPRF-205ENST00000414879 TIAM2Q8IVF5 1701 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 MAGEA13PA6NCF6 341 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 PIRO00625 290 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 ATG13O75143 517 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 OR4Q2P0C623 313 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 CAP1Q01518 475 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 PPIDQ08752 370 aaKnown RBP12.01□□□□□ -0.49
PTPRF-205ENST00000414879 ADGRD1Q6QNK2 874 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 CYP20A1Q6UW02 462 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 DEFB107AQ8IZN7 70 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 SLC35F5Q8WV83 523 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 LENG1Q96BZ8 264 aaPredicted RBP12.01□□□□□ -0.49
PTPRF-205ENST00000414879 FAM136AQ96C01 138 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 ABHD8Q96I13 439 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 SH3BP4Q9P0V3 963 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 PEX10O60683 326 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 OCM2P0CE71 109 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 OCMP0CE72 109 aaPredicted RBP12□□□□□ -0.49
PTPRF-205ENST00000414879 KCNA3P22001 575 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 CCT8P50990 548 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 PDE1CQ14123 709 aaPredicted RBP12□□□□□ -0.49
PTPRF-205ENST00000414879 RCN1Q15293 331 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 METTL21CQ5VZV1 264 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 KIAA0930Q6ICG6 404 aaPredicted RBP12□□□□□ -0.49
PTPRF-205ENST00000414879 KIAA1324Q6UXG2 1013 aaKnown RBP12□□□□□ -0.49
PTPRF-205ENST00000414879 CRYGNQ8WXF5 182 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 SPOCK2Q92563 424 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 LRRC4CQ9HCJ2 640 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 DUS2Q9NX74 493 aaKnown RBP12□□□□□ -0.49
PTPRF-205ENST00000414879 CPQQ9Y646 472 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 BBIP1A8MTZ0 92 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 EPN2O95208 641 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 LMO2P25791 158 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 ADSLP30566 484 aaPredicted RBP12□□□□□ -0.49
PTPRF-205ENST00000414879 ADGRF1Q5T601 910 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 IRAK1BP1Q5VVH5 260 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 SLC39A4Q6P5W5 647 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 OTUB2Q96DC9 234 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 CATSPER2Q96P56 530 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 C10orf88Q9H8K7 445 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 SLC25A14O95258 325 aaPredicted RBP12□□□□□ -0.49
PTPRF-205ENST00000414879 KCNH1O95259 989 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 ESR1P03372 595 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 IDO1P14902 403 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 GRIA4P48058 902 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 TTMPQ5BVD1 217 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 LLGL2Q6P1M3 1020 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 ANKS1BQ7Z6G8 1248 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 CYP4Z2PQ8N1L4 340 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 KLHL4Q9C0H6 718 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 MAN1C1Q9NR34 630 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 YJEFN3A6XGL0 299 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 UQCRBP14927 111 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 LIMK2P53671 638 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 RUNX1T1Q06455 604 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 LAPTM5Q13571 262 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 SPATA19Q7Z5L4 167 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 EXOC3L1Q86VI1 746 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 C7orf61Q8IZ16 206 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 SRFBP1Q8NEF9 429 aaKnown RBP12□□□□□ -0.49
PTPRF-205ENST00000414879 SLC35B2Q8TB61 432 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 MINDY3Q9H8M7 445 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 ZFP14Q9HCL3 533 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 PIH1D1Q9NWS0 290 aaKnown RBP12□□□□□ -0.49
PTPRF-205ENST00000414879 NUDT4Q9NZJ9 180 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 YIPF1Q9Y548 306 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 AP4S1Q9Y587 144 aa12□□□□□ -0.49
PTPRF-205ENST00000414879 FAM220BPB1ANY3 271 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 AZIN1O14977 448 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 SASH3O75995 380 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 SERPINA6P08185 405 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 PTGER3P43115 390 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 NUP107P57740 925 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 BNIP2Q12982 314 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 TAF1AQ15573 450 aaPredicted RBP11.99□□□□□ -0.49
PTPRF-205ENST00000414879 FUT11Q495W5 492 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 GPR33Q49SQ1 333 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 ANXA8L1Q5VT79 327 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms