RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 TEX44Q53QW1 395 aa25.43■■□□□ 1.66
CPNE1-207ENST00000414664 ZC3H18Q86VM9 953 aaKnown RBP25.43■■□□□ 1.66
CPNE1-207ENST00000414664 CNTD1Q8N815 330 aa25.43■■□□□ 1.66
CPNE1-207ENST00000414664 HAUS1Q96CS2 278 aa25.43■■□□□ 1.66
CPNE1-207ENST00000414664 HES6Q96HZ4 224 aa25.43■■□□□ 1.66
CPNE1-207ENST00000414664 BMFQ96LC9 184 aa25.43■■□□□ 1.66
CPNE1-207ENST00000414664 PACSIN2Q9UNF0 486 aaPredicted RBP25.43■■□□□ 1.66
CPNE1-207ENST00000414664 A0A1B0GTQ1 180 aa25.42■■□□□ 1.66
CPNE1-207ENST00000414664 RAD51BO15315 384 aa25.42■■□□□ 1.66
CPNE1-207ENST00000414664 ELFN1P0C7U0 828 aa25.42■■□□□ 1.66
CPNE1-207ENST00000414664 RABIFP47224 123 aa25.42■■□□□ 1.66
CPNE1-207ENST00000414664 EPHB1P54762 984 aa25.42■■□□□ 1.66
CPNE1-207ENST00000414664 NIPAL4Q0D2K0 466 aa25.42■■□□□ 1.66
CPNE1-207ENST00000414664 Q6ZSR6 202 aa25.42■■□□□ 1.66
CPNE1-207ENST00000414664 USP45Q70EL2 814 aa25.42■■□□□ 1.66
CPNE1-207ENST00000414664 PTAR1Q7Z6K3 402 aaPredicted RBP25.42■■□□□ 1.66
CPNE1-207ENST00000414664 SPATS2Q86XZ4 545 aaKnown RBP25.42■■□□□ 1.66
CPNE1-207ENST00000414664 OR13H1Q8NG92 308 aa25.42■■□□□ 1.66
CPNE1-207ENST00000414664 CENPTQ96BT3 561 aa25.42■■□□□ 1.66
CPNE1-207ENST00000414664 SCRN2Q96FV2 425 aa25.42■■□□□ 1.66
CPNE1-207ENST00000414664 AGAP3Q96P47 875 aa25.42■■□□□ 1.66
CPNE1-207ENST00000414664 ALS2CR12Q96Q35 445 aa25.42■■□□□ 1.66
CPNE1-207ENST00000414664 FERMT1Q9BQL6 677 aa25.42■■□□□ 1.66
CPNE1-207ENST00000414664 LZTFL1Q9NQ48 299 aa25.42■■□□□ 1.66
CPNE1-207ENST00000414664 B4GALT6Q9UBX8 382 aa25.42■■□□□ 1.66
CPNE1-207ENST00000414664 ASCC3Q8N3C0 2202 aaKnown RBP25.41■■□□□ 1.66
CPNE1-207ENST00000414664 TOR1BO14657 336 aa25.41■■□□□ 1.66
CPNE1-207ENST00000414664 DDX3YO15523 660 aaKnown RBP25.41■■□□□ 1.66
CPNE1-207ENST00000414664 PCDHGA12O60330 932 aa25.41■■□□□ 1.66
CPNE1-207ENST00000414664 FZD6O60353 706 aa25.41■■□□□ 1.66
CPNE1-207ENST00000414664 CEACAM1P13688 526 aa25.41■■□□□ 1.66
CPNE1-207ENST00000414664 VIPR1P32241 457 aa25.41■■□□□ 1.66
CPNE1-207ENST00000414664 RPL26P61254 145 aaKnown RBP25.41■■□□□ 1.66
CPNE1-207ENST00000414664 SEMG2Q02383 582 aa25.41■■□□□ 1.66
CPNE1-207ENST00000414664 RALGDSQ12967 914 aa25.41■■□□□ 1.66
CPNE1-207ENST00000414664 LRRC14Q15048 493 aa25.41■■□□□ 1.66
CPNE1-207ENST00000414664 AGERQ15109 404 aa25.41■■□□□ 1.66
CPNE1-207ENST00000414664 LIPIQ6XZB0 460 aa25.41■■□□□ 1.66
CPNE1-207ENST00000414664 B4GALNT4Q76KP1 1039 aa25.41■■□□□ 1.66
CPNE1-207ENST00000414664 PIH1D2Q8WWB5 315 aa25.41■■□□□ 1.66
CPNE1-207ENST00000414664 VAT1Q99536 393 aa25.41■■□□□ 1.66
CPNE1-207ENST00000414664 TDRD1Q9BXT4 1180 aaKnown RBP25.41■■□□□ 1.66
CPNE1-207ENST00000414664 CEP41Q9BYV8 373 aa25.41■■□□□ 1.66
CPNE1-207ENST00000414664 SLC25A51Q9H1U9 297 aa25.41■■□□□ 1.66
CPNE1-207ENST00000414664 RPL26L1Q9UNX3 145 aaKnown RBP25.41■■□□□ 1.66
CPNE1-207ENST00000414664 PPIL1Q9Y3C6 166 aa25.41■■□□□ 1.66
CPNE1-207ENST00000414664 TMEM131Q92545 1883 aa25.4■■□□□ 1.66
CPNE1-207ENST00000414664 KNL1Q8NG31 2342 aa25.4■■□□□ 1.66
CPNE1-207ENST00000414664 GOLGA6L9A6NEM1 432 aa25.4■■□□□ 1.66
CPNE1-207ENST00000414664 POM121BA6NF01 834 aa25.4■■□□□ 1.66
CPNE1-207ENST00000414664 H7C0C1 242 aa25.4■■□□□ 1.66
CPNE1-207ENST00000414664 KCNK5O95279 499 aa25.4■■□□□ 1.66
CPNE1-207ENST00000414664 PTPN3P26045 913 aa25.4■■□□□ 1.66
CPNE1-207ENST00000414664 CD86P42081 329 aa25.4■■□□□ 1.66
CPNE1-207ENST00000414664 ATP5OP48047 213 aa25.4■■□□□ 1.66
CPNE1-207ENST00000414664 RXRGP48443 463 aa25.4■■□□□ 1.66
CPNE1-207ENST00000414664 NOVA1P51513 510 aaKnown RBP25.4■■□□□ 1.66
CPNE1-207ENST00000414664 NOMO1Q15155 1222 aa25.4■■□□□ 1.66
CPNE1-207ENST00000414664 PPM1JQ5JR12 505 aa25.4■■□□□ 1.66
CPNE1-207ENST00000414664 PRAMEF14Q5SWL7 426 aa25.4■■□□□ 1.66
CPNE1-207ENST00000414664 PIP4P1Q86T03 277 aa25.4■■□□□ 1.66
CPNE1-207ENST00000414664 TP53I13Q8NBR0 393 aaPredicted RBP25.4■■□□□ 1.66
CPNE1-207ENST00000414664 TEKT5Q96M29 485 aa25.4■■□□□ 1.66
CPNE1-207ENST00000414664 QKIQ96PU8 341 aaKnown RBP eCLIP25.4■■□□□ 1.666e-7■■■□□ 15.2
CPNE1-207ENST00000414664 MCCC1Q96RQ3 725 aaPredicted RBP25.4■■□□□ 1.66
CPNE1-207ENST00000414664 PCDH9Q9HC56 1237 aa25.4■■□□□ 1.66
CPNE1-207ENST00000414664 KCTD5Q9NXV2 234 aa25.4■■□□□ 1.66
CPNE1-207ENST00000414664 CHKBQ9Y259 395 aa25.4■■□□□ 1.66
CPNE1-207ENST00000414664 COQ6Q9Y2Z9 468 aa25.4■■□□□ 1.66
CPNE1-207ENST00000414664 TP53BP1Q12888 1972 aaPredicted RBP25.39■■□□□ 1.66
CPNE1-207ENST00000414664 A8MX80 341 aa25.39■■□□□ 1.66
CPNE1-207ENST00000414664 FLRT2O43155 660 aa25.39■■□□□ 1.66
CPNE1-207ENST00000414664 PDHA1P08559 390 aa25.39■■□□□ 1.66
CPNE1-207ENST00000414664 PFN3P60673 137 aa25.39■■□□□ 1.66
CPNE1-207ENST00000414664 YPEL5P62699 121 aa25.39■■□□□ 1.66
CPNE1-207ENST00000414664 SKOR1P84550 965 aa25.39■■□□□ 1.66
CPNE1-207ENST00000414664 ZNF211Q13398 564 aaPredicted RBP25.39■■□□□ 1.66
CPNE1-207ENST00000414664 ARHGEF7Q14155 803 aa25.39■■□□□ 1.66
CPNE1-207ENST00000414664 INAVAQ3KP66 663 aa25.39■■□□□ 1.66
CPNE1-207ENST00000414664 DBX2Q6ZNG2 339 aa25.39■■□□□ 1.66
CPNE1-207ENST00000414664 NAXDQ8IW45 347 aa25.39■■□□□ 1.66
CPNE1-207ENST00000414664 TTC13Q8NBP0 860 aa25.39■■□□□ 1.66
CPNE1-207ENST00000414664 DEFB124Q8NES8 71 aa25.39■■□□□ 1.66
CPNE1-207ENST00000414664 ACTL9Q8TC94 416 aa25.39■■□□□ 1.66
CPNE1-207ENST00000414664 SETD7Q8WTS6 366 aaKnown RBP25.39■■□□□ 1.66
CPNE1-207ENST00000414664 HTR3CQ8WXA8 447 aa25.39■■□□□ 1.66
CPNE1-207ENST00000414664 IMP4Q96G21 291 aaKnown RBP25.39■■□□□ 1.66
CPNE1-207ENST00000414664 GLOD4Q9HC38 313 aa25.39■■□□□ 1.66
CPNE1-207ENST00000414664 DNPEPQ9ULA0 475 aa25.39■■□□□ 1.66
CPNE1-207ENST00000414664 PPP2R2CQ9Y2T4 447 aa25.39■■□□□ 1.66
CPNE1-207ENST00000414664 SH3BP5O60239 455 aa25.38■■□□□ 1.65
CPNE1-207ENST00000414664 ZNF189O75820 626 aaPredicted RBP25.38■■□□□ 1.65
CPNE1-207ENST00000414664 MMP2P08253 660 aa25.38■■□□□ 1.65
CPNE1-207ENST00000414664 KCNA4P22459 653 aa25.38■■□□□ 1.65
CPNE1-207ENST00000414664 OTUD4Q01804 1114 aaKnown RBP25.38■■□□□ 1.65
CPNE1-207ENST00000414664 PTK2BQ14289 1009 aa25.38■■□□□ 1.65
CPNE1-207ENST00000414664 IHHQ14623 411 aa25.38■■□□□ 1.65
CPNE1-207ENST00000414664 SLC14A2Q15849 920 aa25.38■■□□□ 1.65
CPNE1-207ENST00000414664 AADACL2Q6P093 401 aa25.38■■□□□ 1.65
CPNE1-207ENST00000414664 CDKL3Q8IVW4 592 aaPredicted RBP25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms